RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 MAP3K9P80192 1104 aa5.87□□□□□ -1.47
LMNB1-208ENST00000504788 HTRA3P83110 453 aa5.87□□□□□ -1.47
LMNB1-208ENST00000504788 DCAF15Q66K64 600 aa5.87□□□□□ -1.47
LMNB1-208ENST00000504788 ZSCAN29Q8IWY8 852 aaPredicted RBP5.87□□□□□ -1.47
LMNB1-208ENST00000504788 ANKRD13AQ8IZ07 590 aa5.87□□□□□ -1.47
LMNB1-208ENST00000504788 SCYL3Q8IZE3 742 aa5.87□□□□□ -1.47
LMNB1-208ENST00000504788 DNAJC5GQ8N7S2 189 aa5.87□□□□□ -1.47
LMNB1-208ENST00000504788 IGDCC4Q8TDY8 1250 aa5.87□□□□□ -1.47
LMNB1-208ENST00000504788 ANKS1AQ92625 1134 aa5.87□□□□□ -1.47
LMNB1-208ENST00000504788 ZIC5Q96T25 663 aa5.87□□□□□ -1.47
LMNB1-208ENST00000504788 SENP2Q9HC62 589 aa5.87□□□□□ -1.47
LMNB1-208ENST00000504788 ANGEL1Q9UNK9 670 aaKnown RBP5.87□□□□□ -1.47
LMNB1-208ENST00000504788 KCNH4Q9UQ05 1017 aa5.87□□□□□ -1.47
LMNB1-208ENST00000504788 AFG3L2Q9Y4W6 797 aa5.87□□□□□ -1.47
LMNB1-208ENST00000504788 COL11A1P12107 1806 aaPredicted RBP5.87□□□□□ -1.47
LMNB1-208ENST00000504788 TESPA1A2RU30 521 aaPredicted RBP5.86□□□□□ -1.47
LMNB1-208ENST00000504788 B4E1Z4 1266 aa5.86□□□□□ -1.47
LMNB1-208ENST00000504788 IRF6O14896 467 aa5.86□□□□□ -1.47
LMNB1-208ENST00000504788 GH2P01242 217 aa5.86□□□□□ -1.47
LMNB1-208ENST00000504788 NT5C2P49902 561 aa5.86□□□□□ -1.47
LMNB1-208ENST00000504788 EVCP57679 992 aa5.86□□□□□ -1.47
LMNB1-208ENST00000504788 ANAPC15P60006 121 aa5.86□□□□□ -1.47
LMNB1-208ENST00000504788 DGKZQ13574 1117 aa5.86□□□□□ -1.47
LMNB1-208ENST00000504788 PRKG1Q13976 671 aa5.86□□□□□ -1.47
LMNB1-208ENST00000504788 SEPT2Q15019 361 aa5.86□□□□□ -1.47
LMNB1-208ENST00000504788 IMMTQ16891 758 aaKnown RBP5.86□□□□□ -1.47
LMNB1-208ENST00000504788 CERKLQ49MI3 558 aaPredicted RBP5.86□□□□□ -1.47
LMNB1-208ENST00000504788 FAM47AQ5JRC9 791 aa5.86□□□□□ -1.47
LMNB1-208ENST00000504788 RASAL3Q86YV0 1011 aa5.86□□□□□ -1.47
LMNB1-208ENST00000504788 MKL1Q969V6 931 aa5.86□□□□□ -1.47
LMNB1-208ENST00000504788 HOOK2Q96ED9 719 aa5.86□□□□□ -1.47
LMNB1-208ENST00000504788 CEP95Q96GE4 821 aa5.86□□□□□ -1.47
LMNB1-208ENST00000504788 CCDC17Q96LX7 622 aa5.86□□□□□ -1.47
LMNB1-208ENST00000504788 TTC14Q96N46 770 aa5.86□□□□□ -1.47
LMNB1-208ENST00000504788 TBC1D32Q96NH3 1257 aa5.86□□□□□ -1.47
LMNB1-208ENST00000504788 WDR18Q9BV38 432 aa5.86□□□□□ -1.47
LMNB1-208ENST00000504788 TM6SF1Q9BZW5 370 aa5.86□□□□□ -1.47
LMNB1-208ENST00000504788 ZSWIM6Q9HCJ5 1215 aa5.86□□□□□ -1.47
LMNB1-208ENST00000504788 GPHNQ9NQX3 736 aaPredicted RBP5.86□□□□□ -1.47
LMNB1-208ENST00000504788 GINM1Q9NU53 330 aa5.86□□□□□ -1.47
LMNB1-208ENST00000504788 MTMR4Q9NYA4 1195 aa5.86□□□□□ -1.47
LMNB1-208ENST00000504788 CTNNA3Q9UI47 895 aa5.86□□□□□ -1.47
LMNB1-208ENST00000504788 KDM4AO75164 1064 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 ASNSP08243 561 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 SLC10A3P09131 477 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 SNHG28P0DPA3 235 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 CPA1P15085 419 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 HSPA6P17066 643 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 ECE1P42892 770 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 TFAP4Q01664 338 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 SH3D19Q5HYK7 790 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 SPRYD7Q5W111 196 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 CASC1Q6TDU7 716 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 MFSD6Q6ZSS7 791 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 TMEM179Q6ZVK1 233 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 RASGRP2Q7LDG7 609 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 STK11IPQ8N1F8 1099 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 ENAHQ8N8S7 591 aaPredicted RBP5.85□□□□□ -1.47
LMNB1-208ENST00000504788 ACER1Q8TDN7 264 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 PTPN18Q99952 460 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 MTA3Q9BTC8 594 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 TMX2Q9Y320 296 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 WDR19Q8NEZ3 1342 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 A0A0G2JLL6 359 aaPredicted RBP5.85□□□□□ -1.47
LMNB1-208ENST00000504788 ZBTB48P10074 688 aaPredicted RBP5.85□□□□□ -1.47
LMNB1-208ENST00000504788 IREB2P48200 963 aaKnown RBP5.85□□□□□ -1.47
LMNB1-208ENST00000504788 HUNKP57058 714 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 PPATQ06203 517 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 PDE4BQ07343 736 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 TROAPQ12815 778 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 PPIL2Q13356 520 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 TOB2Q14106 344 aaPredicted RBP5.85□□□□□ -1.47
LMNB1-208ENST00000504788 ABCB5Q2M3G0 1257 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 SLC35G1Q2M3R5 365 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 GPAT2Q6NUI2 795 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 RGMBQ6NW40 437 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 KIAA1211Q6ZU35 1233 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 CHST3Q7LGC8 479 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 PRRT2Q7Z6L0 340 aaPredicted RBP5.85□□□□□ -1.47
LMNB1-208ENST00000504788 SGMS1Q86VZ5 419 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 ERO1BQ86YB8 467 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 CRACR2BQ8N4Y2 399 aaPredicted RBP5.85□□□□□ -1.47
LMNB1-208ENST00000504788 C2orf69Q8N8R5 385 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 OPTNQ96CV9 577 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 DDRGK1Q96HY6 314 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 WNK4Q96J92 1243 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 C12orf42Q96LP6 360 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 KIAA1683Q9H0B3 1180 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 ALDH8A1Q9H2A2 487 aaPredicted RBP5.85□□□□□ -1.47
LMNB1-208ENST00000504788 ZNF408Q9H9D4 720 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 ELP3Q9H9T3 547 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 EMILIN3Q9NT22 766 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 NYAP2Q9P242 653 aa5.85□□□□□ -1.47
LMNB1-208ENST00000504788 NID2Q14112 1375 aa5.84□□□□□ -1.47
LMNB1-208ENST00000504788 SH2B2O14492 632 aaPredicted RBP5.84□□□□□ -1.47
LMNB1-208ENST00000504788 CD2BP2O95400 341 aaKnown RBP5.84□□□□□ -1.47
LMNB1-208ENST00000504788 EEF2P13639 858 aaKnown RBP5.84□□□□□ -1.47
LMNB1-208ENST00000504788 NF2P35240 595 aa5.84□□□□□ -1.47
LMNB1-208ENST00000504788 BACE1P56817 501 aa5.84□□□□□ -1.47
LMNB1-208ENST00000504788 ST3GAL1Q11201 340 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms