RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 DYNC1LI2O43237 492 aaPredicted RBP6.49□□□□□ -1.37
NIPBL-207ENST00000513819 LRIG2O94898 1065 aa6.49□□□□□ -1.37
NIPBL-207ENST00000513819 UBOX5O94941 541 aa6.49□□□□□ -1.37
NIPBL-207ENST00000513819 RXRBP28702 533 aa6.49□□□□□ -1.37
NIPBL-207ENST00000513819 GBP1P32455 592 aa6.49□□□□□ -1.37
NIPBL-207ENST00000513819 TDRD10Q5VZ19 366 aaKnown RBP6.49□□□□□ -1.37
NIPBL-207ENST00000513819 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.49□□□□□ -1.37
NIPBL-207ENST00000513819 TMEM192Q8IY95 271 aa6.49□□□□□ -1.37
NIPBL-207ENST00000513819 ARMC10Q8N2F6 343 aa6.49□□□□□ -1.37
NIPBL-207ENST00000513819 CYB5D2Q8WUJ1 264 aa6.49□□□□□ -1.37
NIPBL-207ENST00000513819 UTP4Q969X6 686 aaKnown RBP6.49□□□□□ -1.37
NIPBL-207ENST00000513819 SLC6A18Q96N87 628 aa6.49□□□□□ -1.37
NIPBL-207ENST00000513819 DNAJC7Q99615 494 aa6.49□□□□□ -1.37
NIPBL-207ENST00000513819 PHAXQ9H814 394 aaKnown RBP6.49□□□□□ -1.37
NIPBL-207ENST00000513819 MRPL42Q9Y6G3 142 aaKnown RBP6.49□□□□□ -1.37
NIPBL-207ENST00000513819 BMP3P12645 472 aa6.48□□□□□ -1.37
NIPBL-207ENST00000513819 GNPTABQ3T906 1256 aa6.48□□□□□ -1.37
NIPBL-207ENST00000513819 KIAA1211LQ6NV74 962 aa6.48□□□□□ -1.37
NIPBL-207ENST00000513819 LRP10Q7Z4F1 713 aa6.48□□□□□ -1.37
NIPBL-207ENST00000513819 NLGN1Q8N2Q7 840 aa6.48□□□□□ -1.37
NIPBL-207ENST00000513819 KLHL6Q8WZ60 621 aa6.48□□□□□ -1.37
NIPBL-207ENST00000513819 RBAK-RBAKDNI3L0D1 243 aa6.47□□□□□ -1.37
NIPBL-207ENST00000513819 MAP4P27816 1152 aaKnown RBP6.47□□□□□ -1.37
NIPBL-207ENST00000513819 CCNFP41002 786 aa6.47□□□□□ -1.37
NIPBL-207ENST00000513819 CHRNA4P43681 627 aa6.47□□□□□ -1.37
NIPBL-207ENST00000513819 SLC7A5Q01650 507 aa6.47□□□□□ -1.37
NIPBL-207ENST00000513819 IFRD2Q12894 506 aaPredicted RBP6.47□□□□□ -1.37
NIPBL-207ENST00000513819 RASGRF1Q13972 1273 aa6.47□□□□□ -1.37
NIPBL-207ENST00000513819 SDE2Q6IQ49 451 aa6.47□□□□□ -1.37
NIPBL-207ENST00000513819 TXNRD3Q86VQ6 643 aa6.47□□□□□ -1.37
NIPBL-207ENST00000513819 PPFIBP1Q86W92 1011 aa6.47□□□□□ -1.37
NIPBL-207ENST00000513819 DZIP1LQ8IYY4 767 aaKnown RBP6.47□□□□□ -1.37
NIPBL-207ENST00000513819 MFSD2AQ8NA29 543 aa6.47□□□□□ -1.37
NIPBL-207ENST00000513819 RIN3Q8TB24 985 aa6.47□□□□□ -1.37
NIPBL-207ENST00000513819 PPP1R13LQ8WUF5 828 aa6.47□□□□□ -1.37
NIPBL-207ENST00000513819 EZH1Q92800 747 aaPredicted RBP6.47□□□□□ -1.37
NIPBL-207ENST00000513819 ZNF512BQ96KM6 892 aaPredicted RBP6.47□□□□□ -1.37
NIPBL-207ENST00000513819 MIPEPQ99797 713 aa6.47□□□□□ -1.37
NIPBL-207ENST00000513819 YIPF2Q9BWQ6 316 aa6.47□□□□□ -1.37
NIPBL-207ENST00000513819 ZNF214Q9UL59 606 aaPredicted RBP6.47□□□□□ -1.37
NIPBL-207ENST00000513819 KRBA1A5PL33 1030 aa6.46□□□□□ -1.38
NIPBL-207ENST00000513819 C9IYK1 514 aa6.46□□□□□ -1.38
NIPBL-207ENST00000513819 CLEC3AO75596 197 aa6.46□□□□□ -1.38
NIPBL-207ENST00000513819 TP53P04637 393 aaPredicted RBP6.46□□□□□ -1.38
NIPBL-207ENST00000513819 PMS1P54277 932 aaKnown RBP6.46□□□□□ -1.38
NIPBL-207ENST00000513819 CDK5R2Q13319 367 aa6.46□□□□□ -1.38
NIPBL-207ENST00000513819 NCAPHQ15003 741 aa6.46□□□□□ -1.38
NIPBL-207ENST00000513819 UVSSAQ2YD98 709 aa6.46□□□□□ -1.38
NIPBL-207ENST00000513819 LETMD1Q6P1Q0 360 aa6.46□□□□□ -1.38
NIPBL-207ENST00000513819 SPATC1Q76KD6 591 aa6.46□□□□□ -1.38
NIPBL-207ENST00000513819 CDH24Q86UP0 819 aa6.46□□□□□ -1.38
NIPBL-207ENST00000513819 LILRB2Q8N423 598 aa6.46□□□□□ -1.38
NIPBL-207ENST00000513819 RNPC3Q96LT9 517 aaKnown RBP6.46□□□□□ -1.38
NIPBL-207ENST00000513819 MYRFLQ96LU7 910 aa6.46□□□□□ -1.38
NIPBL-207ENST00000513819 KCNF1Q9H3M0 494 aa6.46□□□□□ -1.38
NIPBL-207ENST00000513819 KANSL2Q9H9L4 492 aa6.46□□□□□ -1.38
NIPBL-207ENST00000513819 SUCOQ9UBS9 1254 aaKnown RBP6.46□□□□□ -1.38
NIPBL-207ENST00000513819 PFDN2Q9UHV9 154 aa6.46□□□□□ -1.38
NIPBL-207ENST00000513819 FAM95CA0A1B0GW59 222 aa6.45□□□□□ -1.38
NIPBL-207ENST00000513819 SLITRK5O94991 958 aa6.45□□□□□ -1.38
NIPBL-207ENST00000513819 MAP7Q14244 749 aa6.45□□□□□ -1.38
NIPBL-207ENST00000513819 NFKBIBQ15653 356 aa6.45□□□□□ -1.38
NIPBL-207ENST00000513819 MTERF2Q49AM1 385 aa6.45□□□□□ -1.38
NIPBL-207ENST00000513819 SEZ6L2Q6UXD5 910 aa6.45□□□□□ -1.38
NIPBL-207ENST00000513819 ALYREFQ86V81 257 aaKnown RBP6.45□□□□□ -1.38
NIPBL-207ENST00000513819 FAM20CQ8IXL6 584 aa6.45□□□□□ -1.38
NIPBL-207ENST00000513819 DNAJB8Q8NHS0 232 aa6.45□□□□□ -1.38
NIPBL-207ENST00000513819 DHRS1Q96LJ7 313 aa6.45□□□□□ -1.38
NIPBL-207ENST00000513819 PSMG3-AS1Q96PY0 264 aa6.45□□□□□ -1.38
NIPBL-207ENST00000513819 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.45□□□□□ -1.38
NIPBL-207ENST00000513819 CEP131Q9UPN4 1083 aa6.45□□□□□ -1.38
NIPBL-207ENST00000513819 C1QTNF9BB2RNN3 333 aa6.44□□□□□ -1.38
NIPBL-207ENST00000513819 SUSD5O60279 629 aa6.44□□□□□ -1.38
NIPBL-207ENST00000513819 DIAPH1O60610 1272 aaKnown RBP6.44□□□□□ -1.38
NIPBL-207ENST00000513819 CHMP4BP1P59074 171 aa6.44□□□□□ -1.38
NIPBL-207ENST00000513819 AXDND1Q5T1B0 1012 aaPredicted RBP6.44□□□□□ -1.38
NIPBL-207ENST00000513819 EEPD1Q7L9B9 569 aa6.44□□□□□ -1.38
NIPBL-207ENST00000513819 CD163Q86VB7 1156 aa6.44□□□□□ -1.38
NIPBL-207ENST00000513819 TOP6BLQ8N6T0 577 aa6.44□□□□□ -1.38
NIPBL-207ENST00000513819 SH3TC2Q8TF17 1288 aa6.44□□□□□ -1.38
NIPBL-207ENST00000513819 PRDM10Q9NQV6 1147 aa6.44□□□□□ -1.38
NIPBL-207ENST00000513819 C1GALT1Q9NS00 363 aa6.44□□□□□ -1.38
NIPBL-207ENST00000513819 TCEAL1Q15170 157 aa6.43□□□□□ -1.38
NIPBL-207ENST00000513819 BBS9Q3SYG4 887 aa6.43□□□□□ -1.38
NIPBL-207ENST00000513819 DCAF15Q66K64 600 aa6.43□□□□□ -1.38
NIPBL-207ENST00000513819 BEND4Q6ZU67 534 aa6.43□□□□□ -1.38
NIPBL-207ENST00000513819 CCDC144CPQ8IYA2 1237 aa6.43□□□□□ -1.38
NIPBL-207ENST00000513819 ST13P5Q8NFI4 369 aaPredicted RBP6.43□□□□□ -1.38
NIPBL-207ENST00000513819 DCAF5Q96JK2 942 aa6.43□□□□□ -1.38
NIPBL-207ENST00000513819 KREMEN1Q96MU8 473 aa6.43□□□□□ -1.38
NIPBL-207ENST00000513819 ZMYM5Q9UJ78 669 aa6.43□□□□□ -1.38
NIPBL-207ENST00000513819 KDM2BQ8NHM5 1336 aa6.43□□□□□ -1.38
NIPBL-207ENST00000513819 COL17A1Q9UMD9 1497 aaPredicted RBP6.42□□□□□ -1.38
NIPBL-207ENST00000513819 DHX15O43143 795 aaKnown RBP6.42□□□□□ -1.38
NIPBL-207ENST00000513819 LEFTY1O75610 366 aa6.42□□□□□ -1.38
NIPBL-207ENST00000513819 EPHX1P07099 455 aa6.42□□□□□ -1.38
NIPBL-207ENST00000513819 SSRP1Q08945 709 aaKnown RBP6.42□□□□□ -1.38
NIPBL-207ENST00000513819 SLC10A6Q3KNW5 377 aa6.42□□□□□ -1.38
NIPBL-207ENST00000513819 NBPF12Q5TAG4 269 aaPredicted RBP6.42□□□□□ -1.38
NIPBL-207ENST00000513819 PAOXQ6QHF9 649 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms