RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 GSDMAQ96QA5 445 aa8.42□□□□□ -1.06
PDGFC-203ENST00000502773 SWAP70Q9UH65 585 aa8.42□□□□□ -1.06
PDGFC-203ENST00000502773 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.42□□□□□ -1.06
PDGFC-203ENST00000502773 SLC26A4O43511 780 aa8.42□□□□□ -1.06
PDGFC-203ENST00000502773 LONP1P36776 959 aaKnown RBP8.42□□□□□ -1.06
PDGFC-203ENST00000502773 GYG1P46976 350 aa8.42□□□□□ -1.06
PDGFC-203ENST00000502773 SETQ01105 290 aaPredicted RBP8.42□□□□□ -1.06
PDGFC-203ENST00000502773 TMEM266Q2M3C6 531 aa8.42□□□□□ -1.06
PDGFC-203ENST00000502773 MAGEC2Q9UBF1 373 aaPredicted RBP8.42□□□□□ -1.06
PDGFC-203ENST00000502773 USP17L12C9JPN9 530 aa8.41□□□□□ -1.06
PDGFC-203ENST00000502773 USP17L21D6R901 530 aa8.41□□□□□ -1.06
PDGFC-203ENST00000502773 SCG2P13521 617 aa8.41□□□□□ -1.06
PDGFC-203ENST00000502773 PDE6BP35913 854 aa8.41□□□□□ -1.06
PDGFC-203ENST00000502773 PI16Q6UXB8 463 aa8.41□□□□□ -1.06
PDGFC-203ENST00000502773 AOPEPQ8N6M6 819 aa8.41□□□□□ -1.06
PDGFC-203ENST00000502773 ANKS1AQ92625 1134 aa8.41□□□□□ -1.06
PDGFC-203ENST00000502773 RRP36Q96EU6 259 aaKnown RBP8.41□□□□□ -1.06
PDGFC-203ENST00000502773 GJD4Q96KN9 370 aaPredicted RBP8.41□□□□□ -1.06
PDGFC-203ENST00000502773 AK8Q96MA6 479 aa8.41□□□□□ -1.06
PDGFC-203ENST00000502773 NAA15Q9BXJ9 866 aaKnown RBP8.41□□□□□ -1.06
PDGFC-203ENST00000502773 NEDD4P46934 1319 aa8.41□□□□□ -1.06
PDGFC-203ENST00000502773 UBASH3AP57075 661 aa8.41□□□□□ -1.06
PDGFC-203ENST00000502773 CFAP100Q494V2 611 aa8.41□□□□□ -1.06
PDGFC-203ENST00000502773 LINC00116Q8NCU8 138 aa8.41□□□□□ -1.06
PDGFC-203ENST00000502773 KIAA1524Q8TCG1 905 aa8.41□□□□□ -1.06
PDGFC-203ENST00000502773 ARGLU1Q9NWB6 273 aaPredicted RBP8.41□□□□□ -1.06
PDGFC-203ENST00000502773 CLIC4Q9Y696 253 aa8.41□□□□□ -1.06
PDGFC-203ENST00000502773 PSDA5PKW4 1024 aaPredicted RBP8.41□□□□□ -1.06
PDGFC-203ENST00000502773 IPO7O95373 1038 aaKnown RBP8.41□□□□□ -1.06
PDGFC-203ENST00000502773 NDUFA8P51970 172 aa8.41□□□□□ -1.06
PDGFC-203ENST00000502773 DMTNQ08495 405 aa8.41□□□□□ -1.06
PDGFC-203ENST00000502773 POSTNQ15063 836 aa8.41□□□□□ -1.06
PDGFC-203ENST00000502773 CC2D2BQ6DHV5 1058 aa8.41□□□□□ -1.06
PDGFC-203ENST00000502773 SYNE4Q8N205 404 aa8.41□□□□□ -1.06
PDGFC-203ENST00000502773 SUPT20HQ8NEM7 779 aa8.41□□□□□ -1.06
PDGFC-203ENST00000502773 MYRIPQ8NFW9 859 aa8.41□□□□□ -1.06
PDGFC-203ENST00000502773 NSUN4Q96CB9 384 aaKnown RBP8.41□□□□□ -1.06
PDGFC-203ENST00000502773 CCDC51Q96ER9 411 aa8.41□□□□□ -1.06
PDGFC-203ENST00000502773 TUBE1Q9UJT0 475 aa8.41□□□□□ -1.06
PDGFC-203ENST00000502773 TTC38Q5R3I4 469 aa8.4□□□□□ -1.06
PDGFC-203ENST00000502773 TBC1D9BQ66K14 1250 aa8.4□□□□□ -1.06
PDGFC-203ENST00000502773 TMTC3Q6ZXV5 915 aa8.4□□□□□ -1.06
PDGFC-203ENST00000502773 ZNF592Q92610 1267 aa8.4□□□□□ -1.06
PDGFC-203ENST00000502773 ZC3H12CQ9C0D7 883 aaKnown RBP8.4□□□□□ -1.06
PDGFC-203ENST00000502773 BMP2KQ9NSY1 1161 aaPredicted RBP8.4□□□□□ -1.06
PDGFC-203ENST00000502773 LRP5O75197 1615 aa8.4□□□□□ -1.06
PDGFC-203ENST00000502773 MARCH6O60337 910 aa8.4□□□□□ -1.06
PDGFC-203ENST00000502773 SKILP12757 684 aa8.4□□□□□ -1.06
PDGFC-203ENST00000502773 MECOMQ03112 1051 aa8.4□□□□□ -1.06
PDGFC-203ENST00000502773 ENOX1Q8TC92 643 aaKnown RBP8.4□□□□□ -1.06
PDGFC-203ENST00000502773 CCDC17Q96LX7 622 aa8.4□□□□□ -1.06
PDGFC-203ENST00000502773 COA1Q9GZY4 146 aa8.4□□□□□ -1.06
PDGFC-203ENST00000502773 OSBPL5Q9H0X9 879 aaPredicted RBP8.4□□□□□ -1.06
PDGFC-203ENST00000502773 ZNHIT6Q9NWK9 470 aaKnown RBP8.4□□□□□ -1.06
PDGFC-203ENST00000502773 TAF6LQ9Y6J9 622 aa8.4□□□□□ -1.06
PDGFC-203ENST00000502773 V9GY48 417 aaPredicted RBP8.4□□□□□ -1.06
PDGFC-203ENST00000502773 SHANK3Q9BYB0 1731 aa8.4□□□□□ -1.06
PDGFC-203ENST00000502773 MARCKSP29966 332 aaPredicted RBP8.4□□□□□ -1.07
PDGFC-203ENST00000502773 GPS2Q13227 327 aa8.4□□□□□ -1.07
PDGFC-203ENST00000502773 SNW1Q13573 536 aaKnown RBP8.4□□□□□ -1.07
PDGFC-203ENST00000502773 HOMER1Q86YM7 354 aa8.4□□□□□ -1.07
PDGFC-203ENST00000502773 PHKBQ93100 1093 aa8.4□□□□□ -1.07
PDGFC-203ENST00000502773 NUP98P52948 1817 aa8.4□□□□□ -1.07
PDGFC-203ENST00000502773 PARP1P09874 1014 aaKnown RBP8.4□□□□□ -1.07
PDGFC-203ENST00000502773 UBA7P41226 1012 aa8.4□□□□□ -1.07
PDGFC-203ENST00000502773 SSR1P43307 286 aaKnown RBP8.4□□□□□ -1.07
PDGFC-203ENST00000502773 NTRK3Q16288 839 aa8.4□□□□□ -1.07
PDGFC-203ENST00000502773 CALML4Q96GE6 196 aa8.4□□□□□ -1.07
PDGFC-203ENST00000502773 RIOK1Q9BRS2 568 aaKnown RBP8.4□□□□□ -1.07
PDGFC-203ENST00000502773 EPB41L4AQ9HCS5 686 aaPredicted RBP8.4□□□□□ -1.07
PDGFC-203ENST00000502773 CABP5Q9NP86 173 aa8.4□□□□□ -1.07
PDGFC-203ENST00000502773 PRDM4Q9UKN5 801 aa8.4□□□□□ -1.07
PDGFC-203ENST00000502773 TOGARAM1Q9Y4F4 1720 aa8.39□□□□□ -1.07
PDGFC-203ENST00000502773 IQCB1Q15051 598 aa8.39□□□□□ -1.07
PDGFC-203ENST00000502773 CTR9Q6PD62 1173 aa8.39□□□□□ -1.07
PDGFC-203ENST00000502773 DTHD1Q6ZMT9 781 aa8.39□□□□□ -1.07
PDGFC-203ENST00000502773 CCDC144CPQ8IYA2 1237 aa8.39□□□□□ -1.07
PDGFC-203ENST00000502773 CERKQ8TCT0 537 aa8.39□□□□□ -1.07
PDGFC-203ENST00000502773 ARHGEF1Q92888 912 aaKnown RBP8.39□□□□□ -1.07
PDGFC-203ENST00000502773 DCP1AQ9NPI6 582 aaPredicted RBP8.39□□□□□ -1.07
PDGFC-203ENST00000502773 MYO3BQ8WXR4 1341 aa8.39□□□□□ -1.07
PDGFC-203ENST00000502773 BICDL2A1A5D9 508 aa8.39□□□□□ -1.07
PDGFC-203ENST00000502773 UFL1O94874 794 aa8.39□□□□□ -1.07
PDGFC-203ENST00000502773 SLFN14P0C7P3 912 aa8.39□□□□□ -1.07
PDGFC-203ENST00000502773 PFKFB3Q16875 520 aaPredicted RBP8.39□□□□□ -1.07
PDGFC-203ENST00000502773 FILIP1Q7Z7B0 1213 aa8.39□□□□□ -1.07
PDGFC-203ENST00000502773 TEX11Q8IYF3 940 aa8.39□□□□□ -1.07
PDGFC-203ENST00000502773 FAM163AQ96GL9 167 aaPredicted RBP8.39□□□□□ -1.07
PDGFC-203ENST00000502773 CDK5RAP3Q96JB5 506 aa8.39□□□□□ -1.07
PDGFC-203ENST00000502773 HPSEQ9Y251 543 aa8.39□□□□□ -1.07
PDGFC-203ENST00000502773 DOT1LQ8TEK3 1739 aa8.39□□□□□ -1.07
PDGFC-203ENST00000502773 C6orf229H3BNL8 230 aa8.39□□□□□ -1.07
PDGFC-203ENST00000502773 TUBBP07437 444 aa8.39□□□□□ -1.07
PDGFC-203ENST00000502773 PPP1R18Q6NYC8 613 aa8.39□□□□□ -1.07
PDGFC-203ENST00000502773 SP8Q8IXZ3 490 aa8.39□□□□□ -1.07
PDGFC-203ENST00000502773 BLIDQ8IZY5 108 aa8.39□□□□□ -1.07
PDGFC-203ENST00000502773 KCND1Q9NSA2 647 aa8.39□□□□□ -1.07
PDGFC-203ENST00000502773 BTBD18B2RXH4 712 aa8.38□□□□□ -1.07
PDGFC-203ENST00000502773 FANCCQ00597 558 aa8.38□□□□□ -1.07
PDGFC-203ENST00000502773 TFAP4Q01664 338 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms