RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-222ENST00000520400 RAG1P15918 1043 aa7.09□□□□□ -1.27
CTNNA1-222ENST00000520400 DIEXFQ68CQ4 756 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-222ENST00000520400 INTS3Q68E01 1043 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-222ENST00000520400 PRR23CQ6ZRP0 262 aa7.09□□□□□ -1.27
CTNNA1-222ENST00000520400 CDH24Q86UP0 819 aa7.09□□□□□ -1.27
CTNNA1-222ENST00000520400 TMEM151AQ8N4L1 468 aa7.09□□□□□ -1.27
CTNNA1-222ENST00000520400 TOP6BLQ8N6T0 577 aa7.09□□□□□ -1.27
CTNNA1-222ENST00000520400 C19orf47Q8N9M1 422 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-222ENST00000520400 KCT2Q8NC54 265 aa7.09□□□□□ -1.27
CTNNA1-222ENST00000520400 OR6P1Q8NGX9 317 aa7.09□□□□□ -1.27
CTNNA1-222ENST00000520400 CYB5D2Q8WUJ1 264 aa7.09□□□□□ -1.27
CTNNA1-222ENST00000520400 KLHL6Q8WZ60 621 aa7.09□□□□□ -1.27
CTNNA1-222ENST00000520400 VWCEQ96DN2 955 aa7.09□□□□□ -1.27
CTNNA1-222ENST00000520400 ZNF512BQ96KM6 892 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-222ENST00000520400 MIPEPQ99797 713 aa7.09□□□□□ -1.27
CTNNA1-222ENST00000520400 FAM83CQ9BQN1 747 aa7.09□□□□□ -1.27
CTNNA1-222ENST00000520400 DUSP23Q9BVJ7 150 aa7.09□□□□□ -1.27
CTNNA1-222ENST00000520400 ACTR10Q9NZ32 417 aa7.09□□□□□ -1.27
CTNNA1-222ENST00000520400 YARSP54577 528 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-222ENST00000520400 LETMD1Q6P1Q0 360 aa7.08□□□□□ -1.28
CTNNA1-222ENST00000520400 CLEC10AQ8IUN9 316 aa7.08□□□□□ -1.28
CTNNA1-222ENST00000520400 CKAP2LQ8IYA6 745 aa7.08□□□□□ -1.28
CTNNA1-222ENST00000520400 PHACTR4Q8IZ21 702 aa7.08□□□□□ -1.28
CTNNA1-222ENST00000520400 SLC6A18Q96N87 628 aa7.08□□□□□ -1.28
CTNNA1-222ENST00000520400 HIRIP3Q9BW71 556 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-222ENST00000520400 PRDM10Q9NQV6 1147 aa7.08□□□□□ -1.28
CTNNA1-222ENST00000520400 FAM86C1Q9NVL1 165 aa7.08□□□□□ -1.28
CTNNA1-222ENST00000520400 RAXQ9Y2V3 346 aa7.08□□□□□ -1.28
CTNNA1-222ENST00000520400 FAM170BA6NMN3 283 aa7.07□□□□□ -1.28
CTNNA1-222ENST00000520400 GJB6O95452 261 aa7.07□□□□□ -1.28
CTNNA1-222ENST00000520400 MAP7Q14244 749 aa7.07□□□□□ -1.28
CTNNA1-222ENST00000520400 RASA3Q14644 834 aa7.07□□□□□ -1.28
CTNNA1-222ENST00000520400 RSPO4Q2I0M5 234 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-222ENST00000520400 NKAPLQ5M9Q1 402 aa7.07□□□□□ -1.28
CTNNA1-222ENST00000520400 TDRD10Q5VZ19 366 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-222ENST00000520400 LARP1BQ659C4 914 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-222ENST00000520400 C6orf15Q6UXA7 325 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-222ENST00000520400 CCDC74BQ96LY2 380 aa7.07□□□□□ -1.28
CTNNA1-222ENST00000520400 HEXIM2Q96MH2 286 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-222ENST00000520400 SPOCK3Q9BQ16 436 aa7.07□□□□□ -1.28
CTNNA1-222ENST00000520400 MSRB2Q9Y3D2 182 aa7.07□□□□□ -1.28
CTNNA1-222ENST00000520400 PRR33A8MZF0 331 aa7.06□□□□□ -1.28
CTNNA1-222ENST00000520400 LRRN2O75325 713 aa7.06□□□□□ -1.28
CTNNA1-222ENST00000520400 F13BP05160 661 aa7.06□□□□□ -1.28
CTNNA1-222ENST00000520400 FAM87AP0C7U9 286 aa7.06□□□□□ -1.28
CTNNA1-222ENST00000520400 MLECQ14165 292 aa7.06□□□□□ -1.28
CTNNA1-222ENST00000520400 BMS1Q14692 1282 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-222ENST00000520400 DDR2Q16832 855 aa7.06□□□□□ -1.28
CTNNA1-222ENST00000520400 TNNI3KQ59H18 835 aa7.06□□□□□ -1.28
CTNNA1-222ENST00000520400 MFSD2AQ8NA29 543 aa7.06□□□□□ -1.28
CTNNA1-222ENST00000520400 MFSD14AQ96MC6 490 aa7.06□□□□□ -1.28
CTNNA1-222ENST00000520400 OSBPL2Q9H1P3 480 aa7.06□□□□□ -1.28
CTNNA1-222ENST00000520400 ZNF214Q9UL59 606 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-222ENST00000520400 GIMAP6Q6P9H5 292 aa7.05□□□□□ -1.28
CTNNA1-222ENST00000520400 PAOXQ6QHF9 649 aa7.05□□□□□ -1.28
CTNNA1-222ENST00000520400 ZNF765Q7L2R6 523 aa7.05□□□□□ -1.28
CTNNA1-222ENST00000520400 ZAR1Q86SH2 424 aa7.05□□□□□ -1.28
CTNNA1-222ENST00000520400 SUSD2Q9UGT4 822 aa7.05□□□□□ -1.28
CTNNA1-222ENST00000520400 CEP131Q9UPN4 1083 aa7.05□□□□□ -1.28
CTNNA1-222ENST00000520400 SHOXO15266 292 aa7.04□□□□□ -1.28
CTNNA1-222ENST00000520400 AXDND1Q5T1B0 1012 aaPredicted RBP7.04□□□□□ -1.28
CTNNA1-222ENST00000520400 NBPF6Q5VWK0 638 aa7.04□□□□□ -1.28
CTNNA1-222ENST00000520400 FBXL6Q8N531 539 aa7.04□□□□□ -1.28
CTNNA1-222ENST00000520400 NBPF4Q96M43 638 aa7.04□□□□□ -1.28
CTNNA1-222ENST00000520400 Q96M66 194 aa7.04□□□□□ -1.28
CTNNA1-222ENST00000520400 KREMEN1Q96MU8 473 aa7.04□□□□□ -1.28
CTNNA1-222ENST00000520400 TBC1D32Q96NH3 1257 aa7.04□□□□□ -1.28
CTNNA1-222ENST00000520400 YIPF2Q9BWQ6 316 aa7.04□□□□□ -1.28
CTNNA1-222ENST00000520400 ZSWIM4Q9H7M6 989 aa7.04□□□□□ -1.28
CTNNA1-222ENST00000520400 SNTG2Q9NY99 539 aa7.04□□□□□ -1.28
CTNNA1-222ENST00000520400 STOML1Q9UBI4 398 aa7.04□□□□□ -1.28
CTNNA1-222ENST00000520400 SUCOQ9UBS9 1254 aaKnown RBP7.04□□□□□ -1.28
CTNNA1-222ENST00000520400 MAPK8IP1Q9UQF2 711 aa7.04□□□□□ -1.28
CTNNA1-222ENST00000520400 CCDC85CA6NKD9 419 aa7.03□□□□□ -1.28
CTNNA1-222ENST00000520400 K7ELQ4 463 aaPredicted RBP7.03□□□□□ -1.28
CTNNA1-222ENST00000520400 CBFA2T2O43439 604 aa7.03□□□□□ -1.28
CTNNA1-222ENST00000520400 TP53P04637 393 aaPredicted RBP7.03□□□□□ -1.28
CTNNA1-222ENST00000520400 GBP1P32455 592 aa7.03□□□□□ -1.28
CTNNA1-222ENST00000520400 PMS1P54277 932 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-222ENST00000520400 SNW1Q13573 536 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-222ENST00000520400 NBPF12Q5TAG4 269 aaPredicted RBP7.03□□□□□ -1.28
CTNNA1-222ENST00000520400 DCAF15Q66K64 600 aa7.03□□□□□ -1.28
CTNNA1-222ENST00000520400 RNF43Q68DV7 783 aa7.03□□□□□ -1.28
CTNNA1-222ENST00000520400 FAM178BQ8IXR5 827 aa7.03□□□□□ -1.28
CTNNA1-222ENST00000520400 LGR4Q9BXB1 951 aa7.03□□□□□ -1.28
CTNNA1-222ENST00000520400 TRIM55Q9BYV6 548 aa7.03□□□□□ -1.28
CTNNA1-222ENST00000520400 KANSL2Q9H9L4 492 aa7.03□□□□□ -1.28
CTNNA1-222ENST00000520400 CDK11AQ9UQ88 783 aaPredicted RBP7.03□□□□□ -1.28
CTNNA1-222ENST00000520400 ITGB7P26010 798 aa7.02□□□□□ -1.29
CTNNA1-222ENST00000520400 KIAA1211LQ6NV74 962 aa7.02□□□□□ -1.29
CTNNA1-222ENST00000520400 OGFOD3Q6PK18 319 aa7.02□□□□□ -1.29
CTNNA1-222ENST00000520400 VHLLQ6RSH7 139 aa7.02□□□□□ -1.29
CTNNA1-222ENST00000520400 ZNF513Q8N8E2 541 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-222ENST00000520400 SIRPGQ9P1W8 387 aa7.02□□□□□ -1.29
CTNNA1-222ENST00000520400 CLEC3AO75596 197 aa7.01□□□□□ -1.29
CTNNA1-222ENST00000520400 DDAH1O94760 285 aa7.01□□□□□ -1.29
CTNNA1-222ENST00000520400 CCNFP41002 786 aa7.01□□□□□ -1.29
CTNNA1-222ENST00000520400 NFIAQ12857 509 aa7.01□□□□□ -1.29
CTNNA1-222ENST00000520400 FXNQ16595 210 aa7.01□□□□□ -1.29
CTNNA1-222ENST00000520400 GNPTABQ3T906 1256 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms