RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 ZSCAN10Q96SZ4 725 aaPredicted RBP16.63■□□□□ 0.25
SDC2-203ENST00000519587 TBC1D2Q9BYX2 928 aa16.63■□□□□ 0.25
SDC2-203ENST00000519587 UPF3BQ9BZI7 483 aaKnown RBP16.63■□□□□ 0.25
SDC2-203ENST00000519587 TCP11L1Q9NUJ3 509 aa16.63■□□□□ 0.25
SDC2-203ENST00000519587 ZSWIM5Q9P217 1185 aa16.63■□□□□ 0.25
SDC2-203ENST00000519587 TMEM88BA6NKF7 163 aa16.62■□□□□ 0.25
SDC2-203ENST00000519587 IFIT3O14879 490 aaKnown RBP16.62■□□□□ 0.25
SDC2-203ENST00000519587 FMR1Q06787 632 aaKnown RBP eCLIP16.62■□□□□ 0.25
SDC2-203ENST00000519587 RAB3GAP1Q15042 981 aa16.62■□□□□ 0.25
SDC2-203ENST00000519587 TMEM67Q5HYA8 995 aa16.62■□□□□ 0.25
SDC2-203ENST00000519587 CYB5R4Q7L1T6 521 aa16.62■□□□□ 0.25
SDC2-203ENST00000519587 SH2D4AQ9H788 454 aa16.62■□□□□ 0.25
SDC2-203ENST00000519587 AS3MTQ9HBK9 375 aa16.62■□□□□ 0.25
SDC2-203ENST00000519587 ARHGEF10LQ9HCE6 1279 aa16.62■□□□□ 0.25
SDC2-203ENST00000519587 TNKSO95271 1327 aa16.62■□□□□ 0.25
SDC2-203ENST00000519587 CCDC85CA6NKD9 419 aa16.61■□□□□ 0.25
SDC2-203ENST00000519587 USP17L5A8MUK1 530 aa16.61■□□□□ 0.25
SDC2-203ENST00000519587 ST18O60284 1047 aa16.61■□□□□ 0.25
SDC2-203ENST00000519587 TTLL1O95922 423 aa16.61■□□□□ 0.25
SDC2-203ENST00000519587 SEPT2Q15019 361 aa16.61■□□□□ 0.25
SDC2-203ENST00000519587 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.61■□□□□ 0.25
SDC2-203ENST00000519587 ZKSCAN4Q969J2 545 aaPredicted RBP16.61■□□□□ 0.25
SDC2-203ENST00000519587 CEP95Q96GE4 821 aa16.61■□□□□ 0.25
SDC2-203ENST00000519587 FZD1Q9UP38 647 aa16.61■□□□□ 0.25
SDC2-203ENST00000519587 PHIPQ8WWQ0 1821 aa16.61■□□□□ 0.25
SDC2-203ENST00000519587 IGKV6D-41A0A0C4DH26 115 aa16.6■□□□□ 0.25
SDC2-203ENST00000519587 NEK4P51957 841 aa16.6■□□□□ 0.25
SDC2-203ENST00000519587 ANTXR2P58335 489 aa16.6■□□□□ 0.25
SDC2-203ENST00000519587 RRP1BQ14684 758 aaKnown RBP16.6■□□□□ 0.25
SDC2-203ENST00000519587 WTAPQ15007 396 aa16.6■□□□□ 0.25
SDC2-203ENST00000519587 ANKRD1Q15327 319 aa16.6■□□□□ 0.25
SDC2-203ENST00000519587 LDLRAD1Q5T700 205 aa16.6■□□□□ 0.25
SDC2-203ENST00000519587 IFIT1BQ5T764 474 aaKnown RBP16.6■□□□□ 0.25
SDC2-203ENST00000519587 CST9Q5W186 159 aa16.6■□□□□ 0.25
SDC2-203ENST00000519587 DGKHQ86XP1 1220 aa16.6■□□□□ 0.25
SDC2-203ENST00000519587 TMTC2Q8N394 836 aa16.6■□□□□ 0.25
SDC2-203ENST00000519587 TTC14Q96N46 770 aa16.6■□□□□ 0.25
SDC2-203ENST00000519587 FEZ1Q99689 392 aa16.6■□□□□ 0.25
SDC2-203ENST00000519587 PDRG1Q9NUG6 133 aa16.6■□□□□ 0.25
SDC2-203ENST00000519587 MTMR4Q9NYA4 1195 aa16.6■□□□□ 0.25
SDC2-203ENST00000519587 SYNPO2Q9UMS6 1093 aa16.6■□□□□ 0.25
SDC2-203ENST00000519587 STX8Q9UNK0 236 aa16.6■□□□□ 0.25
SDC2-203ENST00000519587 SNCAIPQ9Y6H5 919 aa16.6■□□□□ 0.25
SDC2-203ENST00000519587 UBE2Q2LH0YL09 131 aa16.59■□□□□ 0.25
SDC2-203ENST00000519587 PTPRAP18433 802 aa16.59■□□□□ 0.25
SDC2-203ENST00000519587 RGS19P49795 217 aa16.59■□□□□ 0.25
SDC2-203ENST00000519587 HUNKP57058 714 aa16.59■□□□□ 0.25
SDC2-203ENST00000519587 EXOSC10Q01780 885 aaKnown RBP16.59■□□□□ 0.25
SDC2-203ENST00000519587 ATP2B2Q01814 1243 aa16.59■□□□□ 0.25
SDC2-203ENST00000519587 NFXL1Q6ZNB6 911 aa16.59■□□□□ 0.25
SDC2-203ENST00000519587 MOB2Q70IA6 237 aa16.59■□□□□ 0.25
SDC2-203ENST00000519587 CHST3Q7LGC8 479 aa16.59■□□□□ 0.25
SDC2-203ENST00000519587 ERO1BQ86YB8 467 aa16.59■□□□□ 0.25
SDC2-203ENST00000519587 ENAHQ8N8S7 591 aaPredicted RBP16.59■□□□□ 0.25
SDC2-203ENST00000519587 SLC10A4Q96EP9 437 aa16.59■□□□□ 0.25
SDC2-203ENST00000519587 KIF2CQ99661 725 aa16.59■□□□□ 0.25
SDC2-203ENST00000519587 ZKSCAN3Q9BRR0 538 aa16.59■□□□□ 0.25
SDC2-203ENST00000519587 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.59■□□□□ 0.25
SDC2-203ENST00000519587 KAT14Q9H8E8 782 aa16.59■□□□□ 0.25
SDC2-203ENST00000519587 NYAP2Q9P242 653 aa16.59■□□□□ 0.25
SDC2-203ENST00000519587 CCDC69A6NI79 296 aa16.58■□□□□ 0.24
SDC2-203ENST00000519587 SH2B2O14492 632 aaPredicted RBP16.58■□□□□ 0.24
SDC2-203ENST00000519587 NMT2O60551 498 aa16.58■□□□□ 0.24
SDC2-203ENST00000519587 TOP1P11387 765 aaKnown RBP16.58■□□□□ 0.24
SDC2-203ENST00000519587 CPA1P15085 419 aa16.58■□□□□ 0.24
SDC2-203ENST00000519587 LIFRP42702 1097 aa16.58■□□□□ 0.24
SDC2-203ENST00000519587 FBXL16Q8N461 479 aa16.58■□□□□ 0.24
SDC2-203ENST00000519587 TCEANC2Q96MN5 208 aa16.58■□□□□ 0.24
SDC2-203ENST00000519587 ELP3Q9H9T3 547 aa16.58■□□□□ 0.24
SDC2-203ENST00000519587 IL17RBQ9NRM6 502 aa16.58■□□□□ 0.24
SDC2-203ENST00000519587 ABT1Q9ULW3 272 aaKnown RBP16.58■□□□□ 0.24
SDC2-203ENST00000519587 PTPRFP10586 1907 aa16.57■□□□□ 0.24
SDC2-203ENST00000519587 SPDYE5A6NIY4 337 aa16.57■□□□□ 0.24
SDC2-203ENST00000519587 EEF2P13639 858 aaKnown RBP16.57■□□□□ 0.24
SDC2-203ENST00000519587 GUCY1A2P33402 732 aa16.57■□□□□ 0.24
SDC2-203ENST00000519587 JAG1P78504 1218 aa16.57■□□□□ 0.24
SDC2-203ENST00000519587 PPATQ06203 517 aa16.57■□□□□ 0.24
SDC2-203ENST00000519587 SHROOM1Q2M3G4 852 aaPredicted RBP16.57■□□□□ 0.24
SDC2-203ENST00000519587 SYNE3Q6ZMZ3 975 aa16.57■□□□□ 0.24
SDC2-203ENST00000519587 Q6ZUG5 572 aa16.57■□□□□ 0.24
SDC2-203ENST00000519587 ZNF280CQ8ND82 737 aa16.57■□□□□ 0.24
SDC2-203ENST00000519587 ANKS1AQ92625 1134 aa16.57■□□□□ 0.24
SDC2-203ENST00000519587 CLMNQ96JQ2 1002 aa16.57■□□□□ 0.24
SDC2-203ENST00000519587 WDR18Q9BV38 432 aa16.57■□□□□ 0.24
SDC2-203ENST00000519587 LRRC2Q9BYS8 371 aa16.57■□□□□ 0.24
SDC2-203ENST00000519587 ALDH8A1Q9H2A2 487 aaPredicted RBP16.57■□□□□ 0.24
SDC2-203ENST00000519587 LY9Q9HBG7 655 aa16.57■□□□□ 0.24
SDC2-203ENST00000519587 GOPCQ9HD26 462 aa16.57■□□□□ 0.24
SDC2-203ENST00000519587 TLL2Q9Y6L7 1015 aa16.57■□□□□ 0.24
SDC2-203ENST00000519587 THSD7BQ9C0I4 1608 aa16.56■□□□□ 0.24
SDC2-203ENST00000519587 RASSF10A6NK89 507 aa16.56■□□□□ 0.24
SDC2-203ENST00000519587 NOVP48745 357 aa16.56■□□□□ 0.24
SDC2-203ENST00000519587 MCM2P49736 904 aa16.56■□□□□ 0.24
SDC2-203ENST00000519587 MAP2K1Q02750 393 aaPredicted RBP16.56■□□□□ 0.24
SDC2-203ENST00000519587 PPIL2Q13356 520 aa16.56■□□□□ 0.24
SDC2-203ENST00000519587 SEC23AQ15436 765 aa16.56■□□□□ 0.24
SDC2-203ENST00000519587 CATIPQ7Z7H3 387 aa16.56■□□□□ 0.24
SDC2-203ENST00000519587 SAPCD2Q86UD0 394 aa16.56■□□□□ 0.24
SDC2-203ENST00000519587 CLEC10AQ8IUN9 316 aa16.56■□□□□ 0.24
SDC2-203ENST00000519587 NKX2-3Q8TAU0 364 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms