RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 CNMDO75829 334 aa14.81□□□□□ -0.04
SNHG4-208ENST00000514110 POLR3DP05423 398 aaPredicted RBP14.81□□□□□ -0.04
SNHG4-208ENST00000514110 MAPK4P31152 587 aa14.81□□□□□ -0.04
SNHG4-208ENST00000514110 GUCY1A2P33402 732 aa14.81□□□□□ -0.04
SNHG4-208ENST00000514110 GABPAQ06546 454 aa14.81□□□□□ -0.04
SNHG4-208ENST00000514110 GPR142Q7Z601 462 aa14.81□□□□□ -0.04
SNHG4-208ENST00000514110 USP6NLQ92738 828 aa14.81□□□□□ -0.04
SNHG4-208ENST00000514110 FEZ1Q99689 392 aa14.81□□□□□ -0.04
SNHG4-208ENST00000514110 NUDT12Q9BQG2 462 aa14.81□□□□□ -0.04
SNHG4-208ENST00000514110 CRNKL1Q9BZJ0 848 aaKnown RBP14.81□□□□□ -0.04
SNHG4-208ENST00000514110 KIAA1683Q9H0B3 1180 aa14.81□□□□□ -0.04
SNHG4-208ENST00000514110 HMX1Q9NP08 348 aaPredicted RBP14.81□□□□□ -0.04
SNHG4-208ENST00000514110 NR2E3Q9Y5X4 410 aa14.81□□□□□ -0.04
SNHG4-208ENST00000514110 RANBP2P49792 3224 aaKnown RBP14.8□□□□□ -0.04
SNHG4-208ENST00000514110 USP17L15C9J2P7 530 aa14.8□□□□□ -0.04
SNHG4-208ENST00000514110 USP17L13C9JLJ4 530 aa14.8□□□□□ -0.04
SNHG4-208ENST00000514110 USP17L11C9JVI0 530 aa14.8□□□□□ -0.04
SNHG4-208ENST00000514110 USP17L18D6R9N7 530 aa14.8□□□□□ -0.04
SNHG4-208ENST00000514110 USP17L22D6RA61 530 aa14.8□□□□□ -0.04
SNHG4-208ENST00000514110 USP17L17D6RBQ6 530 aa14.8□□□□□ -0.04
SNHG4-208ENST00000514110 USP17L19D6RCP7 530 aa14.8□□□□□ -0.04
SNHG4-208ENST00000514110 USP17L20D6RJB6 530 aa14.8□□□□□ -0.04
SNHG4-208ENST00000514110 XRCC5P13010 732 aaKnown RBP14.8□□□□□ -0.04
SNHG4-208ENST00000514110 VCAM1P19320 739 aa14.8□□□□□ -0.04
SNHG4-208ENST00000514110 MNX1P50219 401 aaPredicted RBP14.8□□□□□ -0.04
SNHG4-208ENST00000514110 USP14P54578 494 aa14.8□□□□□ -0.04
SNHG4-208ENST00000514110 USP17L24Q0WX57 530 aa14.8□□□□□ -0.04
SNHG4-208ENST00000514110 SLFNL1Q499Z3 407 aa14.8□□□□□ -0.04
SNHG4-208ENST00000514110 MORN1Q5T089 497 aa14.8□□□□□ -0.04
SNHG4-208ENST00000514110 MAP3K21Q5TCX8 1036 aa14.8□□□□□ -0.04
SNHG4-208ENST00000514110 CATSPERGQ6ZRH7 1159 aa14.8□□□□□ -0.04
SNHG4-208ENST00000514110 LCORLQ8N3X6 602 aa14.8□□□□□ -0.04
SNHG4-208ENST00000514110 GTF3C2Q8WUA4 911 aaPredicted RBP14.8□□□□□ -0.04
SNHG4-208ENST00000514110 SDR42E1Q8WUS8 393 aa14.8□□□□□ -0.04
SNHG4-208ENST00000514110 SOCS4Q8WXH5 440 aa14.8□□□□□ -0.04
SNHG4-208ENST00000514110 PRO3102Q9H379 93 aa14.8□□□□□ -0.04
SNHG4-208ENST00000514110 CABP5Q9NP86 173 aa14.8□□□□□ -0.04
SNHG4-208ENST00000514110 MCM9Q9NXL9 1143 aa14.8□□□□□ -0.04
SNHG4-208ENST00000514110 RABGAP1Q9Y3P9 1069 aa14.8□□□□□ -0.04
SNHG4-208ENST00000514110 ALPK3Q96L96 1907 aa14.8□□□□□ -0.04
SNHG4-208ENST00000514110 EVI5O60447 810 aa14.79□□□□□ -0.04
SNHG4-208ENST00000514110 RAB11FIP3O75154 756 aa14.79□□□□□ -0.04
SNHG4-208ENST00000514110 CYP2D6P10635 497 aa14.79□□□□□ -0.04
SNHG4-208ENST00000514110 PRKAR2AP13861 404 aaKnown RBP14.79□□□□□ -0.04
SNHG4-208ENST00000514110 PDE3AQ14432 1141 aa14.79□□□□□ -0.04
SNHG4-208ENST00000514110 SEPT2Q15019 361 aa14.79□□□□□ -0.04
SNHG4-208ENST00000514110 CCL14Q16627 93 aa14.79□□□□□ -0.04
SNHG4-208ENST00000514110 NECAB2Q7Z6G3 386 aa14.79□□□□□ -0.04
SNHG4-208ENST00000514110 PLEKHH3Q7Z736 793 aa14.79□□□□□ -0.04
SNHG4-208ENST00000514110 CCAR1Q8IX12 1150 aaKnown RBP14.79□□□□□ -0.04
SNHG4-208ENST00000514110 ANKLE1Q8NAG6 615 aa14.79□□□□□ -0.04
SNHG4-208ENST00000514110 ARMT1Q9H993 441 aa14.79□□□□□ -0.04
SNHG4-208ENST00000514110 DCP1AQ9NPI6 582 aaPredicted RBP14.79□□□□□ -0.04
SNHG4-208ENST00000514110 CACNB2Q08289 660 aaPredicted RBP14.78□□□□□ -0.04
SNHG4-208ENST00000514110 C20orf194Q5TEA3 1177 aa14.78□□□□□ -0.04
SNHG4-208ENST00000514110 SLC44A5Q8NCS7 719 aa14.78□□□□□ -0.04
SNHG4-208ENST00000514110 BOLA2Q9H3K6 86 aa14.78□□□□□ -0.04
SNHG4-208ENST00000514110 RPAP3Q9H6T3 665 aaPredicted RBP14.78□□□□□ -0.04
SNHG4-208ENST00000514110 PAG1Q9NWQ8 432 aa14.78□□□□□ -0.04
SNHG4-208ENST00000514110 RCAN3Q9UKA8 241 aa14.78□□□□□ -0.04
SNHG4-208ENST00000514110 OGDHLQ9ULD0 1010 aa14.78□□□□□ -0.04
SNHG4-208ENST00000514110 A0A1W2PRG0 241 aa14.77□□□□□ -0.05
SNHG4-208ENST00000514110 SPDYE16A6NNV3 312 aaPredicted RBP14.77□□□□□ -0.05
SNHG4-208ENST00000514110 MPHOSPH10O00566 681 aaKnown RBP14.77□□□□□ -0.05
SNHG4-208ENST00000514110 PRKAB2O43741 272 aa14.77□□□□□ -0.05
SNHG4-208ENST00000514110 CHGBP05060 677 aa14.77□□□□□ -0.05
SNHG4-208ENST00000514110 ZKSCAN1P17029 563 aaPredicted RBP14.77□□□□□ -0.05
SNHG4-208ENST00000514110 ATP5JP18859 108 aa14.77□□□□□ -0.05
SNHG4-208ENST00000514110 ADD2P35612 726 aa14.77□□□□□ -0.05
SNHG4-208ENST00000514110 RGS2P41220 211 aa14.77□□□□□ -0.05
SNHG4-208ENST00000514110 LBX2Q6XYB7 198 aa14.77□□□□□ -0.05
SNHG4-208ENST00000514110 TRMT44Q8IYL2 757 aaKnown RBP14.77□□□□□ -0.05
SNHG4-208ENST00000514110 DYNLL2Q96FJ2 89 aa14.77□□□□□ -0.05
SNHG4-208ENST00000514110 APBA2Q99767 749 aa14.77□□□□□ -0.05
SNHG4-208ENST00000514110 BTBD7Q9P203 1132 aa14.77□□□□□ -0.05
SNHG4-208ENST00000514110 TRIOBPQ9H2D6 2365 aa14.77□□□□□ -0.05
SNHG4-208ENST00000514110 SZT2Q5T011 3432 aa14.77□□□□□ -0.05
SNHG4-208ENST00000514110 SMIM22K7EJ46 135 aa14.76□□□□□ -0.05
SNHG4-208ENST00000514110 MBD4O95243 580 aa14.76□□□□□ -0.05
SNHG4-208ENST00000514110 CCND3P30281 292 aaPredicted RBP14.76□□□□□ -0.05
SNHG4-208ENST00000514110 HAUS7Q99871 368 aa14.76□□□□□ -0.05
SNHG4-208ENST00000514110 NBPF3Q9H094 633 aa14.76□□□□□ -0.05
SNHG4-208ENST00000514110 CWC22Q9HCG8 908 aaKnown RBP14.76□□□□□ -0.05
SNHG4-208ENST00000514110 PTPREP23469 700 aa14.75□□□□□ -0.05
SNHG4-208ENST00000514110 CCNA1P78396 465 aa14.75□□□□□ -0.05
SNHG4-208ENST00000514110 MAP2K5Q13163 448 aa14.75□□□□□ -0.05
SNHG4-208ENST00000514110 KIAA1755Q5JYT7 1200 aa14.75□□□□□ -0.05
SNHG4-208ENST00000514110 WDR78Q5VTH9 848 aa14.75□□□□□ -0.05
SNHG4-208ENST00000514110 C7orf61Q8IZ16 206 aa14.75□□□□□ -0.05
SNHG4-208ENST00000514110 CHMP4BQ9H444 224 aaKnown RBP14.75□□□□□ -0.05
SNHG4-208ENST00000514110 C11orf49Q9H6J7 331 aa14.75□□□□□ -0.05
SNHG4-208ENST00000514110 FLRT1Q9NZU1 646 aa14.75□□□□□ -0.05
SNHG4-208ENST00000514110 STAP2Q9UGK3 403 aa14.75□□□□□ -0.05
SNHG4-208ENST00000514110 CYP2D7A0A087X1C5 515 aa14.74□□□□□ -0.05
SNHG4-208ENST00000514110 SMARCA5O60264 1052 aaPredicted RBP14.74□□□□□ -0.05
SNHG4-208ENST00000514110 LHX8Q68G74 356 aa14.74□□□□□ -0.05
SNHG4-208ENST00000514110 TMEM179Q6ZVK1 233 aa14.74□□□□□ -0.05
SNHG4-208ENST00000514110 CLEC10AQ8IUN9 316 aa14.74□□□□□ -0.05
SNHG4-208ENST00000514110 SIAH1Q8IUQ4 282 aa14.74□□□□□ -0.05
SNHG4-208ENST00000514110 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms