RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 USP17L21D6R901 530 aa16.44■□□□□ 0.22
HOXC6-203ENST00000504315 IRX3P78415 501 aaPredicted RBP16.44■□□□□ 0.22
HOXC6-203ENST00000504315 IRF5Q13568 498 aa16.44■□□□□ 0.22
HOXC6-203ENST00000504315 GIMAP6Q6P9H5 292 aa16.44■□□□□ 0.22
HOXC6-203ENST00000504315 TMEM179Q6ZVK1 233 aa16.44■□□□□ 0.22
HOXC6-203ENST00000504315 C16orf86Q6ZW13 317 aa16.44■□□□□ 0.22
HOXC6-203ENST00000504315 RAET1EQ8TD07 263 aa16.44■□□□□ 0.22
HOXC6-203ENST00000504315 ACER1Q8TDN7 264 aa16.44■□□□□ 0.22
HOXC6-203ENST00000504315 SH3TC2Q8TF17 1288 aa16.44■□□□□ 0.22
HOXC6-203ENST00000504315 GTF3C2Q8WUA4 911 aaPredicted RBP16.44■□□□□ 0.22
HOXC6-203ENST00000504315 DYNLL2Q96FJ2 89 aa16.44■□□□□ 0.22
HOXC6-203ENST00000504315 DDRGK1Q96HY6 314 aa16.44■□□□□ 0.22
HOXC6-203ENST00000504315 P2RX7Q99572 595 aaKnown RBP16.44■□□□□ 0.22
HOXC6-203ENST00000504315 ARPP21Q9UBL0 812 aaPredicted RBP16.44■□□□□ 0.22
HOXC6-203ENST00000504315 GABRQQ9UN88 632 aa16.44■□□□□ 0.22
HOXC6-203ENST00000504315 ROBO3Q96MS0 1386 aa16.43■□□□□ 0.22
HOXC6-203ENST00000504315 GSG1L2A8MUP6 293 aa16.43■□□□□ 0.22
HOXC6-203ENST00000504315 SMIM22K7EJ46 135 aa16.43■□□□□ 0.22
HOXC6-203ENST00000504315 TNPO2O14787 897 aaKnown RBP16.43■□□□□ 0.22
HOXC6-203ENST00000504315 ECM2O94769 699 aaPredicted RBP16.43■□□□□ 0.22
HOXC6-203ENST00000504315 GRK4P32298 578 aa16.43■□□□□ 0.22
HOXC6-203ENST00000504315 HERVK_113P62684 666 aa16.43■□□□□ 0.22
HOXC6-203ENST00000504315 SEPT2Q15019 361 aa16.43■□□□□ 0.22
HOXC6-203ENST00000504315 LRRFIP1Q32MZ4 808 aaKnown RBP16.43■□□□□ 0.22
HOXC6-203ENST00000504315 SBK1Q52WX2 424 aa16.43■□□□□ 0.22
HOXC6-203ENST00000504315 CTR9Q6PD62 1173 aa16.43■□□□□ 0.22
HOXC6-203ENST00000504315 SMC5Q8IY18 1101 aa16.43■□□□□ 0.22
HOXC6-203ENST00000504315 SLAIN1Q8ND83 568 aa16.43■□□□□ 0.22
HOXC6-203ENST00000504315 CCDC17Q96LX7 622 aa16.43■□□□□ 0.22
HOXC6-203ENST00000504315 FEZ1Q99689 392 aa16.43■□□□□ 0.22
HOXC6-203ENST00000504315 STAP2Q9UGK3 403 aa16.43■□□□□ 0.22
HOXC6-203ENST00000504315 CYP2D7A0A087X1C5 515 aa16.42■□□□□ 0.22
HOXC6-203ENST00000504315 GPAA1O43292 621 aa16.42■□□□□ 0.22
HOXC6-203ENST00000504315 VCAM1P19320 739 aa16.42■□□□□ 0.22
HOXC6-203ENST00000504315 CDK8P49336 464 aa16.42■□□□□ 0.22
HOXC6-203ENST00000504315 FLT3LGP49771 235 aa16.42■□□□□ 0.22
HOXC6-203ENST00000504315 ANKRD45Q5TZF3 282 aa16.42■□□□□ 0.22
HOXC6-203ENST00000504315 POTEEQ6S8J3 1075 aa16.42■□□□□ 0.22
HOXC6-203ENST00000504315 AMOTL1Q8IY63 956 aa16.42■□□□□ 0.22
HOXC6-203ENST00000504315 PXYLP1Q8TE99 480 aa16.42■□□□□ 0.22
HOXC6-203ENST00000504315 TXNRD2Q9NNW7 524 aa16.42■□□□□ 0.22
HOXC6-203ENST00000504315 A0A1W2PRG0 241 aa16.41■□□□□ 0.22
HOXC6-203ENST00000504315 USP17L15C9J2P7 530 aa16.41■□□□□ 0.22
HOXC6-203ENST00000504315 USP17L13C9JLJ4 530 aa16.41■□□□□ 0.22
HOXC6-203ENST00000504315 USP17L11C9JVI0 530 aa16.41■□□□□ 0.22
HOXC6-203ENST00000504315 USP17L18D6R9N7 530 aa16.41■□□□□ 0.22
HOXC6-203ENST00000504315 USP17L22D6RA61 530 aa16.41■□□□□ 0.22
HOXC6-203ENST00000504315 USP17L17D6RBQ6 530 aa16.41■□□□□ 0.22
HOXC6-203ENST00000504315 USP17L19D6RCP7 530 aa16.41■□□□□ 0.22
HOXC6-203ENST00000504315 USP17L20D6RJB6 530 aa16.41■□□□□ 0.22
HOXC6-203ENST00000504315 M0R2C6 588 aa16.41■□□□□ 0.22
HOXC6-203ENST00000504315 AKR1B1P15121 316 aa16.41■□□□□ 0.22
HOXC6-203ENST00000504315 GNAT2P19087 354 aa16.41■□□□□ 0.22
HOXC6-203ENST00000504315 USP17L24Q0WX57 530 aa16.41■□□□□ 0.22
HOXC6-203ENST00000504315 LBX2Q6XYB7 198 aa16.41■□□□□ 0.22
HOXC6-203ENST00000504315 CATSPERGQ6ZRH7 1159 aa16.41■□□□□ 0.22
HOXC6-203ENST00000504315 COA7Q96BR5 231 aa16.41■□□□□ 0.22
HOXC6-203ENST00000504315 TMEM106CQ9BVX2 250 aa16.41■□□□□ 0.22
HOXC6-203ENST00000504315 EPB41L4AQ9HCS5 686 aaPredicted RBP16.41■□□□□ 0.22
HOXC6-203ENST00000504315 FRMPD3Q5JV73 1810 aa16.4■□□□□ 0.22
HOXC6-203ENST00000504315 ZNF236Q9UL36 1845 aa16.4■□□□□ 0.22
HOXC6-203ENST00000504315 EN2P19622 333 aaPredicted RBP16.4■□□□□ 0.22
HOXC6-203ENST00000504315 PDE1AP54750 535 aa16.4■□□□□ 0.22
HOXC6-203ENST00000504315 ZYXQ15942 572 aaKnown RBP16.4■□□□□ 0.22
HOXC6-203ENST00000504315 ZMYM1Q5SVZ6 1142 aa16.4■□□□□ 0.22
HOXC6-203ENST00000504315 SIAH1Q8IUQ4 282 aa16.4■□□□□ 0.22
HOXC6-203ENST00000504315 GPRC5AQ8NFJ5 357 aa16.4■□□□□ 0.22
HOXC6-203ENST00000504315 RBPJLQ9UBG7 517 aa16.4■□□□□ 0.22
HOXC6-203ENST00000504315 ZBTB47Q9UFB7 747 aaPredicted RBP16.4■□□□□ 0.22
HOXC6-203ENST00000504315 GJD2Q9UKL4 321 aa16.4■□□□□ 0.22
HOXC6-203ENST00000504315 MPHOSPH10O00566 681 aaKnown RBP16.39■□□□□ 0.21
HOXC6-203ENST00000504315 ERVK-9P63128 1117 aa16.39■□□□□ 0.21
HOXC6-203ENST00000504315 ERVK-24P63145 666 aa16.39■□□□□ 0.21
HOXC6-203ENST00000504315 MTFR1Q15390 333 aa16.39■□□□□ 0.21
HOXC6-203ENST00000504315 TICAM2Q86XR7 235 aa16.39■□□□□ 0.21
HOXC6-203ENST00000504315 EXOC6Q8TAG9 804 aa16.39■□□□□ 0.21
HOXC6-203ENST00000504315 FSD1Q9BTV5 496 aa16.39■□□□□ 0.21
HOXC6-203ENST00000504315 RWDD1Q9H446 243 aaPredicted RBP16.39■□□□□ 0.21
HOXC6-203ENST00000504315 RABGAP1Q9Y3P9 1069 aa16.39■□□□□ 0.21
HOXC6-203ENST00000504315 CEP290O15078 2479 aa16.38■□□□□ 0.21
HOXC6-203ENST00000504315 PATL2C9JE40 543 aaKnown RBP16.38■□□□□ 0.21
HOXC6-203ENST00000504315 ADCY3O60266 1144 aa16.38■□□□□ 0.21
HOXC6-203ENST00000504315 CNMDO75829 334 aa16.38■□□□□ 0.21
HOXC6-203ENST00000504315 ICA1Q05084 483 aa16.38■□□□□ 0.21
HOXC6-203ENST00000504315 Q3C1V9 767 aa16.38■□□□□ 0.21
HOXC6-203ENST00000504315 LPAR1Q92633 364 aa16.38■□□□□ 0.21
HOXC6-203ENST00000504315 SEC62Q99442 399 aaKnown RBP16.38■□□□□ 0.21
HOXC6-203ENST00000504315 RPAP3Q9H6T3 665 aaPredicted RBP16.38■□□□□ 0.21
HOXC6-203ENST00000504315 TMX2Q9Y320 296 aa16.38■□□□□ 0.21
HOXC6-203ENST00000504315 PLXNA1Q9UIW2 1896 aa16.37■□□□□ 0.21
HOXC6-203ENST00000504315 SPDYE16A6NNV3 312 aaPredicted RBP16.37■□□□□ 0.21
HOXC6-203ENST00000504315 PEX10O60683 326 aa16.37■□□□□ 0.21
HOXC6-203ENST00000504315 IGHDP01880 384 aa16.37■□□□□ 0.21
HOXC6-203ENST00000504315 UBXN2AP68543 259 aa16.37■□□□□ 0.21
HOXC6-203ENST00000504315 EVI5LQ96CN4 794 aa16.37■□□□□ 0.21
HOXC6-203ENST00000504315 KANSL2Q9H9L4 492 aa16.37■□□□□ 0.21
HOXC6-203ENST00000504315 ARHGEF10LQ9HCE6 1279 aa16.37■□□□□ 0.21
HOXC6-203ENST00000504315 ALPK3Q96L96 1907 aa16.37■□□□□ 0.21
HOXC6-203ENST00000504315 LAMA4Q16363 1823 aa16.36■□□□□ 0.21
HOXC6-203ENST00000504315 ELNP15502 786 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms