RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 ZNF746Q6NUN9 644 aaPredicted RBP8.14□□□□□ -1.11
UBE2D3-218ENST00000505009 HS2ST1Q7LGA3 356 aa8.14□□□□□ -1.11
UBE2D3-218ENST00000505009 TMEM87AQ8NBN3 555 aa8.14□□□□□ -1.11
UBE2D3-218ENST00000505009 ZNF296Q8WUU4 475 aaPredicted RBP8.14□□□□□ -1.11
UBE2D3-218ENST00000505009 Q96M66 194 aa8.14□□□□□ -1.11
UBE2D3-218ENST00000505009 BACH2Q9BYV9 841 aa8.14□□□□□ -1.11
UBE2D3-218ENST00000505009 KCNQ5Q9NR82 932 aa8.14□□□□□ -1.11
UBE2D3-218ENST00000505009 WASH4PA8MWX3 477 aa8.13□□□□□ -1.11
UBE2D3-218ENST00000505009 GREM1O60565 184 aa8.13□□□□□ -1.11
UBE2D3-218ENST00000505009 CYB5D2Q8WUJ1 264 aa8.13□□□□□ -1.11
UBE2D3-218ENST00000505009 BRMS1Q9HCU9 246 aa8.13□□□□□ -1.11
UBE2D3-218ENST00000505009 UBP1Q9NZI7 540 aa8.13□□□□□ -1.11
UBE2D3-218ENST00000505009 CEP131Q9UPN4 1083 aa8.13□□□□□ -1.11
UBE2D3-218ENST00000505009 RNF114Q9Y508 228 aa8.13□□□□□ -1.11
UBE2D3-218ENST00000505009 SLC23A3Q6PIS1 610 aa8.12□□□□□ -1.11
UBE2D3-218ENST00000505009 BAHD1Q8TBE0 780 aaPredicted RBP8.12□□□□□ -1.11
UBE2D3-218ENST00000505009 CARS2Q9HA77 564 aaKnown RBP8.12□□□□□ -1.11
UBE2D3-218ENST00000505009 SUPT16HQ9Y5B9 1047 aaKnown RBP8.12□□□□□ -1.11
UBE2D3-218ENST00000505009 CYP7A1P22680 504 aa8.11□□□□□ -1.11
UBE2D3-218ENST00000505009 ETV3P41162 512 aa8.11□□□□□ -1.11
UBE2D3-218ENST00000505009 YARSP54577 528 aaKnown RBP8.11□□□□□ -1.11
UBE2D3-218ENST00000505009 SLFN12Q8IYM2 578 aa8.11□□□□□ -1.11
UBE2D3-218ENST00000505009 UBE2FQ969M7 185 aa8.11□□□□□ -1.11
UBE2D3-218ENST00000505009 FMNL2Q96PY5 1086 aa8.11□□□□□ -1.11
UBE2D3-218ENST00000505009 LRRC3Q9BY71 257 aa8.11□□□□□ -1.11
UBE2D3-218ENST00000505009 ZSWIM5Q9P217 1185 aa8.11□□□□□ -1.11
UBE2D3-218ENST00000505009 LRRN2O75325 713 aa8.1□□□□□ -1.11
UBE2D3-218ENST00000505009 KIR3DL1P43629 444 aa8.1□□□□□ -1.11
UBE2D3-218ENST00000505009 CWF19L2Q2TBE0 894 aaKnown RBP8.1□□□□□ -1.11
UBE2D3-218ENST00000505009 PCDHB14Q9Y5E9 798 aa8.1□□□□□ -1.11
UBE2D3-218ENST00000505009 RBM47A0AV96 593 aaKnown RBP8.09□□□□□ -1.11
UBE2D3-218ENST00000505009 SEZ6Q53EL9 994 aa8.09□□□□□ -1.11
UBE2D3-218ENST00000505009 KIF2CQ99661 725 aa8.09□□□□□ -1.11
UBE2D3-218ENST00000505009 KRTAP4-12Q9BQ66 201 aa8.09□□□□□ -1.11
UBE2D3-218ENST00000505009 CARMIL2Q6F5E8 1435 aa8.09□□□□□ -1.11
UBE2D3-218ENST00000505009 JUNBP17275 347 aaPredicted RBP8.08□□□□□ -1.12
UBE2D3-218ENST00000505009 TNNI2P48788 182 aa8.08□□□□□ -1.12
UBE2D3-218ENST00000505009 FANCCQ00597 558 aa8.08□□□□□ -1.12
UBE2D3-218ENST00000505009 ATG4DQ86TL0 474 aaPredicted RBP8.08□□□□□ -1.12
UBE2D3-218ENST00000505009 PHACTR4Q8IZ21 702 aa8.08□□□□□ -1.12
UBE2D3-218ENST00000505009 COX4I2Q96KJ9 171 aa8.08□□□□□ -1.12
UBE2D3-218ENST00000505009 DUSP15Q9H1R2 295 aaPredicted RBP8.08□□□□□ -1.12
UBE2D3-218ENST00000505009 PCDHGB7Q9Y5F8 929 aa8.08□□□□□ -1.12
UBE2D3-218ENST00000505009 ROBO2Q9HCK4 1378 aa8.08□□□□□ -1.12
UBE2D3-218ENST00000505009 SLC22A31A6NKX4 558 aa8.07□□□□□ -1.12
UBE2D3-218ENST00000505009 ZNF76P36508 570 aa8.07□□□□□ -1.12
UBE2D3-218ENST00000505009 CLCQ05315 142 aa8.07□□□□□ -1.12
UBE2D3-218ENST00000505009 APOBRQ0VD83 1088 aa8.07□□□□□ -1.12
UBE2D3-218ENST00000505009 ZNF394Q53GI3 561 aa8.07□□□□□ -1.12
UBE2D3-218ENST00000505009 ARSHQ5FYA8 562 aa8.07□□□□□ -1.12
UBE2D3-218ENST00000505009 THAP5Q7Z6K1 395 aa8.07□□□□□ -1.12
UBE2D3-218ENST00000505009 DTWD2Q8NBA8 298 aa8.07□□□□□ -1.12
UBE2D3-218ENST00000505009 EAF1Q96JC9 268 aaPredicted RBP8.07□□□□□ -1.12
UBE2D3-218ENST00000505009 CCDC74BQ96LY2 380 aa8.07□□□□□ -1.12
UBE2D3-218ENST00000505009 KREMEN1Q96MU8 473 aa8.07□□□□□ -1.12
UBE2D3-218ENST00000505009 LMCD1Q9NZU5 365 aa8.07□□□□□ -1.12
UBE2D3-218ENST00000505009 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.07□□□□□ -1.12
UBE2D3-218ENST00000505009 RECKO95980 971 aa8.06□□□□□ -1.12
UBE2D3-218ENST00000505009 ESR1P03372 595 aa8.06□□□□□ -1.12
UBE2D3-218ENST00000505009 GK5Q6ZS86 529 aa8.06□□□□□ -1.12
UBE2D3-218ENST00000505009 PIWIL2Q8TC59 973 aaKnown RBP8.06□□□□□ -1.12
UBE2D3-218ENST00000505009 ASIC4Q96FT7 647 aa8.06□□□□□ -1.12
UBE2D3-218ENST00000505009 ANTXR1Q9H6X2 564 aa8.06□□□□□ -1.12
UBE2D3-218ENST00000505009 C19orf73Q9NVV2 129 aa8.06□□□□□ -1.12
UBE2D3-218ENST00000505009 CTNND2Q9UQB3 1225 aa8.06□□□□□ -1.12
UBE2D3-218ENST00000505009 ATE1O95260 518 aa8.05□□□□□ -1.12
UBE2D3-218ENST00000505009 POLR2BP30876 1174 aaKnown RBP8.05□□□□□ -1.12
UBE2D3-218ENST00000505009 OVOS1Q6IE37 1185 aa8.05□□□□□ -1.12
UBE2D3-218ENST00000505009 RNF141Q8WVD5 230 aa8.05□□□□□ -1.12
UBE2D3-218ENST00000505009 SPON2Q9BUD6 331 aa8.05□□□□□ -1.12
UBE2D3-218ENST00000505009 BIN1O00499 593 aa8.04□□□□□ -1.12
UBE2D3-218ENST00000505009 UBOX5O94941 541 aa8.04□□□□□ -1.12
UBE2D3-218ENST00000505009 MCM4P33991 863 aa8.04□□□□□ -1.12
UBE2D3-218ENST00000505009 FYB2Q5VWT5 728 aa8.04□□□□□ -1.12
UBE2D3-218ENST00000505009 USP48Q86UV5 1035 aa8.04□□□□□ -1.12
UBE2D3-218ENST00000505009 KRTAP19-1Q8IUB9 90 aa8.04□□□□□ -1.12
UBE2D3-218ENST00000505009 KIAA0825Q8IV33 1275 aa8.04□□□□□ -1.12
UBE2D3-218ENST00000505009 FLAD1Q8NFF5 587 aa8.04□□□□□ -1.12
UBE2D3-218ENST00000505009 FAM168AQ92567 244 aa8.04□□□□□ -1.12
UBE2D3-218ENST00000505009 EHMT1Q9H9B1 1298 aa8.04□□□□□ -1.12
UBE2D3-218ENST00000505009 SHISA3A0PJX4 238 aa8.03□□□□□ -1.12
UBE2D3-218ENST00000505009 RGS13O14921 159 aa8.03□□□□□ -1.12
UBE2D3-218ENST00000505009 SRFP11831 508 aa8.03□□□□□ -1.12
UBE2D3-218ENST00000505009 TPP2P29144 1249 aaPredicted RBP8.03□□□□□ -1.12
UBE2D3-218ENST00000505009 GBP1P32455 592 aa8.03□□□□□ -1.12
UBE2D3-218ENST00000505009 GAB4Q2WGN9 574 aa8.03□□□□□ -1.12
UBE2D3-218ENST00000505009 OGFOD2Q6N063 350 aa8.03□□□□□ -1.12
UBE2D3-218ENST00000505009 CREG2Q8IUH2 290 aa8.03□□□□□ -1.12
UBE2D3-218ENST00000505009 NKD1Q969G9 470 aa8.03□□□□□ -1.12
UBE2D3-218ENST00000505009 VWCEQ96DN2 955 aa8.03□□□□□ -1.12
UBE2D3-218ENST00000505009 NT5C1AQ9BXI3 368 aa8.03□□□□□ -1.12
UBE2D3-218ENST00000505009 SLAMF8Q9P0V8 285 aa8.03□□□□□ -1.12
UBE2D3-218ENST00000505009 GMIPQ9P107 970 aa8.03□□□□□ -1.12
UBE2D3-218ENST00000505009 RAG1P15918 1043 aa8.02□□□□□ -1.13
UBE2D3-218ENST00000505009 TXKP42681 527 aa8.02□□□□□ -1.13
UBE2D3-218ENST00000505009 RACK1P63244 317 aaKnown RBP8.02□□□□□ -1.13
UBE2D3-218ENST00000505009 RALGPS1Q5JS13 557 aa8.02□□□□□ -1.13
UBE2D3-218ENST00000505009 SLITRK4Q8IW52 837 aa8.02□□□□□ -1.13
UBE2D3-218ENST00000505009 ATG4CQ96DT6 458 aa8.02□□□□□ -1.13
UBE2D3-218ENST00000505009 GPR62Q9BZJ7 368 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms