RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 SARM1Q6SZW1 724 aa20.34■□□□□ 0.85
SFXN1-208ENST00000507823 TNFRSF25Q93038 417 aa20.34■□□□□ 0.85
SFXN1-208ENST00000507823 SDF4Q9BRK5 362 aa20.34■□□□□ 0.85
SFXN1-208ENST00000507823 V9GY48 417 aaPredicted RBP20.34■□□□□ 0.85
SFXN1-208ENST00000507823 NR5A1Q13285 461 aa20.34■□□□□ 0.85
SFXN1-208ENST00000507823 PLA2G4DQ86XP0 818 aa20.34■□□□□ 0.85
SFXN1-208ENST00000507823 KRI1Q8N9T8 703 aaKnown RBP20.34■□□□□ 0.85
SFXN1-208ENST00000507823 ZNF579Q8NAF0 562 aaKnown RBP20.34■□□□□ 0.85
SFXN1-208ENST00000507823 OXER1Q8TDS5 423 aa20.34■□□□□ 0.85
SFXN1-208ENST00000507823 BPIFA3Q9BQP9 254 aa20.34■□□□□ 0.85
SFXN1-208ENST00000507823 PTMAP06454 111 aaKnown RBP20.33■□□□□ 0.85
SFXN1-208ENST00000507823 ALDH1B1P30837 517 aa20.33■□□□□ 0.85
SFXN1-208ENST00000507823 PDE6BP35913 854 aa20.33■□□□□ 0.85
SFXN1-208ENST00000507823 C16orf86Q6ZW13 317 aa20.33■□□□□ 0.85
SFXN1-208ENST00000507823 DYNLL2Q96FJ2 89 aa20.33■□□□□ 0.85
SFXN1-208ENST00000507823 FBXO2Q9UK22 296 aaPredicted RBP20.33■□□□□ 0.85
SFXN1-208ENST00000507823 MYH1P12882 1939 aa20.33■□□□□ 0.85
SFXN1-208ENST00000507823 SNED1Q8TER0 1413 aa20.33■□□□□ 0.85
SFXN1-208ENST00000507823 C6orf229H3BNL8 230 aa20.33■□□□□ 0.84
SFXN1-208ENST00000507823 KIF5BP33176 963 aa20.33■□□□□ 0.84
SFXN1-208ENST00000507823 RASA1P20936 1047 aa20.32■□□□□ 0.84
SFXN1-208ENST00000507823 KRT2P35908 639 aa20.32■□□□□ 0.84
SFXN1-208ENST00000507823 SYKP43405 635 aa20.32■□□□□ 0.84
SFXN1-208ENST00000507823 PLCD1P51178 756 aa20.32■□□□□ 0.84
SFXN1-208ENST00000507823 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.32■□□□□ 0.84
SFXN1-208ENST00000507823 ZNF287Q9HBT7 754 aa20.32■□□□□ 0.84
SFXN1-208ENST00000507823 VPS54Q9P1Q0 977 aa20.32■□□□□ 0.84
SFXN1-208ENST00000507823 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.32■□□□□ 0.84
SFXN1-208ENST00000507823 TPM3P06753 285 aa20.32■□□□□ 0.84
SFXN1-208ENST00000507823 NOVP48745 357 aa20.32■□□□□ 0.84
SFXN1-208ENST00000507823 GRM4Q14833 912 aa20.32■□□□□ 0.84
SFXN1-208ENST00000507823 TUBE1Q9UJT0 475 aa20.32■□□□□ 0.84
SFXN1-208ENST00000507823 CEP131Q9UPN4 1083 aa20.32■□□□□ 0.84
SFXN1-208ENST00000507823 FLT1P17948 1338 aa20.32■□□□□ 0.84
SFXN1-208ENST00000507823 PFKFB3Q16875 520 aaPredicted RBP20.31■□□□□ 0.84
SFXN1-208ENST00000507823 MAPKAPK5Q8IW41 473 aa20.31■□□□□ 0.84
SFXN1-208ENST00000507823 TEX11Q8IYF3 940 aa20.31■□□□□ 0.84
SFXN1-208ENST00000507823 DHX40Q8IX18 779 aaKnown RBP20.31■□□□□ 0.84
SFXN1-208ENST00000507823 CEP57L1Q8IYX8 460 aa20.31■□□□□ 0.84
SFXN1-208ENST00000507823 MASTLQ96GX5 879 aa20.31■□□□□ 0.84
SFXN1-208ENST00000507823 KAT14Q9H8E8 782 aa20.31■□□□□ 0.84
SFXN1-208ENST00000507823 MKNK2Q9HBH9 465 aa20.31■□□□□ 0.84
SFXN1-208ENST00000507823 SRPRBQ9Y5M8 271 aaKnown RBP20.31■□□□□ 0.84
SFXN1-208ENST00000507823 CDC25BP30305 580 aa20.3■□□□□ 0.84
SFXN1-208ENST00000507823 CLIC6Q96NY7 704 aa20.3■□□□□ 0.84
SFXN1-208ENST00000507823 PCDHB6Q9Y5E3 794 aa20.3■□□□□ 0.84
SFXN1-208ENST00000507823 SCG2P13521 617 aa20.3■□□□□ 0.84
SFXN1-208ENST00000507823 ZNF75DP51815 510 aa20.3■□□□□ 0.84
SFXN1-208ENST00000507823 MPNDQ8N594 471 aa20.3■□□□□ 0.84
SFXN1-208ENST00000507823 PNMA1Q8ND90 353 aa20.3■□□□□ 0.84
SFXN1-208ENST00000507823 NAT10Q9H0A0 1025 aaKnown RBP20.3■□□□□ 0.84
SFXN1-208ENST00000507823 DAGLAQ9Y4D2 1042 aa20.3■□□□□ 0.84
SFXN1-208ENST00000507823 PARP3Q9Y6F1 533 aa20.3■□□□□ 0.84
SFXN1-208ENST00000507823 MMP10P09238 476 aa20.29■□□□□ 0.84
SFXN1-208ENST00000507823 GNAQP50148 359 aa20.29■□□□□ 0.84
SFXN1-208ENST00000507823 ZNF444Q8N0Y2 327 aaPredicted RBP20.29■□□□□ 0.84
SFXN1-208ENST00000507823 FAM177A1Q8N128 213 aaPredicted RBP20.29■□□□□ 0.84
SFXN1-208ENST00000507823 SH3GLB2Q9NR46 395 aa20.29■□□□□ 0.84
SFXN1-208ENST00000507823 BMP15O95972 392 aa20.29■□□□□ 0.84
SFXN1-208ENST00000507823 NLRP12P59046 1061 aa20.29■□□□□ 0.84
SFXN1-208ENST00000507823 NEDD1Q8NHV4 660 aa20.29■□□□□ 0.84
SFXN1-208ENST00000507823 CABP5Q9NP86 173 aa20.29■□□□□ 0.84
SFXN1-208ENST00000507823 PLIN4Q96Q06 1357 aa20.29■□□□□ 0.84
SFXN1-208ENST00000507823 CDK8P49336 464 aa20.28■□□□□ 0.84
SFXN1-208ENST00000507823 GTF2IP78347 998 aa20.28■□□□□ 0.84
SFXN1-208ENST00000507823 BRMS1Q9HCU9 246 aa20.28■□□□□ 0.84
SFXN1-208ENST00000507823 KCNH3Q9ULD8 1083 aa20.28■□□□□ 0.84
SFXN1-208ENST00000507823 TSPY3P0CV98 308 aa20.28■□□□□ 0.84
SFXN1-208ENST00000507823 TSPY8P0CW00 308 aa20.28■□□□□ 0.84
SFXN1-208ENST00000507823 SLC44A5Q8NCS7 719 aa20.28■□□□□ 0.84
SFXN1-208ENST00000507823 OFD1O75665 1012 aa20.27■□□□□ 0.84
SFXN1-208ENST00000507823 ZC3H12CQ9C0D7 883 aaKnown RBP20.27■□□□□ 0.84
SFXN1-208ENST00000507823 SAP30BPQ9UHR5 308 aaKnown RBP20.27■□□□□ 0.84
SFXN1-208ENST00000507823 MAD2L2Q9UI95 211 aa20.27■□□□□ 0.84
SFXN1-208ENST00000507823 USP17L3A6NCW0 530 aa20.27■□□□□ 0.84
SFXN1-208ENST00000507823 USP17L4A6NCW7 530 aa20.27■□□□□ 0.84
SFXN1-208ENST00000507823 TRIM75PA6NK02 468 aa20.27■□□□□ 0.84
SFXN1-208ENST00000507823 GOLGA6L6A8MZA4 724 aa20.27■□□□□ 0.84
SFXN1-208ENST00000507823 EARS2Q5JPH6 523 aaKnown RBP20.27■□□□□ 0.84
SFXN1-208ENST00000507823 KRBA2Q6ZNG9 492 aa20.27■□□□□ 0.84
SFXN1-208ENST00000507823 USP17L1Q7RTZ2 530 aa20.27■□□□□ 0.84
SFXN1-208ENST00000507823 CERS5Q8N5B7 392 aa20.27■□□□□ 0.84
SFXN1-208ENST00000507823 ZNF646O15015 1829 aaPredicted RBP20.27■□□□□ 0.83
SFXN1-208ENST00000507823 C10orf71Q711Q0 1435 aa20.26■□□□□ 0.83
SFXN1-208ENST00000507823 hCG_1642624A0A1W2PR95 340 aa20.26■□□□□ 0.83
SFXN1-208ENST00000507823 PALM3A6NDB9 673 aaPredicted RBP20.26■□□□□ 0.83
SFXN1-208ENST00000507823 GOLGA6L19H0YKK7 550 aa20.26■□□□□ 0.83
SFXN1-208ENST00000507823 TRAPPC10P48553 1259 aa20.26■□□□□ 0.83
SFXN1-208ENST00000507823 PLCB2Q00722 1185 aa20.26■□□□□ 0.83
SFXN1-208ENST00000507823 MDM2Q00987 491 aaPredicted RBP20.26■□□□□ 0.83
SFXN1-208ENST00000507823 DPP8Q6V1X1 898 aaPredicted RBP20.26■□□□□ 0.83
SFXN1-208ENST00000507823 ERCC4Q92889 916 aaPredicted RBP20.26■□□□□ 0.83
SFXN1-208ENST00000507823 MRFAP1L1Q96HT8 127 aa20.26■□□□□ 0.83
SFXN1-208ENST00000507823 TMEM47Q9BQJ4 181 aa20.26■□□□□ 0.83
SFXN1-208ENST00000507823 LZTS2Q9BRK4 669 aa20.26■□□□□ 0.83
SFXN1-208ENST00000507823 RXRBP28702 533 aa20.25■□□□□ 0.83
SFXN1-208ENST00000507823 GABPAQ06546 454 aa20.25■□□□□ 0.83
SFXN1-208ENST00000507823 SLC4A8Q2Y0W8 1093 aa20.25■□□□□ 0.83
SFXN1-208ENST00000507823 DPCR1Q3MIW9 517 aa20.25■□□□□ 0.83
SFXN1-208ENST00000507823 STYK1Q6J9G0 422 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms