RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 CLASRPQ8N2M8 674 aaKnown RBP17.68■□□□□ 0.42
SEC24D-208ENST00000506622 DIS3LQ8TF46 1054 aaKnown RBP17.68■□□□□ 0.42
SEC24D-208ENST00000506622 NBPF3Q9H094 633 aa17.68■□□□□ 0.42
SEC24D-208ENST00000506622 PRO3102Q9H379 93 aa17.68■□□□□ 0.42
SEC24D-208ENST00000506622 ZBED9Q6R2W3 1325 aa17.68■□□□□ 0.42
SEC24D-208ENST00000506622 POLR3DP05423 398 aaPredicted RBP17.67■□□□□ 0.42
SEC24D-208ENST00000506622 PRKAR2AP13861 404 aaKnown RBP17.67■□□□□ 0.42
SEC24D-208ENST00000506622 ZKSCAN1P17029 563 aaPredicted RBP17.67■□□□□ 0.42
SEC24D-208ENST00000506622 RGS2P41220 211 aa17.67■□□□□ 0.42
SEC24D-208ENST00000506622 SLC9C2Q5TAH2 1124 aa17.67■□□□□ 0.42
SEC24D-208ENST00000506622 GPR142Q7Z601 462 aa17.67■□□□□ 0.42
SEC24D-208ENST00000506622 PLEKHH3Q7Z736 793 aa17.67■□□□□ 0.42
SEC24D-208ENST00000506622 ALPK3Q96L96 1907 aa17.67■□□□□ 0.42
SEC24D-208ENST00000506622 C12orf42Q96LP6 360 aa17.67■□□□□ 0.42
SEC24D-208ENST00000506622 PORCNQ9H237 461 aa17.67■□□□□ 0.42
SEC24D-208ENST00000506622 RABGAP1Q9Y3P9 1069 aa17.67■□□□□ 0.42
SEC24D-208ENST00000506622 APBB1O00213 710 aa17.66■□□□□ 0.42
SEC24D-208ENST00000506622 HMMRO75330 724 aa17.66■□□□□ 0.42
SEC24D-208ENST00000506622 GLRX3O76003 335 aaKnown RBP17.66■□□□□ 0.42
SEC24D-208ENST00000506622 PLCD1P51178 756 aa17.66■□□□□ 0.42
SEC24D-208ENST00000506622 CCNA1P78396 465 aa17.66■□□□□ 0.42
SEC24D-208ENST00000506622 MAP3K21Q5TCX8 1036 aa17.66■□□□□ 0.42
SEC24D-208ENST00000506622 RPAP2Q8IXW5 612 aaPredicted RBP17.66■□□□□ 0.42
SEC24D-208ENST00000506622 KIF1BPQ96EK5 621 aa17.66■□□□□ 0.42
SEC24D-208ENST00000506622 RIOK1Q9BRS2 568 aaKnown RBP17.66■□□□□ 0.42
SEC24D-208ENST00000506622 CRNKL1Q9BZJ0 848 aaKnown RBP17.66■□□□□ 0.42
SEC24D-208ENST00000506622 KIAA1683Q9H0B3 1180 aa17.66■□□□□ 0.42
SEC24D-208ENST00000506622 OGDHLQ9ULD0 1010 aa17.66■□□□□ 0.42
SEC24D-208ENST00000506622 A0A1W2PPC1 479 aa17.65■□□□□ 0.42
SEC24D-208ENST00000506622 IFIT2P09913 472 aaKnown RBP17.65■□□□□ 0.42
SEC24D-208ENST00000506622 CATSPERGQ6ZRH7 1159 aa17.65■□□□□ 0.42
SEC24D-208ENST00000506622 USP6NLQ92738 828 aa17.65■□□□□ 0.42
SEC24D-208ENST00000506622 BCL11AQ9H165 835 aa17.65■□□□□ 0.42
SEC24D-208ENST00000506622 C11orf49Q9H6J7 331 aa17.65■□□□□ 0.42
SEC24D-208ENST00000506622 MCM9Q9NXL9 1143 aa17.65■□□□□ 0.42
SEC24D-208ENST00000506622 GOLIM4O00461 696 aa17.64■□□□□ 0.41
SEC24D-208ENST00000506622 PDE6AP16499 860 aa17.64■□□□□ 0.41
SEC24D-208ENST00000506622 VCAM1P19320 739 aa17.64■□□□□ 0.41
SEC24D-208ENST00000506622 SHMT1P34896 483 aa17.64■□□□□ 0.41
SEC24D-208ENST00000506622 CACNB2Q08289 660 aaPredicted RBP17.64■□□□□ 0.41
SEC24D-208ENST00000506622 MORN1Q5T089 497 aa17.64■□□□□ 0.41
SEC24D-208ENST00000506622 WDR78Q5VTH9 848 aa17.64■□□□□ 0.41
SEC24D-208ENST00000506622 C7orf61Q8IZ16 206 aa17.64■□□□□ 0.41
SEC24D-208ENST00000506622 ACER1Q8TDN7 264 aa17.64■□□□□ 0.41
SEC24D-208ENST00000506622 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.64■□□□□ 0.41
SEC24D-208ENST00000506622 DNAJC2Q99543 621 aaKnown RBP17.64■□□□□ 0.41
SEC24D-208ENST00000506622 STAP2Q9UGK3 403 aa17.64■□□□□ 0.41
SEC24D-208ENST00000506622 DDX19BQ9UMR2 479 aa17.64■□□□□ 0.41
SEC24D-208ENST00000506622 DDX60LQ5H9U9 1706 aaKnown RBP17.63■□□□□ 0.41
SEC24D-208ENST00000506622 ZNF532Q9HCE3 1301 aa17.63■□□□□ 0.41
SEC24D-208ENST00000506622 MPHOSPH10O00566 681 aaKnown RBP17.63■□□□□ 0.41
SEC24D-208ENST00000506622 MAP2K5Q13163 448 aa17.63■□□□□ 0.41
SEC24D-208ENST00000506622 POTEEQ6S8J3 1075 aa17.63■□□□□ 0.41
SEC24D-208ENST00000506622 EDC3Q96F86 508 aaKnown RBP17.63■□□□□ 0.41
SEC24D-208ENST00000506622 APBA2Q99767 749 aa17.63■□□□□ 0.41
SEC24D-208ENST00000506622 NAV1Q8NEY1 1877 aa17.63■□□□□ 0.41
SEC24D-208ENST00000506622 A0A0C4DFX4 3053 aa17.62■□□□□ 0.41
SEC24D-208ENST00000506622 COL6A3P12111 3177 aa17.62■□□□□ 0.41
SEC24D-208ENST00000506622 MNX1P50219 401 aaPredicted RBP17.62■□□□□ 0.41
SEC24D-208ENST00000506622 SEPT2Q15019 361 aa17.62■□□□□ 0.41
SEC24D-208ENST00000506622 CCL14Q16627 93 aa17.62■□□□□ 0.41
SEC24D-208ENST00000506622 IVNS1ABPQ9Y6Y0 642 aa17.62■□□□□ 0.41
SEC24D-208ENST00000506622 MYH8P13535 1937 aa17.61■□□□□ 0.41
SEC24D-208ENST00000506622 RAB11FIP3O75154 756 aa17.61■□□□□ 0.41
SEC24D-208ENST00000506622 CNMDO75829 334 aa17.61■□□□□ 0.41
SEC24D-208ENST00000506622 GABPAQ06546 454 aa17.61■□□□□ 0.41
SEC24D-208ENST00000506622 LBX2Q6XYB7 198 aa17.61■□□□□ 0.41
SEC24D-208ENST00000506622 CHMP4BQ9H444 224 aaKnown RBP17.61■□□□□ 0.41
SEC24D-208ENST00000506622 RPAP3Q9H6T3 665 aaPredicted RBP17.61■□□□□ 0.41
SEC24D-208ENST00000506622 ZMYND8Q9ULU4 1186 aaPredicted RBP17.61■□□□□ 0.41
SEC24D-208ENST00000506622 COG6Q9Y2V7 657 aa17.61■□□□□ 0.41
SEC24D-208ENST00000506622 SLC15A5A6NIM6 579 aa17.6■□□□□ 0.41
SEC24D-208ENST00000506622 CCND3P30281 292 aaPredicted RBP17.6■□□□□ 0.41
SEC24D-208ENST00000506622 GUCY1A2P33402 732 aa17.6■□□□□ 0.41
SEC24D-208ENST00000506622 MFSD14CQ5VZR4 134 aa17.6■□□□□ 0.41
SEC24D-208ENST00000506622 SDR42E1Q8WUS8 393 aa17.6■□□□□ 0.41
SEC24D-208ENST00000506622 DCP1AQ9NPI6 582 aaPredicted RBP17.6■□□□□ 0.41
SEC24D-208ENST00000506622 ZBTB40Q9NUA8 1239 aa17.6■□□□□ 0.41
SEC24D-208ENST00000506622 HOXC10Q9NYD6 342 aa17.6■□□□□ 0.41
SEC24D-208ENST00000506622 LAMA2P24043 3122 aaKnown RBP17.6■□□□□ 0.41
SEC24D-208ENST00000506622 TCRBV5S4A2TA0A5A2 114 aa17.59■□□□□ 0.41
SEC24D-208ENST00000506622 SPDYE16A6NNV3 312 aaPredicted RBP17.59■□□□□ 0.41
SEC24D-208ENST00000506622 PTPREP23469 700 aa17.59■□□□□ 0.41
SEC24D-208ENST00000506622 ATP2B2Q01814 1243 aa17.59■□□□□ 0.41
SEC24D-208ENST00000506622 COG2Q14746 738 aa17.59■□□□□ 0.41
SEC24D-208ENST00000506622 LHX8Q68G74 356 aa17.59■□□□□ 0.41
SEC24D-208ENST00000506622 SIRT2Q8IXJ6 389 aa17.59■□□□□ 0.41
SEC24D-208ENST00000506622 LCORLQ8N3X6 602 aa17.59■□□□□ 0.41
SEC24D-208ENST00000506622 GDF15Q99988 308 aa17.59■□□□□ 0.41
SEC24D-208ENST00000506622 PAG1Q9NWQ8 432 aa17.59■□□□□ 0.41
SEC24D-208ENST00000506622 BTBD7Q9P203 1132 aa17.59■□□□□ 0.41
SEC24D-208ENST00000506622 SWAP70Q9UH65 585 aa17.59■□□□□ 0.41
SEC24D-208ENST00000506622 BMP8BP34820 402 aa17.58■□□□□ 0.4
SEC24D-208ENST00000506622 TMEM179Q6ZVK1 233 aa17.58■□□□□ 0.4
SEC24D-208ENST00000506622 TANGO6Q9C0B7 1094 aa17.58■□□□□ 0.4
SEC24D-208ENST00000506622 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.58■□□□□ 0.44e-7■■■□□ 15.1
SEC24D-208ENST00000506622 BOLA2Q9H3K6 86 aa17.58■□□□□ 0.4
SEC24D-208ENST00000506622 ARMT1Q9H993 441 aa17.58■□□□□ 0.4
SEC24D-208ENST00000506622 BAZ2AQ9UIF9 1905 aaKnown RBP17.57■□□□□ 0.4
SEC24D-208ENST00000506622 A0A1W2PRG0 241 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms