RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 UNC93B1Q9H1C4 597 aa31.25■■■□□ 2.59
LAPTM4B-203ENST00000521545 SWAP70Q9UH65 585 aa31.25■■■□□ 2.59
LAPTM4B-203ENST00000521545 MKI67P46013 3256 aaKnown RBP31.25■■■□□ 2.59
LAPTM4B-203ENST00000521545 PRKAB2O43741 272 aa31.24■■■□□ 2.59
LAPTM4B-203ENST00000521545 DOCK3Q8IZD9 2030 aa31.24■■■□□ 2.59
LAPTM4B-203ENST00000521545 DDX60LQ5H9U9 1706 aaKnown RBP31.24■■■□□ 2.59
LAPTM4B-203ENST00000521545 CYP2D6P10635 497 aa31.23■■■□□ 2.59
LAPTM4B-203ENST00000521545 SEPT2Q15019 361 aa31.23■■■□□ 2.59
LAPTM4B-203ENST00000521545 ACER1Q8TDN7 264 aa31.23■■■□□ 2.59
LAPTM4B-203ENST00000521545 SHISA4Q96DD7 197 aa31.23■■■□□ 2.59
LAPTM4B-203ENST00000521545 PAGR1Q9BTK6 254 aa31.23■■■□□ 2.59
LAPTM4B-203ENST00000521545 TXNRD2Q9NNW7 524 aa31.23■■■□□ 2.59
LAPTM4B-203ENST00000521545 RBPJLQ9UBG7 517 aa31.23■■■□□ 2.59
LAPTM4B-203ENST00000521545 EVX2Q03828 476 aa31.22■■■□□ 2.59
LAPTM4B-203ENST00000521545 GJD2Q9UKL4 321 aa31.22■■■□□ 2.59
LAPTM4B-203ENST00000521545 MAPK4P31152 587 aa31.21■■■□□ 2.59
LAPTM4B-203ENST00000521545 GUCY1A2P33402 732 aa31.21■■■□□ 2.59
LAPTM4B-203ENST00000521545 ERVK-9P63128 1117 aa31.21■■■□□ 2.59
LAPTM4B-203ENST00000521545 ERVK-24P63145 666 aa31.21■■■□□ 2.59
LAPTM4B-203ENST00000521545 U2AF1L4Q8WU68 220 aaKnown RBP31.21■■■□□ 2.59
LAPTM4B-203ENST00000521545 GCC1Q96CN9 775 aa31.21■■■□□ 2.59
LAPTM4B-203ENST00000521545 SLC4A4Q9Y6R1 1079 aa31.21■■■□□ 2.59
LAPTM4B-203ENST00000521545 CHGBP05060 677 aa31.2■■■□□ 2.59
LAPTM4B-203ENST00000521545 CATSPERGQ6ZRH7 1159 aa31.2■■■□□ 2.59
LAPTM4B-203ENST00000521545 DYNLL2Q96FJ2 89 aa31.2■■■□□ 2.59
LAPTM4B-203ENST00000521545 PEX10O60683 326 aa31.19■■■□□ 2.58
LAPTM4B-203ENST00000521545 SGPL1O95470 568 aa31.19■■■□□ 2.58
LAPTM4B-203ENST00000521545 CAPN2P17655 700 aa31.19■■■□□ 2.58
LAPTM4B-203ENST00000521545 VCAM1P19320 739 aa31.19■■■□□ 2.58
LAPTM4B-203ENST00000521545 TMEM179Q6ZVK1 233 aa31.19■■■□□ 2.58
LAPTM4B-203ENST00000521545 NUDT12Q9BQG2 462 aa31.19■■■□□ 2.58
LAPTM4B-203ENST00000521545 CWC22Q9HCG8 908 aaKnown RBP31.19■■■□□ 2.58
LAPTM4B-203ENST00000521545 RABGAP1Q9Y3P9 1069 aa31.19■■■□□ 2.58
LAPTM4B-203ENST00000521545 MYH7P12883 1935 aa31.18■■■□□ 2.58
LAPTM4B-203ENST00000521545 USP17L12C9JPN9 530 aa31.18■■■□□ 2.58
LAPTM4B-203ENST00000521545 USP17L21D6R901 530 aa31.18■■■□□ 2.58
LAPTM4B-203ENST00000521545 HMGCRP04035 888 aa31.18■■■□□ 2.58
LAPTM4B-203ENST00000521545 RRP1P56182 461 aaKnown RBP31.18■■■□□ 2.58
LAPTM4B-203ENST00000521545 Q3C1V9 767 aa31.18■■■□□ 2.58
LAPTM4B-203ENST00000521545 C12orf60Q5U649 245 aa31.18■■■□□ 2.58
LAPTM4B-203ENST00000521545 SLC44A5Q8NCS7 719 aa31.18■■■□□ 2.58
LAPTM4B-203ENST00000521545 PUS7LQ9H0K6 701 aaKnown RBP31.18■■■□□ 2.58
LAPTM4B-203ENST00000521545 PCDHB15Q9Y5E8 787 aa31.18■■■□□ 2.58
LAPTM4B-203ENST00000521545 TFRCP02786 760 aaKnown RBP31.17■■■□□ 2.58
LAPTM4B-203ENST00000521545 KBTBD3Q8NAB2 608 aa31.17■■■□□ 2.58
LAPTM4B-203ENST00000521545 SOCS4Q8WXH5 440 aa31.17■■■□□ 2.58
LAPTM4B-203ENST00000521545 DEFB118Q96PH6 123 aa31.17■■■□□ 2.58
LAPTM4B-203ENST00000521545 SLC34A2O95436 690 aa31.16■■■□□ 2.58
LAPTM4B-203ENST00000521545 CCNA1P78396 465 aa31.16■■■□□ 2.58
LAPTM4B-203ENST00000521545 CCDC17Q96LX7 622 aa31.16■■■□□ 2.58
LAPTM4B-203ENST00000521545 RPAP3Q9H6T3 665 aaPredicted RBP31.16■■■□□ 2.58
LAPTM4B-203ENST00000521545 CYP2B6P20813 491 aa31.15■■■□□ 2.58
LAPTM4B-203ENST00000521545 CDK8P49336 464 aa31.15■■■□□ 2.58
LAPTM4B-203ENST00000521545 TSHZ3Q63HK5 1081 aa31.15■■■□□ 2.58
LAPTM4B-203ENST00000521545 CYP2D7A0A087X1C5 515 aa31.14■■■□□ 2.58
LAPTM4B-203ENST00000521545 PLEKHH3Q7Z736 793 aa31.14■■■□□ 2.58
LAPTM4B-203ENST00000521545 PORCNQ9H237 461 aa31.14■■■□□ 2.58
LAPTM4B-203ENST00000521545 ARHGEF10LQ9HCE6 1279 aa31.14■■■□□ 2.58
LAPTM4B-203ENST00000521545 PAK6Q9NQU5 681 aaPredicted RBP31.14■■■□□ 2.58
LAPTM4B-203ENST00000521545 BAZ2AQ9UIF9 1905 aaKnown RBP31.14■■■□□ 2.57
LAPTM4B-203ENST00000521545 A0A1W2PRG0 241 aa31.13■■■□□ 2.57
LAPTM4B-203ENST00000521545 FARP2O94887 1054 aaPredicted RBP31.13■■■□□ 2.57
LAPTM4B-203ENST00000521545 ZFYP08048 801 aaPredicted RBP31.13■■■□□ 2.57
LAPTM4B-203ENST00000521545 LRRFIP1Q32MZ4 808 aaKnown RBP31.13■■■□□ 2.57
LAPTM4B-203ENST00000521545 GPR142Q7Z601 462 aa31.13■■■□□ 2.57
LAPTM4B-203ENST00000521545 TRMT44Q8IYL2 757 aaKnown RBP31.13■■■□□ 2.57
LAPTM4B-203ENST00000521545 DPF3Q92784 378 aa31.13■■■□□ 2.57
LAPTM4B-203ENST00000521545 STRBPQ96SI9 672 aaKnown RBP31.13■■■□□ 2.57
LAPTM4B-203ENST00000521545 HTATIP2Q9BUP3 242 aa31.13■■■□□ 2.57
LAPTM4B-203ENST00000521545 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.13■■■□□ 2.57
LAPTM4B-203ENST00000521545 ERC2O15083 957 aa31.12■■■□□ 2.57
LAPTM4B-203ENST00000521545 RNF113AO15541 343 aaKnown RBP31.12■■■□□ 2.57
LAPTM4B-203ENST00000521545 GLRX3O76003 335 aaKnown RBP31.12■■■□□ 2.57
LAPTM4B-203ENST00000521545 XRCC5P13010 732 aaKnown RBP31.12■■■□□ 2.57
LAPTM4B-203ENST00000521545 AKR1B1P15121 316 aa31.12■■■□□ 2.57
LAPTM4B-203ENST00000521545 CTR9Q6PD62 1173 aa31.12■■■□□ 2.57
LAPTM4B-203ENST00000521545 POTEEQ6S8J3 1075 aa31.12■■■□□ 2.57
LAPTM4B-203ENST00000521545 LBX2Q6XYB7 198 aa31.12■■■□□ 2.57
LAPTM4B-203ENST00000521545 C16orf86Q6ZW13 317 aa31.12■■■□□ 2.57
LAPTM4B-203ENST00000521545 SH2D4AQ9H788 454 aa31.12■■■□□ 2.57
LAPTM4B-203ENST00000521545 HMX1Q9NP08 348 aaPredicted RBP31.12■■■□□ 2.57
LAPTM4B-203ENST00000521545 ZBTB47Q9UFB7 747 aaPredicted RBP31.12■■■□□ 2.57
LAPTM4B-203ENST00000521545 TTC41PQ6P2S7 1318 aa31.12■■■□□ 2.57
LAPTM4B-203ENST00000521545 ICA1Q05084 483 aa31.11■■■□□ 2.57
LAPTM4B-203ENST00000521545 UBE2Q1Q7Z7E8 422 aa31.11■■■□□ 2.57
LAPTM4B-203ENST00000521545 RPTORQ8N122 1335 aa31.11■■■□□ 2.57
LAPTM4B-203ENST00000521545 APPBP2Q92624 585 aa31.11■■■□□ 2.57
LAPTM4B-203ENST00000521545 HOXC10Q9NYD6 342 aa31.11■■■□□ 2.57
LAPTM4B-203ENST00000521545 ARPP21Q9UBL0 812 aaPredicted RBP31.11■■■□□ 2.57
LAPTM4B-203ENST00000521545 CNMDO75829 334 aa31.1■■■□□ 2.57
LAPTM4B-203ENST00000521545 RGS2P41220 211 aa31.1■■■□□ 2.57
LAPTM4B-203ENST00000521545 COG2Q14746 738 aa31.1■■■□□ 2.57
LAPTM4B-203ENST00000521545 WDR78Q5VTH9 848 aa31.1■■■□□ 2.57
LAPTM4B-203ENST00000521545 TANGO6Q9C0B7 1094 aa31.1■■■□□ 2.57
LAPTM4B-203ENST00000521545 MYH8P13535 1937 aa31.1■■■□□ 2.57
LAPTM4B-203ENST00000521545 SPDYE16A6NNV3 312 aaPredicted RBP31.09■■■□□ 2.57
LAPTM4B-203ENST00000521545 MORN1Q5T089 497 aa31.09■■■□□ 2.57
LAPTM4B-203ENST00000521545 GIMAP6Q6P9H5 292 aa31.09■■■□□ 2.57
LAPTM4B-203ENST00000521545 TRIB2Q92519 343 aa31.09■■■□□ 2.57
LAPTM4B-203ENST00000521545 LPAR1Q92633 364 aa31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms