RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 EDC3Q96F86 508 aaKnown RBP17.93■□□□□ 0.46
SEC61A1-207ENST00000498837 FLRT1Q9NZU1 646 aa17.93■□□□□ 0.46
SEC61A1-207ENST00000498837 STXBP5LQ9Y2K9 1186 aa17.93■□□□□ 0.46
SEC61A1-207ENST00000498837 RABGAP1Q9Y3P9 1069 aa17.93■□□□□ 0.46
SEC61A1-207ENST00000498837 NAV1Q8NEY1 1877 aa17.92■□□□□ 0.46
SEC61A1-207ENST00000498837 SURF6O75683 361 aaKnown RBP17.92■□□□□ 0.46
SEC61A1-207ENST00000498837 ATP8B2P98198 1209 aa17.92■□□□□ 0.46
SEC61A1-207ENST00000498837 TATDN1Q6P1N9 297 aa17.92■□□□□ 0.46
SEC61A1-207ENST00000498837 MIGA1Q8NAN2 632 aa17.92■□□□□ 0.46
SEC61A1-207ENST00000498837 SSH3Q8TE77 659 aa17.92■□□□□ 0.46
SEC61A1-207ENST00000498837 ZNF512BQ96KM6 892 aaPredicted RBP17.92■□□□□ 0.46
SEC61A1-207ENST00000498837 C12orf42Q96LP6 360 aa17.92■□□□□ 0.46
SEC61A1-207ENST00000498837 CWC22Q9HCG8 908 aaKnown RBP17.92■□□□□ 0.46
SEC61A1-207ENST00000498837 TLR7Q9NYK1 1049 aaKnown RBP17.92■□□□□ 0.46
SEC61A1-207ENST00000498837 LTBP2Q14767 1821 aa17.92■□□□□ 0.46
SEC61A1-207ENST00000498837 USP17L15C9J2P7 530 aa17.91■□□□□ 0.46
SEC61A1-207ENST00000498837 USP17L13C9JLJ4 530 aa17.91■□□□□ 0.46
SEC61A1-207ENST00000498837 USP17L11C9JVI0 530 aa17.91■□□□□ 0.46
SEC61A1-207ENST00000498837 USP17L18D6R9N7 530 aa17.91■□□□□ 0.46
SEC61A1-207ENST00000498837 USP17L22D6RA61 530 aa17.91■□□□□ 0.46
SEC61A1-207ENST00000498837 USP17L17D6RBQ6 530 aa17.91■□□□□ 0.46
SEC61A1-207ENST00000498837 USP17L19D6RCP7 530 aa17.91■□□□□ 0.46
SEC61A1-207ENST00000498837 USP17L20D6RJB6 530 aa17.91■□□□□ 0.46
SEC61A1-207ENST00000498837 USP17L24Q0WX57 530 aa17.91■□□□□ 0.46
SEC61A1-207ENST00000498837 WDR78Q5VTH9 848 aa17.91■□□□□ 0.46
SEC61A1-207ENST00000498837 CATSPERGQ6ZRH7 1159 aa17.91■□□□□ 0.46
SEC61A1-207ENST00000498837 FEZ1Q99689 392 aa17.91■□□□□ 0.46
SEC61A1-207ENST00000498837 CCDC8Q9H0W5 538 aaPredicted RBP17.91■□□□□ 0.46
SEC61A1-207ENST00000498837 DBNLQ9UJU6 430 aaKnown RBP17.91■□□□□ 0.46
SEC61A1-207ENST00000498837 IDH1O75874 414 aaKnown RBP17.9■□□□□ 0.46
SEC61A1-207ENST00000498837 USP5P45974 858 aa17.9■□□□□ 0.46
SEC61A1-207ENST00000498837 RAB3GAP1Q15042 981 aa17.9■□□□□ 0.46
SEC61A1-207ENST00000498837 ACER1Q8TDN7 264 aa17.9■□□□□ 0.46
SEC61A1-207ENST00000498837 SENP6Q9GZR1 1112 aaPredicted RBP17.9■□□□□ 0.46
SEC61A1-207ENST00000498837 C1orf115Q9H7X2 142 aa17.9■□□□□ 0.46
SEC61A1-207ENST00000498837 BTBD7Q9P203 1132 aa17.9■□□□□ 0.46
SEC61A1-207ENST00000498837 PARP14Q460N5 1801 aa17.89■□□□□ 0.45
SEC61A1-207ENST00000498837 SLC15A5A6NIM6 579 aa17.89■□□□□ 0.45
SEC61A1-207ENST00000498837 IGSF3O75054 1194 aa17.89■□□□□ 0.45
SEC61A1-207ENST00000498837 GLRX3O76003 335 aaKnown RBP17.89■□□□□ 0.45
SEC61A1-207ENST00000498837 PTPREP23469 700 aa17.89■□□□□ 0.45
SEC61A1-207ENST00000498837 CCNA1P78396 465 aa17.89■□□□□ 0.45
SEC61A1-207ENST00000498837 MFSD14CQ5VZR4 134 aa17.89■□□□□ 0.45
SEC61A1-207ENST00000498837 MAGEB6Q8N7X4 407 aa17.89■□□□□ 0.45
SEC61A1-207ENST00000498837 NPLOC4Q8TAT6 608 aa17.89■□□□□ 0.45
SEC61A1-207ENST00000498837 EAF2Q96CJ1 260 aaPredicted RBP17.89■□□□□ 0.45
SEC61A1-207ENST00000498837 SERPINB13Q9UIV8 391 aa17.89■□□□□ 0.45
SEC61A1-207ENST00000498837 COL11A1P12107 1806 aaPredicted RBP17.88■□□□□ 0.45
SEC61A1-207ENST00000498837 BAZ2AQ9UIF9 1905 aaKnown RBP17.88■□□□□ 0.45
SEC61A1-207ENST00000498837 VCAM1P19320 739 aa17.88■□□□□ 0.45
SEC61A1-207ENST00000498837 CNGA1P29973 690 aa17.88■□□□□ 0.45
SEC61A1-207ENST00000498837 USP14P54578 494 aa17.88■□□□□ 0.45
SEC61A1-207ENST00000498837 ABCB5Q2M3G0 1257 aa17.88■□□□□ 0.45
SEC61A1-207ENST00000498837 CERKLQ49MI3 558 aaPredicted RBP17.88■□□□□ 0.45
SEC61A1-207ENST00000498837 KIAA1683Q9H0B3 1180 aa17.88■□□□□ 0.45
SEC61A1-207ENST00000498837 EHD4Q9H223 541 aa17.88■□□□□ 0.45
SEC61A1-207ENST00000498837 ANTXR1Q9H6X2 564 aa17.88■□□□□ 0.45
SEC61A1-207ENST00000498837 NOP58Q9Y2X3 529 aaKnown RBP17.88■□□□□ 0.45
SEC61A1-207ENST00000498837 CYP2C19P33261 490 aa17.87■□□□□ 0.45
SEC61A1-207ENST00000498837 PLCD1P51178 756 aa17.87■□□□□ 0.45
SEC61A1-207ENST00000498837 ATN1P54259 1190 aaPredicted RBP17.87■□□□□ 0.45
SEC61A1-207ENST00000498837 ATP2B2Q01814 1243 aa17.87■□□□□ 0.45
SEC61A1-207ENST00000498837 LBX2Q6XYB7 198 aa17.87■□□□□ 0.45
SEC61A1-207ENST00000498837 TRPV1Q8NER1 839 aa17.87■□□□□ 0.45
SEC61A1-207ENST00000498837 DDX20Q9UHI6 824 aaKnown RBP17.87■□□□□ 0.45
SEC61A1-207ENST00000498837 ZNF236Q9UL36 1845 aa17.86■□□□□ 0.45
SEC61A1-207ENST00000498837 PLXNA1Q9UIW2 1896 aa17.86■□□□□ 0.45
SEC61A1-207ENST00000498837 SPDYE16A6NNV3 312 aaPredicted RBP17.86■□□□□ 0.45
SEC61A1-207ENST00000498837 POTEB2H3BUK9 544 aa17.86■□□□□ 0.45
SEC61A1-207ENST00000498837 HOXC6P09630 235 aa17.86■□□□□ 0.45
SEC61A1-207ENST00000498837 GUCY1A2P33402 732 aa17.86■□□□□ 0.45
SEC61A1-207ENST00000498837 SHMT1P34896 483 aa17.86■□□□□ 0.45
SEC61A1-207ENST00000498837 GRB14Q14449 540 aa17.86■□□□□ 0.45
SEC61A1-207ENST00000498837 ZKSCAN2Q63HK3 967 aa17.86■□□□□ 0.45
SEC61A1-207ENST00000498837 TTC6Q86TZ1 520 aa17.86■□□□□ 0.45
SEC61A1-207ENST00000498837 RPAP3Q9H6T3 665 aaPredicted RBP17.86■□□□□ 0.45
SEC61A1-207ENST00000498837 CABP5Q9NP86 173 aa17.86■□□□□ 0.45
SEC61A1-207ENST00000498837 IVNS1ABPQ9Y6Y0 642 aa17.86■□□□□ 0.45
SEC61A1-207ENST00000498837 A0A0G2JMZ2 1700 aa17.86■□□□□ 0.45
SEC61A1-207ENST00000498837 LPAR1Q92633 364 aa17.85■□□□□ 0.45
SEC61A1-207ENST00000498837 IGHA2P01877 340 aa17.84■□□□□ 0.45
SEC61A1-207ENST00000498837 EVX2Q03828 476 aa17.84■□□□□ 0.45
SEC61A1-207ENST00000498837 SEPT2Q15019 361 aa17.84■□□□□ 0.45
SEC61A1-207ENST00000498837 CERS3Q8IU89 383 aa17.84■□□□□ 0.45
SEC61A1-207ENST00000498837 FAM161BQ96MY7 647 aa17.84■□□□□ 0.45
SEC61A1-207ENST00000498837 GUCD1Q96NT3 240 aa17.84■□□□□ 0.45
SEC61A1-207ENST00000498837 LBHD1Q9BQE6 289 aaPredicted RBP17.84■□□□□ 0.45
SEC61A1-207ENST00000498837 DNM1LO00429 736 aa17.83■□□□□ 0.44
SEC61A1-207ENST00000498837 MSCO60682 206 aa17.83■□□□□ 0.44
SEC61A1-207ENST00000498837 CYBAP13498 195 aa17.83■□□□□ 0.44
SEC61A1-207ENST00000498837 RTP1P59025 263 aa17.83■□□□□ 0.44
SEC61A1-207ENST00000498837 MAP3K12Q12852 859 aa17.83■□□□□ 0.44
SEC61A1-207ENST00000498837 GJC2Q5T442 439 aaPredicted RBP17.83■□□□□ 0.44
SEC61A1-207ENST00000498837 RIOK1Q9BRS2 568 aaKnown RBP17.83■□□□□ 0.44
SEC61A1-207ENST00000498837 EYSQ5T1H1 3165 aa17.83■□□□□ 0.44
SEC61A1-207ENST00000498837 A0A1W2PRG0 241 aa17.82■□□□□ 0.44
SEC61A1-207ENST00000498837 POLR3DP05423 398 aaPredicted RBP17.82■□□□□ 0.44
SEC61A1-207ENST00000498837 ANO1Q5XXA6 986 aa17.82■□□□□ 0.44
SEC61A1-207ENST00000498837 FAM109BQ6ICB4 259 aaPredicted RBP17.82■□□□□ 0.44
SEC61A1-207ENST00000498837 DPP9Q86TI2 863 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms