RNA–Protein interactions for RNA: ENST00000520109.1

TNFRSF10B-206, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 2

Gene TNFRSF10B, Length 674 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-206ENST00000520109 ERVK-9P63128 1117 aa23.09■■□□□ 1.29
TNFRSF10B-206ENST00000520109 ERVK-24P63145 666 aa23.09■■□□□ 1.29
TNFRSF10B-206ENST00000520109 TMEM179Q6ZVK1 233 aa23.09■■□□□ 1.29
TNFRSF10B-206ENST00000520109 DPF3Q92784 378 aa23.09■■□□□ 1.29
TNFRSF10B-206ENST00000520109 UNC93B1Q9H1C4 597 aa23.09■■□□□ 1.29
TNFRSF10B-206ENST00000520109 EMILIN3Q9NT22 766 aa23.09■■□□□ 1.29
TNFRSF10B-206ENST00000520109 RABGAP1Q9Y3P9 1069 aa23.09■■□□□ 1.29
TNFRSF10B-206ENST00000520109 FARP2O94887 1054 aaPredicted RBP23.08■■□□□ 1.29
TNFRSF10B-206ENST00000520109 XRCC5P13010 732 aaKnown RBP23.08■■□□□ 1.29
TNFRSF10B-206ENST00000520109 SHMT1P34896 483 aa23.08■■□□□ 1.29
TNFRSF10B-206ENST00000520109 JAG1P78504 1218 aa23.08■■□□□ 1.29
TNFRSF10B-206ENST00000520109 GABPAQ06546 454 aa23.08■■□□□ 1.29
TNFRSF10B-206ENST00000520109 ZYXQ15942 572 aaKnown RBP23.08■■□□□ 1.29
TNFRSF10B-206ENST00000520109 LCORLQ8N3X6 602 aa23.08■■□□□ 1.29
TNFRSF10B-206ENST00000520109 CCDC17Q96LX7 622 aa23.08■■□□□ 1.29
TNFRSF10B-206ENST00000520109 ARHGEF10LQ9HCE6 1279 aa23.08■■□□□ 1.29
TNFRSF10B-206ENST00000520109 HMX1Q9NP08 348 aaPredicted RBP23.08■■□□□ 1.29
TNFRSF10B-206ENST00000520109 ZBTB47Q9UFB7 747 aaPredicted RBP23.08■■□□□ 1.29
TNFRSF10B-206ENST00000520109 NR2E3Q9Y5X4 410 aa23.08■■□□□ 1.29
TNFRSF10B-206ENST00000520109 MBD4O95243 580 aa23.07■■□□□ 1.28
TNFRSF10B-206ENST00000520109 SDR42E1Q8WUS8 393 aa23.07■■□□□ 1.28
TNFRSF10B-206ENST00000520109 SHISA4Q96DD7 197 aa23.07■■□□□ 1.28
TNFRSF10B-206ENST00000520109 PAGR1Q9BTK6 254 aa23.07■■□□□ 1.28
TNFRSF10B-206ENST00000520109 ARMT1Q9H993 441 aa23.07■■□□□ 1.28
TNFRSF10B-206ENST00000520109 PAK6Q9NQU5 681 aaPredicted RBP23.07■■□□□ 1.28
TNFRSF10B-206ENST00000520109 NAV1Q8NEY1 1877 aa23.07■■□□□ 1.28
TNFRSF10B-206ENST00000520109 RPTORQ8N122 1335 aa23.07■■□□□ 1.28
TNFRSF10B-206ENST00000520109 CENPFP49454 3210 aa23.06■■□□□ 1.28
TNFRSF10B-206ENST00000520109 VCAM1P19320 739 aa23.06■■□□□ 1.28
TNFRSF10B-206ENST00000520109 RGS2P41220 211 aa23.06■■□□□ 1.28
TNFRSF10B-206ENST00000520109 C20orf194Q5TEA3 1177 aa23.06■■□□□ 1.28
TNFRSF10B-206ENST00000520109 CATSPERGQ6ZRH7 1159 aa23.06■■□□□ 1.28
TNFRSF10B-206ENST00000520109 ANKLE1Q8NAG6 615 aa23.06■■□□□ 1.28
TNFRSF10B-206ENST00000520109 DEFB118Q96PH6 123 aa23.06■■□□□ 1.28
TNFRSF10B-206ENST00000520109 DCTPP1Q9H773 170 aa23.06■■□□□ 1.28
TNFRSF10B-206ENST00000520109 IVNS1ABPQ9Y6Y0 642 aa23.06■■□□□ 1.28
TNFRSF10B-206ENST00000520109 ZFYP08048 801 aaPredicted RBP23.05■■□□□ 1.28
TNFRSF10B-206ENST00000520109 LBX2Q6XYB7 198 aa23.05■■□□□ 1.28
TNFRSF10B-206ENST00000520109 PLEKHH3Q7Z736 793 aa23.05■■□□□ 1.28
TNFRSF10B-206ENST00000520109 LPAR1Q92633 364 aa23.05■■□□□ 1.28
TNFRSF10B-206ENST00000520109 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.05■■□□□ 1.282e-14■■■■□ 21.9
TNFRSF10B-206ENST00000520109 HOXC10Q9NYD6 342 aa23.05■■□□□ 1.28
TNFRSF10B-206ENST00000520109 RBPJLQ9UBG7 517 aa23.05■■□□□ 1.28
TNFRSF10B-206ENST00000520109 ARPP21Q9UBL0 812 aaPredicted RBP23.05■■□□□ 1.28
TNFRSF10B-206ENST00000520109 GJD2Q9UKL4 321 aa23.05■■□□□ 1.28
TNFRSF10B-206ENST00000520109 ERC2O15083 957 aa23.04■■□□□ 1.28
TNFRSF10B-206ENST00000520109 ZKSCAN1P17029 563 aaPredicted RBP23.04■■□□□ 1.28
TNFRSF10B-206ENST00000520109 PCDH10Q9P2E7 1040 aa23.04■■□□□ 1.28
TNFRSF10B-206ENST00000520109 SLC4A4Q9Y6R1 1079 aa23.04■■□□□ 1.28
TNFRSF10B-206ENST00000520109 DDX60LQ5H9U9 1706 aaKnown RBP23.04■■□□□ 1.28
TNFRSF10B-206ENST00000520109 SEPT2Q15019 361 aa23.03■■□□□ 1.28
TNFRSF10B-206ENST00000520109 SHROOM1Q2M3G4 852 aaPredicted RBP23.03■■□□□ 1.28
TNFRSF10B-206ENST00000520109 GPR142Q7Z601 462 aa23.03■■□□□ 1.28
TNFRSF10B-206ENST00000520109 EDC3Q96F86 508 aaKnown RBP23.03■■□□□ 1.28
TNFRSF10B-206ENST00000520109 ZNF287Q9HBT7 754 aa23.03■■□□□ 1.28
TNFRSF10B-206ENST00000520109 TXNRD2Q9NNW7 524 aa23.03■■□□□ 1.28
TNFRSF10B-206ENST00000520109 CYP2B6P20813 491 aa23.02■■□□□ 1.28
TNFRSF10B-206ENST00000520109 MB21D1Q8N884 522 aa23.02■■□□□ 1.28
TNFRSF10B-206ENST00000520109 APBA2Q99767 749 aa23.02■■□□□ 1.28
TNFRSF10B-206ENST00000520109 RPAP3Q9H6T3 665 aaPredicted RBP23.02■■□□□ 1.28
TNFRSF10B-206ENST00000520109 GNAT2P19087 354 aa23.01■■□□□ 1.27
TNFRSF10B-206ENST00000520109 ICA1Q05084 483 aa23.01■■□□□ 1.27
TNFRSF10B-206ENST00000520109 COG2Q14746 738 aa23.01■■□□□ 1.27
TNFRSF10B-206ENST00000520109 HABP4Q5JVS0 413 aaKnown RBP23.01■■□□□ 1.27
TNFRSF10B-206ENST00000520109 C12orf60Q5U649 245 aa23.01■■□□□ 1.27
TNFRSF10B-206ENST00000520109 GIMAP6Q6P9H5 292 aa23.01■■□□□ 1.27
TNFRSF10B-206ENST00000520109 NECAB2Q7Z6G3 386 aa23.01■■□□□ 1.27
TNFRSF10B-206ENST00000520109 KBTBD3Q8NAB2 608 aa23.01■■□□□ 1.27
TNFRSF10B-206ENST00000520109 TANGO6Q9C0B7 1094 aa23.01■■□□□ 1.27
TNFRSF10B-206ENST00000520109 CRISPLD2Q9H0B8 497 aa23.01■■□□□ 1.27
TNFRSF10B-206ENST00000520109 TTC41PQ6P2S7 1318 aa23.01■■□□□ 1.27
TNFRSF10B-206ENST00000520109 WDR78Q5VTH9 848 aa23■■□□□ 1.27
TNFRSF10B-206ENST00000520109 UBE2Q1Q7Z7E8 422 aa23■■□□□ 1.27
TNFRSF10B-206ENST00000520109 ACER1Q8TDN7 264 aa23■■□□□ 1.27
TNFRSF10B-206ENST00000520109 SLC5A4Q9NY91 659 aa23■■□□□ 1.27
TNFRSF10B-206ENST00000520109 SLC15A5A6NIM6 579 aa22.99■■□□□ 1.27
TNFRSF10B-206ENST00000520109 USP17L12C9JPN9 530 aa22.99■■□□□ 1.27
TNFRSF10B-206ENST00000520109 USP17L21D6R901 530 aa22.99■■□□□ 1.27
TNFRSF10B-206ENST00000520109 SMARCA5O60264 1052 aaPredicted RBP22.99■■□□□ 1.27
TNFRSF10B-206ENST00000520109 C16orf86Q6ZW13 317 aa22.99■■□□□ 1.27
TNFRSF10B-206ENST00000520109 KANSL2Q9H9L4 492 aa22.99■■□□□ 1.27
TNFRSF10B-206ENST00000520109 STRNO43815 780 aa22.98■■□□□ 1.27
TNFRSF10B-206ENST00000520109 EVI5O60447 810 aa22.98■■□□□ 1.27
TNFRSF10B-206ENST00000520109 PRKAR2AP13861 404 aaKnown RBP22.98■■□□□ 1.27
TNFRSF10B-206ENST00000520109 GUCY1A2P33402 732 aa22.98■■□□□ 1.27
TNFRSF10B-206ENST00000520109 CDK8P49336 464 aa22.98■■□□□ 1.27
TNFRSF10B-206ENST00000520109 MAP2K5Q13163 448 aa22.98■■□□□ 1.27
TNFRSF10B-206ENST00000520109 Q3C1V9 767 aa22.98■■□□□ 1.27
TNFRSF10B-206ENST00000520109 MFSD14CQ5VZR4 134 aa22.98■■□□□ 1.27
TNFRSF10B-206ENST00000520109 TRIB2Q92519 343 aa22.98■■□□□ 1.27
TNFRSF10B-206ENST00000520109 APPBP2Q92624 585 aa22.98■■□□□ 1.27
TNFRSF10B-206ENST00000520109 PORCNQ9H237 461 aa22.98■■□□□ 1.27
TNFRSF10B-206ENST00000520109 GOPCQ9HD26 462 aa22.98■■□□□ 1.27
TNFRSF10B-206ENST00000520109 SPDYE16A6NNV3 312 aaPredicted RBP22.97■■□□□ 1.27
TNFRSF10B-206ENST00000520109 H0YGN5 161 aa22.97■■□□□ 1.27
TNFRSF10B-206ENST00000520109 PRKAB2O43741 272 aa22.97■■□□□ 1.27
TNFRSF10B-206ENST00000520109 MORN1Q5T089 497 aa22.97■■□□□ 1.27
TNFRSF10B-206ENST00000520109 TMX2Q9Y320 296 aa22.97■■□□□ 1.27
TNFRSF10B-206ENST00000520109 BRCA2P51587 3418 aa22.97■■□□□ 1.27
TNFRSF10B-206ENST00000520109 WDR46O15213 610 aaKnown RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms