RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 NTF4P34130 210 aa4.48□□□□□ -1.69
HMGB3P17-201ENST00000504195 KIR3DL1P43629 444 aa4.48□□□□□ -1.69
HMGB3P17-201ENST00000504195 ADAM17P78536 824 aa4.48□□□□□ -1.69
HMGB3P17-201ENST00000504195 RING1Q06587 406 aa4.48□□□□□ -1.69
HMGB3P17-201ENST00000504195 USPL1Q5W0Q7 1092 aa4.48□□□□□ -1.69
HMGB3P17-201ENST00000504195 MAP1SQ66K74 1059 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P17-201ENST00000504195 UBE3DQ7Z6J8 389 aa4.48□□□□□ -1.69
HMGB3P17-201ENST00000504195 LINC01356Q8N9X3 169 aa4.48□□□□□ -1.69
HMGB3P17-201ENST00000504195 MFSD2AQ8NA29 543 aa4.48□□□□□ -1.69
HMGB3P17-201ENST00000504195 GPBAR1Q8TDU6 330 aa4.48□□□□□ -1.69
HMGB3P17-201ENST00000504195 DHX38Q92620 1227 aaKnown RBP4.48□□□□□ -1.69
HMGB3P17-201ENST00000504195 MIPEPQ99797 713 aa4.48□□□□□ -1.69
HMGB3P17-201ENST00000504195 BRPF3Q9ULD4 1205 aa4.48□□□□□ -1.69
HMGB3P17-201ENST00000504195 SAMM50Q9Y512 469 aa4.48□□□□□ -1.69
HMGB3P17-201ENST00000504195 CYR61O00622 381 aa4.47□□□□□ -1.69
HMGB3P17-201ENST00000504195 N4BP3O15049 544 aa4.47□□□□□ -1.69
HMGB3P17-201ENST00000504195 EPHB3P54753 998 aa4.47□□□□□ -1.69
HMGB3P17-201ENST00000504195 ZNF252P-AS1Q0IIN9 211 aa4.47□□□□□ -1.69
HMGB3P17-201ENST00000504195 SNX17Q15036 470 aa4.47□□□□□ -1.69
HMGB3P17-201ENST00000504195 NR0B2Q15466 257 aa4.47□□□□□ -1.69
HMGB3P17-201ENST00000504195 TIGD5Q53EQ6 642 aa4.47□□□□□ -1.69
HMGB3P17-201ENST00000504195 ADGRF1Q5T601 910 aa4.47□□□□□ -1.69
HMGB3P17-201ENST00000504195 ZBTB37Q5TC79 503 aa4.47□□□□□ -1.69
HMGB3P17-201ENST00000504195 CCDC74AQ96AQ1 378 aa4.47□□□□□ -1.69
HMGB3P17-201ENST00000504195 CITED4Q96RK1 184 aa4.47□□□□□ -1.69
HMGB3P17-201ENST00000504195 SMPD4Q9NXE4 827 aa4.47□□□□□ -1.69
HMGB3P17-201ENST00000504195 TRIM37O94972 964 aa4.46□□□□□ -1.7
HMGB3P17-201ENST00000504195 ZGLP1P0C6A0 271 aa4.46□□□□□ -1.7
HMGB3P17-201ENST00000504195 CAP2P40123 477 aa4.46□□□□□ -1.7
HMGB3P17-201ENST00000504195 KCNC1P48547 511 aa4.46□□□□□ -1.7
HMGB3P17-201ENST00000504195 SPPL2CQ8IUH8 684 aa4.46□□□□□ -1.7
HMGB3P17-201ENST00000504195 PIWIL2Q8TC59 973 aaKnown RBP4.46□□□□□ -1.7
HMGB3P17-201ENST00000504195 SP110Q9HB58 689 aa4.46□□□□□ -1.7
HMGB3P17-201ENST00000504195 USP40Q9NVE5 1235 aa4.46□□□□□ -1.7
HMGB3P17-201ENST00000504195 CHRNEQ04844 493 aa4.45□□□□□ -1.7
HMGB3P17-201ENST00000504195 GRM2Q14416 872 aa4.45□□□□□ -1.7
HMGB3P17-201ENST00000504195 ZFYVE27Q5T4F4 411 aa4.45□□□□□ -1.7
HMGB3P17-201ENST00000504195 OLFML2BQ68BL8 750 aa4.45□□□□□ -1.7
HMGB3P17-201ENST00000504195 USP51Q70EK9 711 aa4.45□□□□□ -1.7
HMGB3P17-201ENST00000504195 ZFPM1Q8IX07 1006 aa4.45□□□□□ -1.7
HMGB3P17-201ENST00000504195 CBX8Q9HC52 389 aa4.45□□□□□ -1.7
HMGB3P17-201ENST00000504195 DCDC2CA8MYV0 355 aa4.44□□□□□ -1.7
HMGB3P17-201ENST00000504195 HRKO00198 91 aa4.44□□□□□ -1.7
HMGB3P17-201ENST00000504195 NDUFB5O43674 189 aa4.44□□□□□ -1.7
HMGB3P17-201ENST00000504195 SLPIP03973 132 aa4.44□□□□□ -1.7
HMGB3P17-201ENST00000504195 TACR2P21452 398 aa4.44□□□□□ -1.7
HMGB3P17-201ENST00000504195 FCGRTP55899 365 aa4.44□□□□□ -1.7
HMGB3P17-201ENST00000504195 EGR3Q06889 387 aa4.44□□□□□ -1.7
HMGB3P17-201ENST00000504195 TNK2Q07912 1038 aa4.44□□□□□ -1.7
HMGB3P17-201ENST00000504195 C12orf40Q86WS4 652 aa4.44□□□□□ -1.7
HMGB3P17-201ENST00000504195 TRIT1Q9H3H1 467 aaKnown RBP4.44□□□□□ -1.7
HMGB3P17-201ENST00000504195 EPB41L4AQ9HCS5 686 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P17-201ENST00000504195 EGFL7Q9UHF1 273 aa4.44□□□□□ -1.7
HMGB3P17-201ENST00000504195 DUSP13Q9UII6 198 aa4.44□□□□□ -1.7
HMGB3P17-201ENST00000504195 IRS4O14654 1257 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P17-201ENST00000504195 ABL1P00519 1130 aa4.43□□□□□ -1.7
HMGB3P17-201ENST00000504195 TPP2P29144 1249 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P17-201ENST00000504195 ORC1Q13415 861 aa4.43□□□□□ -1.7
HMGB3P17-201ENST00000504195 LRRC14Q15048 493 aa4.43□□□□□ -1.7
HMGB3P17-201ENST00000504195 CPZQ66K79 652 aa4.43□□□□□ -1.7
HMGB3P17-201ENST00000504195 FAM129CQ86XR2 697 aa4.43□□□□□ -1.7
HMGB3P17-201ENST00000504195 STK35Q8TDR2 534 aa4.43□□□□□ -1.7
HMGB3P17-201ENST00000504195 ELMO3Q96BJ8 720 aa4.43□□□□□ -1.7
HMGB3P17-201ENST00000504195 PWWP2AQ96N64 755 aa4.43□□□□□ -1.7
HMGB3P17-201ENST00000504195 FAM129BQ96TA1 746 aa4.43□□□□□ -1.7
HMGB3P17-201ENST00000504195 NLRP2Q9NX02 1062 aa4.43□□□□□ -1.7
HMGB3P17-201ENST00000504195 C1QTNF3-AMACRE9PGA6 284 aa4.42□□□□□ -1.7
HMGB3P17-201ENST00000504195 EIF1AYO14602 144 aaKnown RBP4.42□□□□□ -1.7
HMGB3P17-201ENST00000504195 LTKP29376 864 aa4.42□□□□□ -1.7
HMGB3P17-201ENST00000504195 DUSP4Q13115 394 aa4.42□□□□□ -1.7
HMGB3P17-201ENST00000504195 LETMD1Q6P1Q0 360 aa4.42□□□□□ -1.7
HMGB3P17-201ENST00000504195 ANKS4BQ8N8V4 417 aa4.42□□□□□ -1.7
HMGB3P17-201ENST00000504195 VWCEQ96DN2 955 aa4.42□□□□□ -1.7
HMGB3P17-201ENST00000504195 NECAB3Q96P71 396 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P17-201ENST00000504195 GALK1P51570 392 aa4.41□□□□□ -1.7
HMGB3P17-201ENST00000504195 FERMT3Q86UX7 667 aa4.41□□□□□ -1.7
HMGB3P17-201ENST00000504195 SIRT2Q8IXJ6 389 aa4.41□□□□□ -1.7
HMGB3P17-201ENST00000504195 MZB1Q8WU39 189 aa4.41□□□□□ -1.7
HMGB3P17-201ENST00000504195 CEP44Q9C0F1 390 aa4.41□□□□□ -1.7
HMGB3P17-201ENST00000504195 CNTD2Q9H8S5 307 aa4.41□□□□□ -1.7
HMGB3P17-201ENST00000504195 PCDHA4Q9UN74 947 aa4.41□□□□□ -1.7
HMGB3P17-201ENST00000504195 ICMTO60725 284 aa4.4□□□□□ -1.71
HMGB3P17-201ENST00000504195 VIPR1P32241 457 aa4.4□□□□□ -1.71
HMGB3P17-201ENST00000504195 SLBPQ14493 270 aaKnown RBP eCLIP4.4□□□□□ -1.71
HMGB3P17-201ENST00000504195 TMEFF1Q8IYR6 380 aa4.4□□□□□ -1.71
HMGB3P17-201ENST00000504195 WNT10AQ9GZT5 417 aa4.4□□□□□ -1.71
HMGB3P17-201ENST00000504195 GPATCH2Q9NW75 528 aa4.4□□□□□ -1.71
HMGB3P17-201ENST00000504195 AKAP2Q9Y2D5 859 aa4.4□□□□□ -1.71
HMGB3P17-201ENST00000504195 BMP6P22004 513 aa4.39□□□□□ -1.71
HMGB3P17-201ENST00000504195 TGM1P22735 817 aa4.39□□□□□ -1.71
HMGB3P17-201ENST00000504195 SLURP1P55000 103 aa4.39□□□□□ -1.71
HMGB3P17-201ENST00000504195 ZNF211Q13398 564 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P17-201ENST00000504195 LLGL2Q6P1M3 1020 aa4.39□□□□□ -1.71
HMGB3P17-201ENST00000504195 HDXQ7Z353 690 aa4.39□□□□□ -1.71
HMGB3P17-201ENST00000504195 HID1Q8IV36 788 aa4.39□□□□□ -1.71
HMGB3P17-201ENST00000504195 CCDC97Q96F63 343 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P17-201ENST00000504195 SERPINA10Q9UK55 444 aa4.39□□□□□ -1.71
HMGB3P17-201ENST00000504195 CYP8B1Q9UNU6 501 aa4.39□□□□□ -1.71
HMGB3P17-201ENST00000504195 PRAMEF27A3QJZ7 478 aa4.38□□□□□ -1.71
HMGB3P17-201ENST00000504195 TMEM88BA6NKF7 163 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms