RNA–Protein interactions for RNA: ENST00000521590.5

SDC2-206, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-206ENST00000521590 ZNF112Q9UJU3 913 aa6.59□□□□□ -1.35
SDC2-206ENST00000521590 COG5Q9UP83 839 aa6.59□□□□□ -1.35
SDC2-206ENST00000521590 SLC45A1Q9Y2W3 748 aa6.59□□□□□ -1.35
SDC2-206ENST00000521590 FCF1Q9Y324 198 aaKnown RBP6.59□□□□□ -1.35
SDC2-206ENST00000521590 ATRXP46100 2492 aa6.59□□□□□ -1.35
SDC2-206ENST00000521590 BRWD1Q9NSI6 2320 aa6.58□□□□□ -1.36
SDC2-206ENST00000521590 A0A0G2JLL6 359 aaPredicted RBP6.58□□□□□ -1.36
SDC2-206ENST00000521590 DNM1LO00429 736 aa6.58□□□□□ -1.36
SDC2-206ENST00000521590 XRCC5P13010 732 aaKnown RBP6.58□□□□□ -1.36
SDC2-206ENST00000521590 ALADP13716 330 aa6.58□□□□□ -1.36
SDC2-206ENST00000521590 CYP2B6P20813 491 aa6.58□□□□□ -1.36
SDC2-206ENST00000521590 TRIM28Q13263 835 aaKnown RBP6.58□□□□□ -1.36
SDC2-206ENST00000521590 FAM110CQ1W6H9 321 aa6.58□□□□□ -1.36
SDC2-206ENST00000521590 TRIM60Q495X7 471 aa6.58□□□□□ -1.36
SDC2-206ENST00000521590 MORN1Q5T089 497 aa6.58□□□□□ -1.36
SDC2-206ENST00000521590 LCE2CQ5TA81 110 aa6.58□□□□□ -1.36
SDC2-206ENST00000521590 C16orf59Q7L2K0 433 aa6.58□□□□□ -1.36
SDC2-206ENST00000521590 PRRT2Q7Z6L0 340 aaPredicted RBP6.58□□□□□ -1.36
SDC2-206ENST00000521590 METTL3Q86U44 580 aaKnown RBP6.58□□□□□ -1.36
SDC2-206ENST00000521590 DZIP1LQ8IYY4 767 aaKnown RBP6.58□□□□□ -1.36
SDC2-206ENST00000521590 MICALL1Q8N3F8 863 aa6.58□□□□□ -1.36
SDC2-206ENST00000521590 CCDC85AQ96PX6 553 aaPredicted RBP6.58□□□□□ -1.36
SDC2-206ENST00000521590 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.58□□□□□ -1.361e-15■□□□□ 8.5
SDC2-206ENST00000521590 PRDM9Q9NQV7 894 aa6.58□□□□□ -1.36
SDC2-206ENST00000521590 BSDC1Q9NW68 430 aaPredicted RBP6.58□□□□□ -1.36
SDC2-206ENST00000521590 LEMD3Q9Y2U8 911 aa6.58□□□□□ -1.36
SDC2-206ENST00000521590 LOC285556D6RIA3 1793 aa6.58□□□□□ -1.36
SDC2-206ENST00000521590 FRYLO94915 3013 aa6.58□□□□□ -1.36
SDC2-206ENST00000521590 COL4A6Q14031 1691 aa6.58□□□□□ -1.36
SDC2-206ENST00000521590 MED19A0JLT2 244 aaPredicted RBP6.57□□□□□ -1.36
SDC2-206ENST00000521590 WFS1O76024 890 aa6.57□□□□□ -1.36
SDC2-206ENST00000521590 EIF2S2P20042 333 aaKnown RBP6.57□□□□□ -1.36
SDC2-206ENST00000521590 TNNI2P48788 182 aa6.57□□□□□ -1.36
SDC2-206ENST00000521590 TCF15Q12870 199 aa6.57□□□□□ -1.36
SDC2-206ENST00000521590 NFX1Q12986 1120 aaKnown RBP6.57□□□□□ -1.36
SDC2-206ENST00000521590 SKIV2LQ15477 1246 aaKnown RBP6.57□□□□□ -1.36
SDC2-206ENST00000521590 CCL14Q16627 93 aa6.57□□□□□ -1.36
SDC2-206ENST00000521590 CCDC152Q4G0S7 254 aa6.57□□□□□ -1.36
SDC2-206ENST00000521590 MIGA2Q7L4E1 593 aa6.57□□□□□ -1.36
SDC2-206ENST00000521590 FASTKD5Q7L8L6 764 aaKnown RBP6.57□□□□□ -1.36
SDC2-206ENST00000521590 FAM178BQ8IXR5 827 aa6.57□□□□□ -1.36
SDC2-206ENST00000521590 GJD3Q8N144 294 aa6.57□□□□□ -1.36
SDC2-206ENST00000521590 SMCR8Q8TEV9 937 aaPredicted RBP6.57□□□□□ -1.36
SDC2-206ENST00000521590 PNISRQ8TF01 805 aaKnown RBP6.57□□□□□ -1.36
SDC2-206ENST00000521590 USP6NLQ92738 828 aa6.57□□□□□ -1.36
SDC2-206ENST00000521590 CNTNAP3BQ96NU0 1288 aa6.57□□□□□ -1.36
SDC2-206ENST00000521590 CNTNAP3Q9BZ76 1288 aa6.57□□□□□ -1.36
SDC2-206ENST00000521590 ALG13Q9NP73 1137 aaKnown RBP6.57□□□□□ -1.36
SDC2-206ENST00000521590 SERPINA10Q9UK55 444 aa6.57□□□□□ -1.36
SDC2-206ENST00000521590 MTCH2Q9Y6C9 303 aa6.57□□□□□ -1.36
SDC2-206ENST00000521590 PTPRZ1P23471 2315 aaPredicted RBP6.57□□□□□ -1.36
SDC2-206ENST00000521590 ZNF292O60281 2723 aa6.57□□□□□ -1.36
SDC2-206ENST00000521590 DOCK1Q14185 1865 aa6.56□□□□□ -1.36
SDC2-206ENST00000521590 SEMA3EO15041 775 aa6.56□□□□□ -1.36
SDC2-206ENST00000521590 KIAA0355O15063 1070 aa6.56□□□□□ -1.36
SDC2-206ENST00000521590 AXIN1O15169 862 aa6.56□□□□□ -1.36
SDC2-206ENST00000521590 OATP04181 439 aa6.56□□□□□ -1.36
SDC2-206ENST00000521590 IL1R1P14778 569 aa6.56□□□□□ -1.36
SDC2-206ENST00000521590 FECHP22830 423 aa6.56□□□□□ -1.36
SDC2-206ENST00000521590 ID4P47928 161 aa6.56□□□□□ -1.36
SDC2-206ENST00000521590 CACNB3P54284 484 aa6.56□□□□□ -1.36
SDC2-206ENST00000521590 FPGSQ05932 587 aa6.56□□□□□ -1.36
SDC2-206ENST00000521590 FUT2Q10981 343 aa6.56□□□□□ -1.36
SDC2-206ENST00000521590 NOL9Q5SY16 702 aaKnown RBP6.56□□□□□ -1.36
SDC2-206ENST00000521590 C1orf53Q5VUE5 145 aa6.56□□□□□ -1.36
SDC2-206ENST00000521590 CCDC129Q6ZRS4 1044 aa6.56□□□□□ -1.36
SDC2-206ENST00000521590 CYP4X1Q8N118 509 aa6.56□□□□□ -1.36
SDC2-206ENST00000521590 PLBD2Q8NHP8 589 aa6.56□□□□□ -1.36
SDC2-206ENST00000521590 LPAR1Q92633 364 aa6.56□□□□□ -1.36
SDC2-206ENST00000521590 HLA-CQ95604 372 aa6.56□□□□□ -1.36
SDC2-206ENST00000521590 ZNF341Q9BYN7 854 aa6.56□□□□□ -1.36
SDC2-206ENST00000521590 NKX2-4Q9H2Z4 354 aa6.56□□□□□ -1.36
SDC2-206ENST00000521590 YBX2Q9Y2T7 364 aaKnown RBP6.56□□□□□ -1.36
SDC2-206ENST00000521590 TACC3Q9Y6A5 838 aa6.56□□□□□ -1.36
SDC2-206ENST00000521590 SMCHD1A6NHR9 2005 aa6.55□□□□□ -1.36
SDC2-206ENST00000521590 TECTAO75443 2155 aa6.55□□□□□ -1.36
SDC2-206ENST00000521590 SNAP23O00161 211 aa6.55□□□□□ -1.36
SDC2-206ENST00000521590 RFXAPO00287 272 aa6.55□□□□□ -1.36
SDC2-206ENST00000521590 PDE8AO60658 829 aa6.55□□□□□ -1.36
SDC2-206ENST00000521590 SMCPP49901 116 aaPredicted RBP6.55□□□□□ -1.36
SDC2-206ENST00000521590 TLE2Q04725 743 aa6.55□□□□□ -1.36
SDC2-206ENST00000521590 TMEM240Q5SV17 173 aa6.55□□□□□ -1.36
SDC2-206ENST00000521590 GJC2Q5T442 439 aaPredicted RBP6.55□□□□□ -1.36
SDC2-206ENST00000521590 KRT40Q6A162 431 aa6.55□□□□□ -1.36
SDC2-206ENST00000521590 GADL1Q6ZQY3 521 aa6.55□□□□□ -1.36
SDC2-206ENST00000521590 FAM83AQ86UY5 434 aa6.55□□□□□ -1.36
SDC2-206ENST00000521590 NLRP7Q8WX94 980 aa6.55□□□□□ -1.36
SDC2-206ENST00000521590 POLR3GLQ9BT43 218 aa6.55□□□□□ -1.36
SDC2-206ENST00000521590 SLC28A3Q9HAS3 691 aa6.55□□□□□ -1.36
SDC2-206ENST00000521590 FAM86C1Q9NVL1 165 aa6.55□□□□□ -1.36
SDC2-206ENST00000521590 JAG2Q9Y219 1238 aa6.55□□□□□ -1.36
SDC2-206ENST00000521590 SLC27A5Q9Y2P5 690 aa6.55□□□□□ -1.36
SDC2-206ENST00000521590 AFG3L2Q9Y4W6 797 aa6.55□□□□□ -1.36
SDC2-206ENST00000521590 ATRNL1Q5VV63 1379 aa6.55□□□□□ -1.36
SDC2-206ENST00000521590 DOCK2Q92608 1830 aa6.55□□□□□ -1.36
SDC2-206ENST00000521590 ASPMQ8IZT6 3477 aa6.55□□□□□ -1.36
SDC2-206ENST00000521590 DCXO43602 365 aa6.54□□□□□ -1.36
SDC2-206ENST00000521590 RAG1P15918 1043 aa6.54□□□□□ -1.36
SDC2-206ENST00000521590 ZKSCAN1P17029 563 aaPredicted RBP6.54□□□□□ -1.36
SDC2-206ENST00000521590 CRKP46108 304 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms