RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 DGKHQ86XP1 1220 aa12.73□□□□□ -0.37
PFDN1-204ENST00000512707 ZKSCAN3Q9BRR0 538 aa12.73□□□□□ -0.37
PFDN1-204ENST00000512707 LRRC2Q9BYS8 371 aa12.73□□□□□ -0.37
PFDN1-204ENST00000512707 DNAJC18Q9H819 358 aa12.73□□□□□ -0.37
PFDN1-204ENST00000512707 KAT14Q9H8E8 782 aa12.73□□□□□ -0.37
PFDN1-204ENST00000512707 KANSL2Q9H9L4 492 aa12.73□□□□□ -0.37
PFDN1-204ENST00000512707 STX8Q9UNK0 236 aa12.73□□□□□ -0.37
PFDN1-204ENST00000512707 SLC12A7Q9Y666 1083 aa12.73□□□□□ -0.37
PFDN1-204ENST00000512707 TACC3Q9Y6A5 838 aa12.73□□□□□ -0.37
PFDN1-204ENST00000512707 CTNND1O60716 968 aaKnown RBP12.72□□□□□ -0.37
PFDN1-204ENST00000512707 ASNSP08243 561 aa12.72□□□□□ -0.37
PFDN1-204ENST00000512707 CALM1P0DP23 149 aa12.72□□□□□ -0.37
PFDN1-204ENST00000512707 CALM2P0DP24 149 aa12.72□□□□□ -0.37
PFDN1-204ENST00000512707 CALM3P0DP25 149 aa12.72□□□□□ -0.37
PFDN1-204ENST00000512707 AKR1B1P15121 316 aa12.72□□□□□ -0.37
PFDN1-204ENST00000512707 IREB2P48200 963 aaKnown RBP12.72□□□□□ -0.37
PFDN1-204ENST00000512707 CATIPQ7Z7H3 387 aa12.72□□□□□ -0.37
PFDN1-204ENST00000512707 ENAHQ8N8S7 591 aaPredicted RBP12.72□□□□□ -0.37
PFDN1-204ENST00000512707 IGDCC4Q8TDY8 1250 aa12.72□□□□□ -0.37
PFDN1-204ENST00000512707 CDCA5Q96FF9 252 aa12.72□□□□□ -0.37
PFDN1-204ENST00000512707 AGXT2Q9BYV1 514 aa12.72□□□□□ -0.37
PFDN1-204ENST00000512707 SH2D4AQ9H788 454 aa12.72□□□□□ -0.37
PFDN1-204ENST00000512707 LY9Q9HBG7 655 aa12.72□□□□□ -0.37
PFDN1-204ENST00000512707 MYH8P13535 1937 aa12.72□□□□□ -0.37
PFDN1-204ENST00000512707 KLF18A0A0U1RQI7 1052 aa12.71□□□□□ -0.37
PFDN1-204ENST00000512707 GOLGA8BA8MQT2 603 aa12.71□□□□□ -0.37
PFDN1-204ENST00000512707 DHX16O60231 1041 aaKnown RBP12.71□□□□□ -0.37
PFDN1-204ENST00000512707 GDF11O95390 407 aa12.71□□□□□ -0.37
PFDN1-204ENST00000512707 TTLL1O95922 423 aa12.71□□□□□ -0.37
PFDN1-204ENST00000512707 CAP2P40123 477 aa12.71□□□□□ -0.37
PFDN1-204ENST00000512707 RCAN1P53805 252 aa12.71□□□□□ -0.37
PFDN1-204ENST00000512707 ICA1Q05084 483 aa12.71□□□□□ -0.37
PFDN1-204ENST00000512707 TOB2Q14106 344 aaPredicted RBP12.71□□□□□ -0.37
PFDN1-204ENST00000512707 TTLL12Q14166 644 aaPredicted RBP12.71□□□□□ -0.37
PFDN1-204ENST00000512707 RAB3GAP1Q15042 981 aa12.71□□□□□ -0.37
PFDN1-204ENST00000512707 PRAMEF18Q5VWM3 479 aa12.71□□□□□ -0.37
PFDN1-204ENST00000512707 CHADLQ6NUI6 762 aa12.71□□□□□ -0.37
PFDN1-204ENST00000512707 SGMS1Q86VZ5 419 aa12.71□□□□□ -0.37
PFDN1-204ENST00000512707 CDAN1Q8IWY9 1227 aa12.71□□□□□ -0.37
PFDN1-204ENST00000512707 ZNF274Q96GC6 653 aaPredicted RBP12.71□□□□□ -0.37
PFDN1-204ENST00000512707 WRNIP1Q96S55 665 aa12.71□□□□□ -0.37
PFDN1-204ENST00000512707 GLIS2Q9BZE0 524 aaPredicted RBP12.71□□□□□ -0.37
PFDN1-204ENST00000512707 ARHGEF10LQ9HCE6 1279 aa12.71□□□□□ -0.37
PFDN1-204ENST00000512707 PICK1Q9NRD5 415 aa12.71□□□□□ -0.37
PFDN1-204ENST00000512707 SIPA1L1O43166 1804 aa12.71□□□□□ -0.38
PFDN1-204ENST00000512707 CCDC196A0A1B0GTZ2 297 aa12.7□□□□□ -0.38
PFDN1-204ENST00000512707 ZBTB43O43298 467 aa12.7□□□□□ -0.38
PFDN1-204ENST00000512707 GH2P01242 217 aa12.7□□□□□ -0.38
PFDN1-204ENST00000512707 TOP1P11387 765 aaKnown RBP12.7□□□□□ -0.38
PFDN1-204ENST00000512707 ATP2B2Q01814 1243 aa12.7□□□□□ -0.38
PFDN1-204ENST00000512707 APOBRQ0VD83 1088 aa12.7□□□□□ -0.38
PFDN1-204ENST00000512707 MAP1SQ66K74 1059 aaPredicted RBP12.7□□□□□ -0.38
PFDN1-204ENST00000512707 CPLX2Q6PUV4 134 aaKnown RBP12.7□□□□□ -0.38
PFDN1-204ENST00000512707 ARMC9Q7Z3E5 817 aa12.7□□□□□ -0.38
PFDN1-204ENST00000512707 CEP95Q96GE4 821 aa12.7□□□□□ -0.38
PFDN1-204ENST00000512707 TBC1D2Q9BYX2 928 aa12.7□□□□□ -0.38
PFDN1-204ENST00000512707 SLKQ9H2G2 1235 aaPredicted RBP12.7□□□□□ -0.38
PFDN1-204ENST00000512707 MTMR4Q9NYA4 1195 aa12.7□□□□□ -0.38
PFDN1-204ENST00000512707 ZBTB21Q9ULJ3 1066 aa12.7□□□□□ -0.38
PFDN1-204ENST00000512707 CSADQ9Y600 493 aa12.7□□□□□ -0.38
PFDN1-204ENST00000512707 NMT2O60551 498 aa12.69□□□□□ -0.38
PFDN1-204ENST00000512707 DDAH1O94760 285 aa12.69□□□□□ -0.38
PFDN1-204ENST00000512707 CD2BP2O95400 341 aaKnown RBP12.69□□□□□ -0.38
PFDN1-204ENST00000512707 KIF5BP33176 963 aa12.69□□□□□ -0.38
PFDN1-204ENST00000512707 METAP2P50579 478 aaKnown RBP eCLIP12.69□□□□□ -0.38
PFDN1-204ENST00000512707 EVCP57679 992 aa12.69□□□□□ -0.38
PFDN1-204ENST00000512707 SEPT2Q15019 361 aa12.69□□□□□ -0.38
PFDN1-204ENST00000512707 PPP2R5BQ15173 497 aa12.69□□□□□ -0.38
PFDN1-204ENST00000512707 SEC23AQ15436 765 aa12.69□□□□□ -0.38
PFDN1-204ENST00000512707 APOA5Q6Q788 366 aa12.69□□□□□ -0.38
PFDN1-204ENST00000512707 PNMA1Q8ND90 353 aa12.69□□□□□ -0.38
PFDN1-204ENST00000512707 ANKS1AQ92625 1134 aa12.69□□□□□ -0.38
PFDN1-204ENST00000512707 TMX3Q96JJ7 454 aa12.69□□□□□ -0.38
PFDN1-204ENST00000512707 IPO9Q96P70 1041 aaKnown RBP12.69□□□□□ -0.38
PFDN1-204ENST00000512707 AS3MTQ9HBK9 375 aa12.69□□□□□ -0.38
PFDN1-204ENST00000512707 IL17RBQ9NRM6 502 aa12.69□□□□□ -0.38
PFDN1-204ENST00000512707 NYAP2Q9P242 653 aa12.69□□□□□ -0.38
PFDN1-204ENST00000512707 ZNF112Q9UJU3 913 aa12.69□□□□□ -0.38
PFDN1-204ENST00000512707 TPCN1Q9ULQ1 816 aa12.69□□□□□ -0.38
PFDN1-204ENST00000512707 SYNPO2Q9UMS6 1093 aa12.69□□□□□ -0.38
PFDN1-204ENST00000512707 IGKV6D-41A0A0C4DH26 115 aa12.68□□□□□ -0.38
PFDN1-204ENST00000512707 GOLGA8AA7E2F4 631 aa12.68□□□□□ -0.38
PFDN1-204ENST00000512707 PHF20L1A8MW92 1017 aa12.68□□□□□ -0.38
PFDN1-204ENST00000512707 CPLX1O14810 134 aa12.68□□□□□ -0.38
PFDN1-204ENST00000512707 POTEIP0CG38 1075 aa12.68□□□□□ -0.38
PFDN1-204ENST00000512707 POTEJP0CG39 1038 aa12.68□□□□□ -0.38
PFDN1-204ENST00000512707 FKBP1BP68106 108 aa12.68□□□□□ -0.38
PFDN1-204ENST00000512707 STK3Q13188 491 aa12.68□□□□□ -0.38
PFDN1-204ENST00000512707 PRKG1Q13976 671 aa12.68□□□□□ -0.38
PFDN1-204ENST00000512707 COL9A3Q14050 684 aaPredicted RBP12.68□□□□□ -0.38
PFDN1-204ENST00000512707 MICU3Q86XE3 530 aa12.68□□□□□ -0.38
PFDN1-204ENST00000512707 SCYL3Q8IZE3 742 aa12.68□□□□□ -0.38
PFDN1-204ENST00000512707 ZNF654Q8IZM8 581 aa12.68□□□□□ -0.38
PFDN1-204ENST00000512707 CTCFLQ8NI51 663 aaPredicted RBP12.68□□□□□ -0.38
PFDN1-204ENST00000512707 ZNF408Q9H9D4 720 aa12.68□□□□□ -0.38
PFDN1-204ENST00000512707 GPHNQ9NQX3 736 aaPredicted RBP12.68□□□□□ -0.38
PFDN1-204ENST00000512707 CLIP2Q9UDT6 1046 aa12.68□□□□□ -0.38
PFDN1-204ENST00000512707 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.68□□□□□ -0.38
PFDN1-204ENST00000512707 UNCXA6NJT0 531 aa12.67□□□□□ -0.38
PFDN1-204ENST00000512707 USP17L5A8MUK1 530 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms