RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 CASP8AP2Q9UKL3 1982 aa13.34□□□□□ -0.27
UBE2D3-232ENST00000514755 MYH7P12883 1935 aa13.33□□□□□ -0.28
UBE2D3-232ENST00000514755 MAGEB6P1A0A0J9YX57 407 aa13.33□□□□□ -0.28
UBE2D3-232ENST00000514755 CA12O43570 354 aa13.33□□□□□ -0.28
UBE2D3-232ENST00000514755 MX1P20591 662 aa13.33□□□□□ -0.28
UBE2D3-232ENST00000514755 SREBF2Q12772 1141 aa13.33□□□□□ -0.28
UBE2D3-232ENST00000514755 NOL9Q5SY16 702 aaKnown RBP13.33□□□□□ -0.28
UBE2D3-232ENST00000514755 METTL3Q86U44 580 aaKnown RBP13.33□□□□□ -0.28
UBE2D3-232ENST00000514755 ERO1BQ86YB8 467 aa13.33□□□□□ -0.28
UBE2D3-232ENST00000514755 PXYLP1Q8TE99 480 aa13.33□□□□□ -0.28
UBE2D3-232ENST00000514755 BRI3BPQ8WY22 251 aa13.33□□□□□ -0.28
UBE2D3-232ENST00000514755 ARMT1Q9H993 441 aa13.33□□□□□ -0.28
UBE2D3-232ENST00000514755 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.33□□□□□ -0.28
UBE2D3-232ENST00000514755 TTC41PQ6P2S7 1318 aa13.33□□□□□ -0.28
UBE2D3-232ENST00000514755 C3orf80F5H4A9 247 aa13.32□□□□□ -0.28
UBE2D3-232ENST00000514755 PRKAB2O43741 272 aa13.32□□□□□ -0.28
UBE2D3-232ENST00000514755 USP5P45974 858 aa13.32□□□□□ -0.28
UBE2D3-232ENST00000514755 AMHR2Q16671 573 aa13.32□□□□□ -0.28
UBE2D3-232ENST00000514755 SHROOM1Q2M3G4 852 aaPredicted RBP13.32□□□□□ -0.28
UBE2D3-232ENST00000514755 SCYL3Q8IZE3 742 aa13.32□□□□□ -0.28
UBE2D3-232ENST00000514755 SDR42E1Q8WUS8 393 aa13.32□□□□□ -0.28
UBE2D3-232ENST00000514755 GPATCH3Q96I76 525 aa13.32□□□□□ -0.28
UBE2D3-232ENST00000514755 LNPKQ9C0E8 428 aa13.32□□□□□ -0.28
UBE2D3-232ENST00000514755 PUS7LQ9H0K6 701 aaKnown RBP13.32□□□□□ -0.28
UBE2D3-232ENST00000514755 RWDD1Q9H446 243 aaPredicted RBP13.32□□□□□ -0.28
UBE2D3-232ENST00000514755 MYH1P12882 1939 aa13.32□□□□□ -0.28
UBE2D3-232ENST00000514755 DDX60LQ5H9U9 1706 aaKnown RBP13.32□□□□□ -0.28
UBE2D3-232ENST00000514755 DOCK1Q14185 1865 aa13.31□□□□□ -0.28
UBE2D3-232ENST00000514755 CCL15-CCL14A0A0B4J2E2 113 aa13.31□□□□□ -0.28
UBE2D3-232ENST00000514755 MBD4O95243 580 aa13.31□□□□□ -0.28
UBE2D3-232ENST00000514755 JAG1P78504 1218 aa13.31□□□□□ -0.28
UBE2D3-232ENST00000514755 PPATQ06203 517 aa13.31□□□□□ -0.28
UBE2D3-232ENST00000514755 PPIL2Q13356 520 aa13.31□□□□□ -0.28
UBE2D3-232ENST00000514755 UBE3CQ15386 1083 aa13.31□□□□□ -0.28
UBE2D3-232ENST00000514755 CCL15Q16663 113 aa13.31□□□□□ -0.28
UBE2D3-232ENST00000514755 TMED8Q6PL24 325 aaPredicted RBP13.31□□□□□ -0.28
UBE2D3-232ENST00000514755 FAM43AQ8N2R8 423 aa13.31□□□□□ -0.28
UBE2D3-232ENST00000514755 KBTBD3Q8NAB2 608 aa13.31□□□□□ -0.28
UBE2D3-232ENST00000514755 KRTAP3-3Q9BYR6 98 aa13.31□□□□□ -0.28
UBE2D3-232ENST00000514755 KRTAP3-2Q9BYR7 98 aa13.31□□□□□ -0.28
UBE2D3-232ENST00000514755 DHX36Q9H2U1 1008 aaKnown RBP13.31□□□□□ -0.28
UBE2D3-232ENST00000514755 KIAA1468Q9P260 1216 aa13.31□□□□□ -0.28
UBE2D3-232ENST00000514755 PI4KBQ9UBF8 816 aa13.31□□□□□ -0.28
UBE2D3-232ENST00000514755 PHIPQ8WWQ0 1821 aa13.3□□□□□ -0.28
UBE2D3-232ENST00000514755 NAV1Q8NEY1 1877 aa13.3□□□□□ -0.28
UBE2D3-232ENST00000514755 SMIM22K7EJ46 135 aa13.3□□□□□ -0.28
UBE2D3-232ENST00000514755 PTPRAP18433 802 aa13.3□□□□□ -0.28
UBE2D3-232ENST00000514755 PLCD1P51178 756 aa13.3□□□□□ -0.28
UBE2D3-232ENST00000514755 GTF2A2P52657 109 aa13.3□□□□□ -0.28
UBE2D3-232ENST00000514755 PDE1AP54750 535 aa13.3□□□□□ -0.28
UBE2D3-232ENST00000514755 INHBEP58166 350 aa13.3□□□□□ -0.28
UBE2D3-232ENST00000514755 TATDN2Q93075 761 aa13.3□□□□□ -0.28
UBE2D3-232ENST00000514755 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.3□□□□□ -0.289e-7■■□□□ 13.5
UBE2D3-232ENST00000514755 ATAD5Q96QE3 1844 aa13.29□□□□□ -0.28
UBE2D3-232ENST00000514755 ERC2O15083 957 aa13.29□□□□□ -0.28
UBE2D3-232ENST00000514755 CTNND1O60716 968 aaKnown RBP13.29□□□□□ -0.28
UBE2D3-232ENST00000514755 GLRX3O76003 335 aaKnown RBP13.29□□□□□ -0.28
UBE2D3-232ENST00000514755 CAP2P40123 477 aa13.29□□□□□ -0.28
UBE2D3-232ENST00000514755 MOGSQ13724 837 aa13.29□□□□□ -0.28
UBE2D3-232ENST00000514755 ADGRD1Q6QNK2 874 aa13.29□□□□□ -0.28
UBE2D3-232ENST00000514755 NUDT18Q6ZVK8 323 aa13.29□□□□□ -0.28
UBE2D3-232ENST00000514755 METTL16Q86W50 562 aaKnown RBP13.29□□□□□ -0.28
UBE2D3-232ENST00000514755 CERS3Q8IU89 383 aa13.29□□□□□ -0.28
UBE2D3-232ENST00000514755 OSBP2Q969R2 916 aa13.29□□□□□ -0.28
UBE2D3-232ENST00000514755 PHOX2BQ99453 314 aa13.29□□□□□ -0.28
UBE2D3-232ENST00000514755 DCP1AQ9NPI6 582 aaPredicted RBP13.29□□□□□ -0.28
UBE2D3-232ENST00000514755 STAP2Q9UGK3 403 aa13.29□□□□□ -0.28
UBE2D3-232ENST00000514755 HERC5Q9UII4 1024 aaKnown RBP13.29□□□□□ -0.28
UBE2D3-232ENST00000514755 KCNH4Q9UQ05 1017 aa13.29□□□□□ -0.28
UBE2D3-232ENST00000514755 ZHX2Q9Y6X8 837 aa13.29□□□□□ -0.28
UBE2D3-232ENST00000514755 BTBD19C9JJ37 291 aa13.28□□□□□ -0.28
UBE2D3-232ENST00000514755 GDF11O95390 407 aa13.28□□□□□ -0.28
UBE2D3-232ENST00000514755 CYP2D6P10635 497 aa13.28□□□□□ -0.28
UBE2D3-232ENST00000514755 NUCB1Q02818 461 aa13.28□□□□□ -0.28
UBE2D3-232ENST00000514755 PDE4DQ08499 809 aa13.28□□□□□ -0.28
UBE2D3-232ENST00000514755 CRHR2Q13324 411 aa13.28□□□□□ -0.28
UBE2D3-232ENST00000514755 SNAPC2Q13487 334 aa13.28□□□□□ -0.28
UBE2D3-232ENST00000514755 ZSCAN25Q6NSZ9 544 aa13.28□□□□□ -0.28
UBE2D3-232ENST00000514755 CHD1LQ86WJ1 897 aa13.28□□□□□ -0.28
UBE2D3-232ENST00000514755 FOXP4Q8IVH2 680 aaPredicted RBP13.28□□□□□ -0.28
UBE2D3-232ENST00000514755 TNS4Q8IZW8 715 aa13.28□□□□□ -0.28
UBE2D3-232ENST00000514755 ZNF296Q8WUU4 475 aaPredicted RBP13.28□□□□□ -0.28
UBE2D3-232ENST00000514755 SEC62Q99442 399 aaKnown RBP13.28□□□□□ -0.28
UBE2D3-232ENST00000514755 CFHR5Q9BXR6 569 aa13.28□□□□□ -0.28
UBE2D3-232ENST00000514755 CRNKL1Q9BZJ0 848 aaKnown RBP13.28□□□□□ -0.28
UBE2D3-232ENST00000514755 PICK1Q9NRD5 415 aa13.28□□□□□ -0.28
UBE2D3-232ENST00000514755 MCM9Q9NXL9 1143 aa13.28□□□□□ -0.28
UBE2D3-232ENST00000514755 PNMA3Q9UL41 463 aa13.28□□□□□ -0.28
UBE2D3-232ENST00000514755 AFG3L2Q9Y4W6 797 aa13.28□□□□□ -0.28
UBE2D3-232ENST00000514755 BAZ2AQ9UIF9 1905 aaKnown RBP13.27□□□□□ -0.28
UBE2D3-232ENST00000514755 BHMG1C9JSJ3 638 aaPredicted RBP13.27□□□□□ -0.29
UBE2D3-232ENST00000514755 M0R2C6 588 aa13.27□□□□□ -0.29
UBE2D3-232ENST00000514755 GPR25O00155 361 aa13.27□□□□□ -0.29
UBE2D3-232ENST00000514755 RNF113AO15541 343 aaKnown RBP13.27□□□□□ -0.29
UBE2D3-232ENST00000514755 HLA-DOAP06340 250 aa13.27□□□□□ -0.29
UBE2D3-232ENST00000514755 CETPP11597 493 aa13.27□□□□□ -0.29
UBE2D3-232ENST00000514755 DGKZQ13574 1117 aa13.27□□□□□ -0.29
UBE2D3-232ENST00000514755 CRACR2BQ8N4Y2 399 aaPredicted RBP13.27□□□□□ -0.29
UBE2D3-232ENST00000514755 APPBP2Q92624 585 aa13.27□□□□□ -0.29
UBE2D3-232ENST00000514755 PTPRFP10586 1907 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms