RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 TMEM87AQ8NBN3 555 aa8.14□□□□□ -1.11
UBE2D3-225ENST00000508476 ZNF296Q8WUU4 475 aaPredicted RBP8.14□□□□□ -1.11
UBE2D3-225ENST00000508476 Q96M66 194 aa8.14□□□□□ -1.11
UBE2D3-225ENST00000508476 BACH2Q9BYV9 841 aa8.14□□□□□ -1.11
UBE2D3-225ENST00000508476 KCNQ5Q9NR82 932 aa8.14□□□□□ -1.11
UBE2D3-225ENST00000508476 WASH4PA8MWX3 477 aa8.13□□□□□ -1.11
UBE2D3-225ENST00000508476 GREM1O60565 184 aa8.13□□□□□ -1.11
UBE2D3-225ENST00000508476 DIEXFQ68CQ4 756 aaKnown RBP8.13□□□□□ -1.11
UBE2D3-225ENST00000508476 CYB5D2Q8WUJ1 264 aa8.13□□□□□ -1.11
UBE2D3-225ENST00000508476 BRMS1Q9HCU9 246 aa8.13□□□□□ -1.11
UBE2D3-225ENST00000508476 UBP1Q9NZI7 540 aa8.13□□□□□ -1.11
UBE2D3-225ENST00000508476 CEP131Q9UPN4 1083 aa8.13□□□□□ -1.11
UBE2D3-225ENST00000508476 RNF114Q9Y508 228 aa8.13□□□□□ -1.11
UBE2D3-225ENST00000508476 SLC23A3Q6PIS1 610 aa8.12□□□□□ -1.11
UBE2D3-225ENST00000508476 BAHD1Q8TBE0 780 aaPredicted RBP8.12□□□□□ -1.11
UBE2D3-225ENST00000508476 CARS2Q9HA77 564 aaKnown RBP8.12□□□□□ -1.11
UBE2D3-225ENST00000508476 SUPT16HQ9Y5B9 1047 aaKnown RBP8.12□□□□□ -1.11
UBE2D3-225ENST00000508476 CYP7A1P22680 504 aa8.11□□□□□ -1.11
UBE2D3-225ENST00000508476 ETV3P41162 512 aa8.11□□□□□ -1.11
UBE2D3-225ENST00000508476 YARSP54577 528 aaKnown RBP8.11□□□□□ -1.11
UBE2D3-225ENST00000508476 SLFN12Q8IYM2 578 aa8.11□□□□□ -1.11
UBE2D3-225ENST00000508476 UBE2FQ969M7 185 aa8.11□□□□□ -1.11
UBE2D3-225ENST00000508476 FMNL2Q96PY5 1086 aa8.11□□□□□ -1.11
UBE2D3-225ENST00000508476 LRRC3Q9BY71 257 aa8.11□□□□□ -1.11
UBE2D3-225ENST00000508476 ZSWIM5Q9P217 1185 aa8.11□□□□□ -1.11
UBE2D3-225ENST00000508476 LRRN2O75325 713 aa8.1□□□□□ -1.11
UBE2D3-225ENST00000508476 KIR3DL1P43629 444 aa8.1□□□□□ -1.11
UBE2D3-225ENST00000508476 CWF19L2Q2TBE0 894 aaKnown RBP8.1□□□□□ -1.11
UBE2D3-225ENST00000508476 PCDHB14Q9Y5E9 798 aa8.1□□□□□ -1.11
UBE2D3-225ENST00000508476 RBM47A0AV96 593 aaKnown RBP8.09□□□□□ -1.11
UBE2D3-225ENST00000508476 SEZ6Q53EL9 994 aa8.09□□□□□ -1.11
UBE2D3-225ENST00000508476 KIF2CQ99661 725 aa8.09□□□□□ -1.11
UBE2D3-225ENST00000508476 KRTAP4-12Q9BQ66 201 aa8.09□□□□□ -1.11
UBE2D3-225ENST00000508476 CARMIL2Q6F5E8 1435 aa8.09□□□□□ -1.11
UBE2D3-225ENST00000508476 JUNBP17275 347 aaPredicted RBP8.08□□□□□ -1.12
UBE2D3-225ENST00000508476 TNNI2P48788 182 aa8.08□□□□□ -1.12
UBE2D3-225ENST00000508476 FANCCQ00597 558 aa8.08□□□□□ -1.12
UBE2D3-225ENST00000508476 ATG4DQ86TL0 474 aaPredicted RBP8.08□□□□□ -1.12
UBE2D3-225ENST00000508476 PHACTR4Q8IZ21 702 aa8.08□□□□□ -1.12
UBE2D3-225ENST00000508476 COX4I2Q96KJ9 171 aa8.08□□□□□ -1.12
UBE2D3-225ENST00000508476 BCL11AQ9H165 835 aa8.08□□□□□ -1.12
UBE2D3-225ENST00000508476 DUSP15Q9H1R2 295 aaPredicted RBP8.08□□□□□ -1.12
UBE2D3-225ENST00000508476 PCDHGB7Q9Y5F8 929 aa8.08□□□□□ -1.12
UBE2D3-225ENST00000508476 ROBO2Q9HCK4 1378 aa8.08□□□□□ -1.12
UBE2D3-225ENST00000508476 SLC22A31A6NKX4 558 aa8.07□□□□□ -1.12
UBE2D3-225ENST00000508476 ZNF76P36508 570 aa8.07□□□□□ -1.12
UBE2D3-225ENST00000508476 CLCQ05315 142 aa8.07□□□□□ -1.12
UBE2D3-225ENST00000508476 APOBRQ0VD83 1088 aa8.07□□□□□ -1.12
UBE2D3-225ENST00000508476 ZNF394Q53GI3 561 aa8.07□□□□□ -1.12
UBE2D3-225ENST00000508476 ARSHQ5FYA8 562 aa8.07□□□□□ -1.12
UBE2D3-225ENST00000508476 THAP5Q7Z6K1 395 aa8.07□□□□□ -1.12
UBE2D3-225ENST00000508476 DTWD2Q8NBA8 298 aa8.07□□□□□ -1.12
UBE2D3-225ENST00000508476 EAF1Q96JC9 268 aaPredicted RBP8.07□□□□□ -1.12
UBE2D3-225ENST00000508476 CCDC74BQ96LY2 380 aa8.07□□□□□ -1.12
UBE2D3-225ENST00000508476 KREMEN1Q96MU8 473 aa8.07□□□□□ -1.12
UBE2D3-225ENST00000508476 LMCD1Q9NZU5 365 aa8.07□□□□□ -1.12
UBE2D3-225ENST00000508476 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.07□□□□□ -1.12
UBE2D3-225ENST00000508476 RECKO95980 971 aa8.06□□□□□ -1.12
UBE2D3-225ENST00000508476 ESR1P03372 595 aa8.06□□□□□ -1.12
UBE2D3-225ENST00000508476 GK5Q6ZS86 529 aa8.06□□□□□ -1.12
UBE2D3-225ENST00000508476 PIWIL2Q8TC59 973 aaKnown RBP8.06□□□□□ -1.12
UBE2D3-225ENST00000508476 ASIC4Q96FT7 647 aa8.06□□□□□ -1.12
UBE2D3-225ENST00000508476 ANTXR1Q9H6X2 564 aa8.06□□□□□ -1.12
UBE2D3-225ENST00000508476 C19orf73Q9NVV2 129 aa8.06□□□□□ -1.12
UBE2D3-225ENST00000508476 CTNND2Q9UQB3 1225 aa8.06□□□□□ -1.12
UBE2D3-225ENST00000508476 ATE1O95260 518 aa8.05□□□□□ -1.12
UBE2D3-225ENST00000508476 POLR2BP30876 1174 aaKnown RBP8.05□□□□□ -1.12
UBE2D3-225ENST00000508476 OVOS1Q6IE37 1185 aa8.05□□□□□ -1.12
UBE2D3-225ENST00000508476 RNF141Q8WVD5 230 aa8.05□□□□□ -1.12
UBE2D3-225ENST00000508476 SPON2Q9BUD6 331 aa8.05□□□□□ -1.12
UBE2D3-225ENST00000508476 BIN1O00499 593 aa8.04□□□□□ -1.12
UBE2D3-225ENST00000508476 UBOX5O94941 541 aa8.04□□□□□ -1.12
UBE2D3-225ENST00000508476 MCM4P33991 863 aa8.04□□□□□ -1.12
UBE2D3-225ENST00000508476 FYB2Q5VWT5 728 aa8.04□□□□□ -1.12
UBE2D3-225ENST00000508476 USP48Q86UV5 1035 aa8.04□□□□□ -1.12
UBE2D3-225ENST00000508476 KRTAP19-1Q8IUB9 90 aa8.04□□□□□ -1.12
UBE2D3-225ENST00000508476 KIAA0825Q8IV33 1275 aa8.04□□□□□ -1.12
UBE2D3-225ENST00000508476 FLAD1Q8NFF5 587 aa8.04□□□□□ -1.12
UBE2D3-225ENST00000508476 FAM168AQ92567 244 aa8.04□□□□□ -1.12
UBE2D3-225ENST00000508476 EHMT1Q9H9B1 1298 aa8.04□□□□□ -1.12
UBE2D3-225ENST00000508476 SHISA3A0PJX4 238 aa8.03□□□□□ -1.12
UBE2D3-225ENST00000508476 RGS13O14921 159 aa8.03□□□□□ -1.12
UBE2D3-225ENST00000508476 SRFP11831 508 aa8.03□□□□□ -1.12
UBE2D3-225ENST00000508476 TPP2P29144 1249 aaPredicted RBP8.03□□□□□ -1.12
UBE2D3-225ENST00000508476 GBP1P32455 592 aa8.03□□□□□ -1.12
UBE2D3-225ENST00000508476 GAB4Q2WGN9 574 aa8.03□□□□□ -1.12
UBE2D3-225ENST00000508476 OGFOD2Q6N063 350 aa8.03□□□□□ -1.12
UBE2D3-225ENST00000508476 CREG2Q8IUH2 290 aa8.03□□□□□ -1.12
UBE2D3-225ENST00000508476 NKD1Q969G9 470 aa8.03□□□□□ -1.12
UBE2D3-225ENST00000508476 VWCEQ96DN2 955 aa8.03□□□□□ -1.12
UBE2D3-225ENST00000508476 NT5C1AQ9BXI3 368 aa8.03□□□□□ -1.12
UBE2D3-225ENST00000508476 SLAMF8Q9P0V8 285 aa8.03□□□□□ -1.12
UBE2D3-225ENST00000508476 GMIPQ9P107 970 aa8.03□□□□□ -1.12
UBE2D3-225ENST00000508476 RAG1P15918 1043 aa8.02□□□□□ -1.13
UBE2D3-225ENST00000508476 TXKP42681 527 aa8.02□□□□□ -1.13
UBE2D3-225ENST00000508476 RACK1P63244 317 aaKnown RBP8.02□□□□□ -1.13
UBE2D3-225ENST00000508476 RALGPS1Q5JS13 557 aa8.02□□□□□ -1.13
UBE2D3-225ENST00000508476 SLITRK4Q8IW52 837 aa8.02□□□□□ -1.13
UBE2D3-225ENST00000508476 ATG4CQ96DT6 458 aa8.02□□□□□ -1.13
UBE2D3-225ENST00000508476 GPR62Q9BZJ7 368 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms