RNA–Protein interactions for RNA: ENST00000498787.1

PARP1-209, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2

Gene PARP1, Length 628 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-209ENST00000498787 GRM4Q14833 912 aa16.83■□□□□ 0.28
PARP1-209ENST00000498787 SLC4A8Q2Y0W8 1093 aa16.83■□□□□ 0.28
PARP1-209ENST00000498787 RCSD1Q6JBY9 416 aa16.83■□□□□ 0.28
PARP1-209ENST00000498787 NBPF11Q86T75 865 aa16.83■□□□□ 0.28
PARP1-209ENST00000498787 ZSCAN29Q8IWY8 852 aaPredicted RBP16.83■□□□□ 0.28
PARP1-209ENST00000498787 IL17RBQ9NRM6 502 aa16.83■□□□□ 0.28
PARP1-209ENST00000498787 STX8Q9UNK0 236 aa16.83■□□□□ 0.28
PARP1-209ENST00000498787 SPDYE2BA6NHP3 402 aa16.82■□□□□ 0.28
PARP1-209ENST00000498787 SPDYE6P0CI01 402 aa16.82■□□□□ 0.28
PARP1-209ENST00000498787 EIF6P56537 245 aaKnown RBP16.82■□□□□ 0.28
PARP1-209ENST00000498787 KIF23Q02241 960 aaPredicted RBP16.82■□□□□ 0.28
PARP1-209ENST00000498787 L1TD1Q5T7N2 865 aaKnown RBP16.82■□□□□ 0.28
PARP1-209ENST00000498787 SLC44A5Q8NCS7 719 aa16.82■□□□□ 0.28
PARP1-209ENST00000498787 TMEM47Q9BQJ4 181 aa16.82■□□□□ 0.28
PARP1-209ENST00000498787 ATRNL1Q5VV63 1379 aa16.81■□□□□ 0.28
PARP1-209ENST00000498787 PSDA5PKW4 1024 aaPredicted RBP16.81■□□□□ 0.28
PARP1-209ENST00000498787 NMT2O60551 498 aa16.81■□□□□ 0.28
PARP1-209ENST00000498787 FOSBP53539 338 aa16.81■□□□□ 0.28
PARP1-209ENST00000498787 GUCY1B3Q02153 619 aa16.81■□□□□ 0.28
PARP1-209ENST00000498787 EVX2Q03828 476 aa16.81■□□□□ 0.28
PARP1-209ENST00000498787 CXCL9Q07325 125 aa16.81■□□□□ 0.28
PARP1-209ENST00000498787 METTL16Q86W50 562 aaKnown RBP16.81■□□□□ 0.28
PARP1-209ENST00000498787 LEO1Q8WVC0 666 aaPredicted RBP16.81■□□□□ 0.28
PARP1-209ENST00000498787 FOXP1Q9H334 677 aaPredicted RBP16.81■□□□□ 0.28
PARP1-209ENST00000498787 HERC5Q9UII4 1024 aaKnown RBP16.81■□□□□ 0.28
PARP1-209ENST00000498787 RCOR1Q9UKL0 485 aa16.81■□□□□ 0.28
PARP1-209ENST00000498787 DDX60LQ5H9U9 1706 aaKnown RBP16.8■□□□□ 0.28
PARP1-209ENST00000498787 YEATS4O95619 227 aa16.8■□□□□ 0.28
PARP1-209ENST00000498787 TTLL1O95922 423 aa16.8■□□□□ 0.28
PARP1-209ENST00000498787 MMP1P03956 469 aa16.8■□□□□ 0.28
PARP1-209ENST00000498787 PARP1P09874 1014 aaKnown RBP16.8■□□□□ 0.28
PARP1-209ENST00000498787 U2AF2P26368 475 aaKnown RBP eCLIP16.8■□□□□ 0.28
PARP1-209ENST00000498787 TNNI2P48788 182 aa16.8■□□□□ 0.28
PARP1-209ENST00000498787 NFIAQ12857 509 aa16.8■□□□□ 0.28
PARP1-209ENST00000498787 CAVIN1Q6NZI2 390 aaKnown RBP16.8■□□□□ 0.28
PARP1-209ENST00000498787 GPT2Q8TD30 523 aa16.8■□□□□ 0.28
PARP1-209ENST00000498787 KCNG4Q8TDN1 519 aa16.8■□□□□ 0.28
PARP1-209ENST00000498787 FAM151AQ8WW52 585 aa16.8■□□□□ 0.28
PARP1-209ENST00000498787 GZF1Q9H116 711 aaPredicted RBP16.8■□□□□ 0.28
PARP1-209ENST00000498787 TDRD3Q9H7E2 651 aaKnown RBP16.8■□□□□ 0.28
PARP1-209ENST00000498787 GDPD2Q9HCC8 539 aa16.8■□□□□ 0.28
PARP1-209ENST00000498787 SH3GLB2Q9NR46 395 aa16.8■□□□□ 0.28
PARP1-209ENST00000498787 POLR3EQ9NVU0 708 aa16.8■□□□□ 0.28
PARP1-209ENST00000498787 MTMR4Q9NYA4 1195 aa16.8■□□□□ 0.28
PARP1-209ENST00000498787 RTEL1Q9NZ71 1219 aa16.8■□□□□ 0.28
PARP1-209ENST00000498787 FAM198AQ9UFP1 575 aa16.8■□□□□ 0.28
PARP1-209ENST00000498787 IGKV6D-41A0A0C4DH26 115 aa16.79■□□□□ 0.28
PARP1-209ENST00000498787 GOLGA6L3A6NEY3 463 aa16.79■□□□□ 0.28
PARP1-209ENST00000498787 NFKBIEO00221 500 aa16.79■□□□□ 0.28
PARP1-209ENST00000498787 DTNBO60941 627 aa16.79■□□□□ 0.28
PARP1-209ENST00000498787 CALML3P27482 149 aa16.79■□□□□ 0.28
PARP1-209ENST00000498787 FUT2Q10981 343 aa16.79■□□□□ 0.28
PARP1-209ENST00000498787 SPDYE2Q495Y8 402 aa16.79■□□□□ 0.28
PARP1-209ENST00000498787 MYSM1Q5VVJ2 828 aa16.79■□□□□ 0.28
PARP1-209ENST00000498787 FAM83AQ86UY5 434 aa16.79■□□□□ 0.28
PARP1-209ENST00000498787 JMYQ8N9B5 988 aa16.79■□□□□ 0.28
PARP1-209ENST00000498787 DPF2Q92785 391 aa16.79■□□□□ 0.28
PARP1-209ENST00000498787 PRMT6Q96LA8 375 aaPredicted RBP16.79■□□□□ 0.28
PARP1-209ENST00000498787 KANSL2Q9H9L4 492 aa16.79■□□□□ 0.28
PARP1-209ENST00000498787 TFIP11Q9UBB9 837 aaKnown RBP16.79■□□□□ 0.28
PARP1-209ENST00000498787 V9GY48 417 aaPredicted RBP16.79■□□□□ 0.28
PARP1-209ENST00000498787 FOCADQ5VW36 1801 aa16.78■□□□□ 0.28
PARP1-209ENST00000498787 PPFIA3O75145 1194 aa16.78■□□□□ 0.28
PARP1-209ENST00000498787 SHMT1P34896 483 aa16.78■□□□□ 0.28
PARP1-209ENST00000498787 TCP10Q12799 353 aa16.78■□□□□ 0.28
PARP1-209ENST00000498787 TNFAIP1Q13829 316 aa16.78■□□□□ 0.28
PARP1-209ENST00000498787 SF3A1Q15459 793 aaKnown RBP16.78■□□□□ 0.28
PARP1-209ENST00000498787 CERKLQ49MI3 558 aaPredicted RBP16.78■□□□□ 0.28
PARP1-209ENST00000498787 ASPRV1Q53RT3 343 aa16.78■□□□□ 0.28
PARP1-209ENST00000498787 GALNT17Q6IS24 598 aa16.78■□□□□ 0.28
PARP1-209ENST00000498787 TATDN1Q6P1N9 297 aa16.78■□□□□ 0.28
PARP1-209ENST00000498787 CCDC82Q8N4S0 544 aa16.78■□□□□ 0.28
PARP1-209ENST00000498787 CCDC148Q8NFR7 591 aa16.78■□□□□ 0.28
PARP1-209ENST00000498787 CCDC12Q8WUD4 166 aaPredicted RBP16.78■□□□□ 0.28
PARP1-209ENST00000498787 CEP95Q96GE4 821 aa16.78■□□□□ 0.28
PARP1-209ENST00000498787 CABP5Q9NP86 173 aa16.78■□□□□ 0.28
PARP1-209ENST00000498787 ZNF70Q9UC06 446 aaPredicted RBP16.78■□□□□ 0.28
PARP1-209ENST00000498787 SYNPO2Q9UMS6 1093 aa16.78■□□□□ 0.28
PARP1-209ENST00000498787 CNTNAP5Q8WYK1 1306 aa16.77■□□□□ 0.28
PARP1-209ENST00000498787 MYH1P12882 1939 aa16.77■□□□□ 0.28
PARP1-209ENST00000498787 PALM3A6NDB9 673 aaPredicted RBP16.77■□□□□ 0.28
PARP1-209ENST00000498787 hCG_1984214I3L0E3 225 aa16.77■□□□□ 0.28
PARP1-209ENST00000498787 PLEKHA8P1O95397 391 aa16.77■□□□□ 0.28
PARP1-209ENST00000498787 SCG2P13521 617 aa16.77■□□□□ 0.28
PARP1-209ENST00000498787 ZNF445P59923 1031 aa16.77■□□□□ 0.28
PARP1-209ENST00000498787 STK38Q15208 465 aa16.77■□□□□ 0.28
PARP1-209ENST00000498787 PFKFB3Q16875 520 aaPredicted RBP16.77■□□□□ 0.28
PARP1-209ENST00000498787 RILPL1Q5EBL4 403 aa16.77■□□□□ 0.28
PARP1-209ENST00000498787 CCDC183Q5T5S1 534 aa16.77■□□□□ 0.28
PARP1-209ENST00000498787 TMEM179Q6ZVK1 233 aa16.77■□□□□ 0.28
PARP1-209ENST00000498787 NOSTRINQ8IVI9 506 aa16.77■□□□□ 0.28
PARP1-209ENST00000498787 SRBD1Q8N5C6 995 aaKnown RBP16.77■□□□□ 0.28
PARP1-209ENST00000498787 ZNF713Q8N859 430 aaPredicted RBP16.77■□□□□ 0.28
PARP1-209ENST00000498787 CHAMP1Q96JM3 812 aa16.77■□□□□ 0.28
PARP1-209ENST00000498787 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.77■□□□□ 0.28
PARP1-209ENST00000498787 SPZ1Q9BXG8 430 aa16.77■□□□□ 0.28
PARP1-209ENST00000498787 NYAP2Q9P242 653 aa16.77■□□□□ 0.28
PARP1-209ENST00000498787 CEP131Q9UPN4 1083 aa16.77■□□□□ 0.28
PARP1-209ENST00000498787 SCN9AQ15858 1988 aa16.77■□□□□ 0.27
PARP1-209ENST00000498787 PSME4Q14997 1843 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms