RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 MCATQ8IVS2 390 aaKnown RBP6.21□□□□□ -1.42
PABPC1-206ENST00000518293 MRPL41Q8IXM3 137 aaKnown RBP6.21□□□□□ -1.42
PABPC1-206ENST00000518293 TOP6BLQ8N6T0 577 aa6.21□□□□□ -1.42
PABPC1-206ENST00000518293 ACSF2Q96CM8 615 aaPredicted RBP6.21□□□□□ -1.42
PABPC1-206ENST00000518293 NT5C1AQ9BXI3 368 aa6.21□□□□□ -1.42
PABPC1-206ENST00000518293 FOXQ1Q9C009 403 aa6.21□□□□□ -1.42
PABPC1-206ENST00000518293 BRMS1Q9HCU9 246 aa6.21□□□□□ -1.42
PABPC1-206ENST00000518293 PRDM10Q9NQV6 1147 aa6.21□□□□□ -1.42
PABPC1-206ENST00000518293 MBNL3Q9NUK0 354 aaKnown RBP6.21□□□□□ -1.42
PABPC1-206ENST00000518293 ADAM30Q9UKF2 790 aa6.21□□□□□ -1.42
PABPC1-206ENST00000518293 PLCG1P19174 1290 aa6.2□□□□□ -1.42
PABPC1-206ENST00000518293 CD96P40200 585 aa6.2□□□□□ -1.42
PABPC1-206ENST00000518293 OXCT1P55809 520 aa6.2□□□□□ -1.42
PABPC1-206ENST00000518293 PKN1Q16512 942 aa6.2□□□□□ -1.42
PABPC1-206ENST00000518293 CWF19L2Q2TBE0 894 aaKnown RBP6.2□□□□□ -1.42
PABPC1-206ENST00000518293 SEZ6Q53EL9 994 aa6.2□□□□□ -1.42
PABPC1-206ENST00000518293 TMEM201Q5SNT2 666 aa6.2□□□□□ -1.42
PABPC1-206ENST00000518293 PRAMEF13Q5VWM6 474 aa6.2□□□□□ -1.42
PABPC1-206ENST00000518293 RIN3Q8TB24 985 aa6.2□□□□□ -1.42
PABPC1-206ENST00000518293 TMEM87BQ96K49 555 aa6.2□□□□□ -1.42
PABPC1-206ENST00000518293 REV1Q9UBZ9 1251 aa6.2□□□□□ -1.42
PABPC1-206ENST00000518293 ADAMTS6Q9UKP5 1117 aa6.2□□□□□ -1.42
PABPC1-206ENST00000518293 U3KQE9 123 aa6.2□□□□□ -1.42
PABPC1-206ENST00000518293 UPK3BL1B0FP48 263 aa6.19□□□□□ -1.42
PABPC1-206ENST00000518293 UPK3BL2E5RIL1 263 aa6.19□□□□□ -1.42
PABPC1-206ENST00000518293 RBAK-RBAKDNI3L0D1 243 aa6.19□□□□□ -1.42
PABPC1-206ENST00000518293 SLITRK5O94991 958 aa6.19□□□□□ -1.42
PABPC1-206ENST00000518293 HTR3BO95264 441 aa6.19□□□□□ -1.42
PABPC1-206ENST00000518293 EOMESO95936 686 aa6.19□□□□□ -1.42
PABPC1-206ENST00000518293 CST3P01034 146 aaPredicted RBP6.19□□□□□ -1.42
PABPC1-206ENST00000518293 ITIH2P19823 946 aa6.19□□□□□ -1.42
PABPC1-206ENST00000518293 RAD51AP2Q09MP3 1159 aa6.19□□□□□ -1.42
PABPC1-206ENST00000518293 APOBRQ0VD83 1088 aa6.19□□□□□ -1.42
PABPC1-206ENST00000518293 ZNF124Q15973 351 aa6.19□□□□□ -1.42
PABPC1-206ENST00000518293 SLC6A19Q695T7 634 aa6.19□□□□□ -1.42
PABPC1-206ENST00000518293 KSR1Q8IVT5 923 aa6.19□□□□□ -1.42
PABPC1-206ENST00000518293 SLITRK4Q8IW52 837 aa6.19□□□□□ -1.42
PABPC1-206ENST00000518293 ZNF654Q8IZM8 581 aa6.19□□□□□ -1.42
PABPC1-206ENST00000518293 LRRN4CLQ8ND94 238 aa6.19□□□□□ -1.42
PABPC1-206ENST00000518293 TMEM40Q8WWA1 233 aa6.19□□□□□ -1.42
PABPC1-206ENST00000518293 HEXIM2Q96MH2 286 aaKnown RBP6.19□□□□□ -1.42
PABPC1-206ENST00000518293 DPH2Q9BQC3 489 aaPredicted RBP6.19□□□□□ -1.42
PABPC1-206ENST00000518293 CNTNAP4Q9C0A0 1308 aa6.19□□□□□ -1.42
PABPC1-206ENST00000518293 MYO15BQ96JP2 1530 aa6.19□□□□□ -1.42
PABPC1-206ENST00000518293 SHROOM4Q9ULL8 1493 aa6.18□□□□□ -1.42
PABPC1-206ENST00000518293 DBX1A6NMT0 343 aa6.18□□□□□ -1.42
PABPC1-206ENST00000518293 DNAJA2O60884 412 aa6.18□□□□□ -1.42
PABPC1-206ENST00000518293 CLCQ05315 142 aa6.18□□□□□ -1.42
PABPC1-206ENST00000518293 MFSD2AQ8NA29 543 aa6.18□□□□□ -1.42
PABPC1-206ENST00000518293 XAGE3Q8WTP9 111 aa6.18□□□□□ -1.42
PABPC1-206ENST00000518293 NKD1Q969G9 470 aa6.18□□□□□ -1.42
PABPC1-206ENST00000518293 SLC38A3Q99624 504 aa6.18□□□□□ -1.42
PABPC1-206ENST00000518293 PLAGL2Q9UPG8 496 aa6.18□□□□□ -1.42
PABPC1-206ENST00000518293 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.18□□□□□ -1.42
PABPC1-206ENST00000518293 PCDHB14Q9Y5E9 798 aa6.18□□□□□ -1.42
PABPC1-206ENST00000518293 CHURC1-FNTBB4DL54 471 aa6.17□□□□□ -1.42
PABPC1-206ENST00000518293 ATE1O95260 518 aa6.17□□□□□ -1.42
PABPC1-206ENST00000518293 TCF3P15923 654 aa6.17□□□□□ -1.42
PABPC1-206ENST00000518293 PAK2Q13177 524 aa6.17□□□□□ -1.42
PABPC1-206ENST00000518293 SLC23A3Q6PIS1 610 aa6.17□□□□□ -1.42
PABPC1-206ENST00000518293 MIPEPQ99797 713 aa6.17□□□□□ -1.42
PABPC1-206ENST00000518293 EHMT1Q9H9B1 1298 aa6.17□□□□□ -1.42
PABPC1-206ENST00000518293 GTF2IRD1Q9UHL9 959 aa6.17□□□□□ -1.42
PABPC1-206ENST00000518293 SNX11Q9Y5W9 270 aa6.17□□□□□ -1.42
PABPC1-206ENST00000518293 BICRAQ9NZM4 1560 aa6.16□□□□□ -1.42
PABPC1-206ENST00000518293 E9PSI1 815 aa6.16□□□□□ -1.42
PABPC1-206ENST00000518293 MCM4P33991 863 aa6.16□□□□□ -1.42
PABPC1-206ENST00000518293 LETMD1Q6P1Q0 360 aa6.16□□□□□ -1.42
PABPC1-206ENST00000518293 GK5Q6ZS86 529 aa6.16□□□□□ -1.42
PABPC1-206ENST00000518293 SLFN12Q8IYM2 578 aa6.16□□□□□ -1.42
PABPC1-206ENST00000518293 REXO1Q8N1G1 1221 aaKnown RBP6.16□□□□□ -1.42
PABPC1-206ENST00000518293 FAM13CQ8NE31 585 aa6.16□□□□□ -1.42
PABPC1-206ENST00000518293 ASB11Q8WXH4 323 aa6.16□□□□□ -1.42
PABPC1-206ENST00000518293 TNKS2Q9H2K2 1166 aa6.16□□□□□ -1.42
PABPC1-206ENST00000518293 IGSF5Q9NSI5 407 aa6.16□□□□□ -1.42
PABPC1-206ENST00000518293 CECR2Q9BXF3 1484 aa6.15□□□□□ -1.42
PABPC1-206ENST00000518293 SLC22A31A6NKX4 558 aa6.15□□□□□ -1.42
PABPC1-206ENST00000518293 IGF2BP3O00425 579 aaKnown RBP eCLIP6.15□□□□□ -1.424e-9■■■□□ 14.8
PABPC1-206ENST00000518293 IKZF1Q13422 519 aa6.15□□□□□ -1.42
PABPC1-206ENST00000518293 CDH24Q86UP0 819 aa6.15□□□□□ -1.42
PABPC1-206ENST00000518293 FLAD1Q8NFF5 587 aa6.15□□□□□ -1.42
PABPC1-206ENST00000518293 PPP1R13LQ8WUF5 828 aa6.15□□□□□ -1.42
PABPC1-206ENST00000518293 TGIF2Q9GZN2 237 aa6.15□□□□□ -1.42
PABPC1-206ENST00000518293 ACBD3Q9H3P7 528 aa6.15□□□□□ -1.42
PABPC1-206ENST00000518293 KLHL3Q9UH77 587 aa6.15□□□□□ -1.42
PABPC1-206ENST00000518293 LRRC10BA6NIK2 292 aa6.14□□□□□ -1.43
PABPC1-206ENST00000518293 ZNF165P49910 485 aa6.14□□□□□ -1.43
PABPC1-206ENST00000518293 YARSP54577 528 aaKnown RBP6.14□□□□□ -1.43
PABPC1-206ENST00000518293 ZSWIM9Q86XI8 627 aa6.14□□□□□ -1.43
PABPC1-206ENST00000518293 DNAJB8Q8NHS0 232 aa6.14□□□□□ -1.43
PABPC1-206ENST00000518293 ANTXR1Q9H6X2 564 aa6.14□□□□□ -1.43
PABPC1-206ENST00000518293 PRDM7Q9NQW5 492 aa6.14□□□□□ -1.43
PABPC1-206ENST00000518293 CEP131Q9UPN4 1083 aa6.14□□□□□ -1.43
PABPC1-206ENST00000518293 GNAT3A8MTJ3 354 aa6.13□□□□□ -1.43
PABPC1-206ENST00000518293 PRR33A8MZF0 331 aa6.13□□□□□ -1.43
PABPC1-206ENST00000518293 ERCC5P28715 1186 aaPredicted RBP6.13□□□□□ -1.43
PABPC1-206ENST00000518293 GJA8P48165 433 aa6.13□□□□□ -1.43
PABPC1-206ENST00000518293 TNNI2P48788 182 aa6.13□□□□□ -1.43
PABPC1-206ENST00000518293 ZP2Q05996 745 aa6.13□□□□□ -1.43
PABPC1-206ENST00000518293 KCNMB1Q16558 191 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 230 ms