RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 FGD1P98174 961 aa15.97■□□□□ 0.15
CPNE1-227ENST00000498056 OTUD5Q96G74 571 aa15.97■□□□□ 0.15
CPNE1-227ENST00000498056 FEZ1Q99689 392 aa15.97■□□□□ 0.15
CPNE1-227ENST00000498056 STX8Q9UNK0 236 aa15.97■□□□□ 0.15
CPNE1-227ENST00000498056 CYP46A1Q9Y6A2 500 aa15.97■□□□□ 0.15
CPNE1-227ENST00000498056 IFIT3O14879 490 aaKnown RBP15.96■□□□□ 0.15
CPNE1-227ENST00000498056 PTPRAP18433 802 aa15.96■□□□□ 0.15
CPNE1-227ENST00000498056 GUCY1A2P33402 732 aa15.96■□□□□ 0.15
CPNE1-227ENST00000498056 ZYXQ15942 572 aaKnown RBP15.96■□□□□ 0.15
CPNE1-227ENST00000498056 TMEM67Q5HYA8 995 aa15.96■□□□□ 0.15
CPNE1-227ENST00000498056 PAXIP1Q6ZW49 1069 aaPredicted RBP15.96■□□□□ 0.15
CPNE1-227ENST00000498056 RUFY3Q7L099 469 aa15.96■□□□□ 0.15
CPNE1-227ENST00000498056 DHX32Q7L7V1 743 aaKnown RBP15.96■□□□□ 0.15
CPNE1-227ENST00000498056 LRRC47Q8N1G4 583 aaKnown RBP15.96■□□□□ 0.15
CPNE1-227ENST00000498056 CNKSR2Q8WXI2 1034 aa15.96■□□□□ 0.15
CPNE1-227ENST00000498056 ZSCAN10Q96SZ4 725 aaPredicted RBP15.96■□□□□ 0.15
CPNE1-227ENST00000498056 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.96■□□□□ 0.15
CPNE1-227ENST00000498056 TM6SF1Q9BZW5 370 aa15.96■□□□□ 0.15
CPNE1-227ENST00000498056 AS3MTQ9HBK9 375 aa15.96■□□□□ 0.15
CPNE1-227ENST00000498056 ARHGEF10LQ9HCE6 1279 aa15.96■□□□□ 0.15
CPNE1-227ENST00000498056 GINM1Q9NU53 330 aa15.96■□□□□ 0.15
CPNE1-227ENST00000498056 TLL2Q9Y6L7 1015 aa15.96■□□□□ 0.15
CPNE1-227ENST00000498056 WDR19Q8NEZ3 1342 aa15.95■□□□□ 0.14
CPNE1-227ENST00000498056 THSD7BQ9C0I4 1608 aa15.95■□□□□ 0.14
CPNE1-227ENST00000498056 IGKV6D-41A0A0C4DH26 115 aa15.95■□□□□ 0.14
CPNE1-227ENST00000498056 USP17L5A8MUK1 530 aa15.95■□□□□ 0.14
CPNE1-227ENST00000498056 APLP1P51693 650 aa15.95■□□□□ 0.14
CPNE1-227ENST00000498056 WTAPQ15007 396 aa15.95■□□□□ 0.14
CPNE1-227ENST00000498056 LDLRAD1Q5T700 205 aa15.95■□□□□ 0.14
CPNE1-227ENST00000498056 SAPCD2Q86UD0 394 aa15.95■□□□□ 0.14
CPNE1-227ENST00000498056 ENAHQ8N8S7 591 aaPredicted RBP15.95■□□□□ 0.14
CPNE1-227ENST00000498056 OPTNQ96CV9 577 aa15.95■□□□□ 0.14
CPNE1-227ENST00000498056 KANSL2Q9H9L4 492 aa15.95■□□□□ 0.14
CPNE1-227ENST00000498056 ZSWIM6Q9HCJ5 1215 aa15.95■□□□□ 0.14
CPNE1-227ENST00000498056 SPDYE5A6NIY4 337 aa15.94■□□□□ 0.14
CPNE1-227ENST00000498056 TRIM75PA6NK02 468 aa15.94■□□□□ 0.14
CPNE1-227ENST00000498056 SH2B2O14492 632 aaPredicted RBP15.94■□□□□ 0.14
CPNE1-227ENST00000498056 RAD21O60216 631 aa15.94■□□□□ 0.14
CPNE1-227ENST00000498056 TTLL1O95922 423 aa15.94■□□□□ 0.14
CPNE1-227ENST00000498056 EEF2P13639 858 aaKnown RBP15.94■□□□□ 0.14
CPNE1-227ENST00000498056 MKRN3Q13064 507 aaKnown RBP15.94■□□□□ 0.14
CPNE1-227ENST00000498056 RABEP1Q15276 862 aa15.94■□□□□ 0.14
CPNE1-227ENST00000498056 PPP4R3BQ5MIZ7 849 aa15.94■□□□□ 0.14
CPNE1-227ENST00000498056 IFIT1BQ5T764 474 aaKnown RBP15.94■□□□□ 0.14
CPNE1-227ENST00000498056 NFXL1Q6ZNB6 911 aa15.94■□□□□ 0.14
CPNE1-227ENST00000498056 NOL8Q76FK4 1167 aaKnown RBP15.94■□□□□ 0.14
CPNE1-227ENST00000498056 IL17RAQ96F46 866 aa15.94■□□□□ 0.14
CPNE1-227ENST00000498056 TMEM87BQ96K49 555 aa15.94■□□□□ 0.14
CPNE1-227ENST00000498056 KIF2CQ99661 725 aa15.94■□□□□ 0.14
CPNE1-227ENST00000498056 GPHNQ9NQX3 736 aaPredicted RBP15.94■□□□□ 0.14
CPNE1-227ENST00000498056 IL17RBQ9NRM6 502 aa15.94■□□□□ 0.14
CPNE1-227ENST00000498056 PDRG1Q9NUG6 133 aa15.94■□□□□ 0.14
CPNE1-227ENST00000498056 MTMR4Q9NYA4 1195 aa15.94■□□□□ 0.14
CPNE1-227ENST00000498056 MTMR7Q9Y216 660 aa15.94■□□□□ 0.14
CPNE1-227ENST00000498056 ECE1P42892 770 aa15.93■□□□□ 0.14
CPNE1-227ENST00000498056 ZNF157P51786 506 aaPredicted RBP15.93■□□□□ 0.14
CPNE1-227ENST00000498056 NEK4P51957 841 aa15.93■□□□□ 0.14
CPNE1-227ENST00000498056 GRM1Q13255 1194 aa15.93■□□□□ 0.14
CPNE1-227ENST00000498056 MTMR2Q13614 643 aa15.93■□□□□ 0.14
CPNE1-227ENST00000498056 CCDC178Q5BJE1 867 aa15.93■□□□□ 0.14
CPNE1-227ENST00000498056 Q6ZUG5 572 aa15.93■□□□□ 0.14
CPNE1-227ENST00000498056 ERO1BQ86YB8 467 aa15.93■□□□□ 0.14
CPNE1-227ENST00000498056 SLC10A4Q96EP9 437 aa15.93■□□□□ 0.14
CPNE1-227ENST00000498056 SH2D4AQ9H788 454 aa15.93■□□□□ 0.14
CPNE1-227ENST00000498056 KAT14Q9H8E8 782 aa15.93■□□□□ 0.14
CPNE1-227ENST00000498056 TCP11L1Q9NUJ3 509 aa15.93■□□□□ 0.14
CPNE1-227ENST00000498056 CLIP2Q9UDT6 1046 aa15.93■□□□□ 0.14
CPNE1-227ENST00000498056 ISY1Q9ULR0 285 aaKnown RBP15.93■□□□□ 0.14
CPNE1-227ENST00000498056 NAP1L2Q9ULW6 460 aaPredicted RBP15.93■□□□□ 0.14
CPNE1-227ENST00000498056 ZHX2Q9Y6X8 837 aa15.93■□□□□ 0.14
CPNE1-227ENST00000498056 A0A0G2JMZ2 1700 aa15.92■□□□□ 0.14
CPNE1-227ENST00000498056 CCDC69A6NI79 296 aa15.92■□□□□ 0.14
CPNE1-227ENST00000498056 UNCXA6NJT0 531 aa15.92■□□□□ 0.14
CPNE1-227ENST00000498056 SEC23AQ15436 765 aa15.92■□□□□ 0.14
CPNE1-227ENST00000498056 RGMBQ6NW40 437 aa15.92■□□□□ 0.14
CPNE1-227ENST00000498056 RASAL3Q86YV0 1011 aa15.92■□□□□ 0.14
CPNE1-227ENST00000498056 ZNF280CQ8ND82 737 aa15.92■□□□□ 0.14
CPNE1-227ENST00000498056 ACER1Q8TDN7 264 aa15.92■□□□□ 0.14
CPNE1-227ENST00000498056 BRF1Q92994 677 aa15.92■□□□□ 0.14
CPNE1-227ENST00000498056 CHMP4CQ96CF2 233 aa15.92■□□□□ 0.14
CPNE1-227ENST00000498056 WNK4Q96J92 1243 aa15.92■□□□□ 0.14
CPNE1-227ENST00000498056 TBC1D2Q9BYX2 928 aa15.92■□□□□ 0.14
CPNE1-227ENST00000498056 LY9Q9HBG7 655 aa15.92■□□□□ 0.14
CPNE1-227ENST00000498056 SENP2Q9HC62 589 aa15.92■□□□□ 0.14
CPNE1-227ENST00000498056 CREBZFQ9NS37 354 aa15.92■□□□□ 0.14
CPNE1-227ENST00000498056 NYAP2Q9P242 653 aa15.92■□□□□ 0.14
CPNE1-227ENST00000498056 RBBP6Q7Z6E9 1792 aaKnown RBP15.92■□□□□ 0.14
CPNE1-227ENST00000498056 TOP1P11387 765 aaKnown RBP15.91■□□□□ 0.14
CPNE1-227ENST00000498056 EXOSC10Q01780 885 aaKnown RBP15.91■□□□□ 0.14
CPNE1-227ENST00000498056 PPATQ06203 517 aa15.91■□□□□ 0.14
CPNE1-227ENST00000498056 SPP2Q13103 211 aa15.91■□□□□ 0.14
CPNE1-227ENST00000498056 PPIL2Q13356 520 aa15.91■□□□□ 0.14
CPNE1-227ENST00000498056 RCSD1Q6JBY9 416 aa15.91■□□□□ 0.14
CPNE1-227ENST00000498056 RASGRP2Q7LDG7 609 aa15.91■□□□□ 0.14
CPNE1-227ENST00000498056 TMEM47Q9BQJ4 181 aa15.91■□□□□ 0.14
CPNE1-227ENST00000498056 MTA3Q9BTC8 594 aa15.91■□□□□ 0.14
CPNE1-227ENST00000498056 GOPCQ9HD26 462 aa15.91■□□□□ 0.14
CPNE1-227ENST00000498056 RLFQ13129 1914 aa15.91■□□□□ 0.14
CPNE1-227ENST00000498056 KLF18A0A0U1RQI7 1052 aa15.9■□□□□ 0.14
CPNE1-227ENST00000498056 A0A1W2PRG0 241 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms