RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 PLA2G4AP47712 749 aa14.84□□□□□ -0.03
PTPN7-217ENST00000495688 RNF41Q9H4P4 317 aaPredicted RBP14.84□□□□□ -0.03
PTPN7-217ENST00000495688 DACH1Q9UI36 760 aa14.84□□□□□ -0.03
PTPN7-217ENST00000495688 BAZ2AQ9UIF9 1905 aaKnown RBP14.84□□□□□ -0.03
PTPN7-217ENST00000495688 EXOC5O00471 708 aa14.84□□□□□ -0.03
PTPN7-217ENST00000495688 ZRANB2O95218 330 aaKnown RBP eCLIP14.84□□□□□ -0.03
PTPN7-217ENST00000495688 AKAP17AQ02040 695 aaKnown RBP14.84□□□□□ -0.03
PTPN7-217ENST00000495688 FUT2Q10981 343 aa14.84□□□□□ -0.03
PTPN7-217ENST00000495688 ZNF174Q15697 407 aa14.84□□□□□ -0.03
PTPN7-217ENST00000495688 CCDC152Q4G0S7 254 aa14.84□□□□□ -0.03
PTPN7-217ENST00000495688 ESR2Q92731 530 aa14.84□□□□□ -0.03
PTPN7-217ENST00000495688 RNF26Q9BY78 433 aaPredicted RBP14.84□□□□□ -0.03
PTPN7-217ENST00000495688 CEP131Q9UPN4 1083 aa14.84□□□□□ -0.03
PTPN7-217ENST00000495688 NIP7Q9Y221 180 aaKnown RBP eCLIP14.84□□□□□ -0.03
PTPN7-217ENST00000495688 MAGEB6P1A0A0J9YX57 407 aa14.83□□□□□ -0.03
PTPN7-217ENST00000495688 A0A1B0GTH6 734 aa14.83□□□□□ -0.03
PTPN7-217ENST00000495688 EFCAB8A8MWE9 144 aa14.83□□□□□ -0.03
PTPN7-217ENST00000495688 MAP3K9P80192 1104 aa14.83□□□□□ -0.03
PTPN7-217ENST00000495688 TRIML1Q8N9V2 468 aa14.83□□□□□ -0.03
PTPN7-217ENST00000495688 KIFC2Q96AC6 838 aa14.83□□□□□ -0.03
PTPN7-217ENST00000495688 PAGE5Q96GU1 130 aa14.83□□□□□ -0.03
PTPN7-217ENST00000495688 PHF20Q9BVI0 1012 aa14.83□□□□□ -0.03
PTPN7-217ENST00000495688 LZTFL1Q9NQ48 299 aa14.83□□□□□ -0.03
PTPN7-217ENST00000495688 NHSL1Q5SYE7 1610 aa14.83□□□□□ -0.04
PTPN7-217ENST00000495688 ADAMTS3O15072 1205 aa14.83□□□□□ -0.04
PTPN7-217ENST00000495688 CRKLP46109 303 aaKnown RBP14.83□□□□□ -0.04
PTPN7-217ENST00000495688 RBL2Q08999 1139 aa14.83□□□□□ -0.04
PTPN7-217ENST00000495688 DPYDQ12882 1025 aa14.83□□□□□ -0.04
PTPN7-217ENST00000495688 TMCO3Q6UWJ1 677 aa14.83□□□□□ -0.04
PTPN7-217ENST00000495688 ACSBG1Q96GR2 724 aa14.83□□□□□ -0.04
PTPN7-217ENST00000495688 ZSCAN10Q96SZ4 725 aaPredicted RBP14.83□□□□□ -0.04
PTPN7-217ENST00000495688 NMT2O60551 498 aa14.82□□□□□ -0.04
PTPN7-217ENST00000495688 VEGFAP15692 232 aaPredicted RBP14.82□□□□□ -0.04
PTPN7-217ENST00000495688 KRT2P35908 639 aa14.82□□□□□ -0.04
PTPN7-217ENST00000495688 TEX35Q5T0J7 233 aa14.82□□□□□ -0.04
PTPN7-217ENST00000495688 IFIT1BQ5T764 474 aaKnown RBP14.82□□□□□ -0.04
PTPN7-217ENST00000495688 KANK3Q6NY19 840 aa14.82□□□□□ -0.04
PTPN7-217ENST00000495688 RAD9BQ6WBX8 426 aa14.82□□□□□ -0.04
PTPN7-217ENST00000495688 ZNF384Q8TF68 577 aa14.82□□□□□ -0.04
PTPN7-217ENST00000495688 RIOK1Q9BRS2 568 aaKnown RBP14.82□□□□□ -0.04
PTPN7-217ENST00000495688 SRRTQ9BXP5 876 aaKnown RBP14.82□□□□□ -0.04
PTPN7-217ENST00000495688 ZSWIM4Q9H7M6 989 aa14.82□□□□□ -0.04
PTPN7-217ENST00000495688 AATFQ9NY61 560 aaKnown RBP eCLIP14.82□□□□□ -0.04
PTPN7-217ENST00000495688 MRFAP1Q9Y605 127 aa14.82□□□□□ -0.04
PTPN7-217ENST00000495688 DISP2A7MBM2 1401 aa14.82□□□□□ -0.04
PTPN7-217ENST00000495688 ERICH4A6NGS2 130 aa14.82□□□□□ -0.04
PTPN7-217ENST00000495688 CAMTA2O94983 1202 aa14.82□□□□□ -0.04
PTPN7-217ENST00000495688 PPP2R3AQ06190 1150 aa14.82□□□□□ -0.04
PTPN7-217ENST00000495688 CUL4BQ13620 913 aa14.82□□□□□ -0.04
PTPN7-217ENST00000495688 AK7Q96M32 723 aa14.82□□□□□ -0.04
PTPN7-217ENST00000495688 BLZF1Q9H2G9 400 aa14.82□□□□□ -0.04
PTPN7-217ENST00000495688 COL1A1P02452 1464 aaPredicted RBP14.82□□□□□ -0.04
PTPN7-217ENST00000495688 TAF1P21675 1872 aa14.82□□□□□ -0.04
PTPN7-217ENST00000495688 SYNRGQ9UMZ2 1314 aa14.81□□□□□ -0.04
PTPN7-217ENST00000495688 NTSR2O95665 410 aa14.81□□□□□ -0.04
PTPN7-217ENST00000495688 ERCC5P28715 1186 aaPredicted RBP14.81□□□□□ -0.04
PTPN7-217ENST00000495688 ATP6V1AP38606 617 aa14.81□□□□□ -0.04
PTPN7-217ENST00000495688 TROAPQ12815 778 aa14.81□□□□□ -0.04
PTPN7-217ENST00000495688 NPY5RQ15761 445 aa14.81□□□□□ -0.04
PTPN7-217ENST00000495688 C3orf67Q6ZVT6 689 aa14.81□□□□□ -0.04
PTPN7-217ENST00000495688 IGSF22Q8N9C0 903 aa14.81□□□□□ -0.04
PTPN7-217ENST00000495688 CCDC87Q9NVE4 849 aa14.81□□□□□ -0.04
PTPN7-217ENST00000495688 AKR1B15C9JRZ8 316 aaPredicted RBP14.81□□□□□ -0.04
PTPN7-217ENST00000495688 SASH3O75995 380 aa14.81□□□□□ -0.04
PTPN7-217ENST00000495688 SH3RF1Q7Z6J0 888 aa14.81□□□□□ -0.04
PTPN7-217ENST00000495688 CCDC12Q8WUD4 166 aaPredicted RBP14.81□□□□□ -0.04
PTPN7-217ENST00000495688 PPP1R3GB7ZBB8 358 aa14.8□□□□□ -0.04
PTPN7-217ENST00000495688 PTGDRQ13258 359 aa14.8□□□□□ -0.04
PTPN7-217ENST00000495688 SPATA1Q5VX52 437 aa14.8□□□□□ -0.04
PTPN7-217ENST00000495688 NOL10Q9BSC4 688 aaKnown RBP14.8□□□□□ -0.04
PTPN7-217ENST00000495688 ARGLU1Q9NWB6 273 aaPredicted RBP14.8□□□□□ -0.04
PTPN7-217ENST00000495688 ADD3Q9UEY8 706 aaKnown RBP14.8□□□□□ -0.04
PTPN7-217ENST00000495688 ANAPC4Q9UJX5 808 aa14.8□□□□□ -0.04
PTPN7-217ENST00000495688 CICQ96RK0 1608 aaPredicted RBP14.8□□□□□ -0.04
PTPN7-217ENST00000495688 TFRCP02786 760 aaKnown RBP14.8□□□□□ -0.04
PTPN7-217ENST00000495688 XBP1P17861 261 aa14.8□□□□□ -0.04
PTPN7-217ENST00000495688 CCT6AP40227 531 aaKnown RBP14.8□□□□□ -0.04
PTPN7-217ENST00000495688 RCAN1P53805 252 aa14.8□□□□□ -0.04
PTPN7-217ENST00000495688 ITPK1Q13572 414 aa14.8□□□□□ -0.04
PTPN7-217ENST00000495688 SLC4A8Q2Y0W8 1093 aa14.8□□□□□ -0.04
PTPN7-217ENST00000495688 CATIPQ7Z7H3 387 aa14.8□□□□□ -0.04
PTPN7-217ENST00000495688 ZBTB9Q96C00 473 aa14.8□□□□□ -0.04
PTPN7-217ENST00000495688 MTA3Q9BTC8 594 aa14.8□□□□□ -0.04
PTPN7-217ENST00000495688 BCL9LQ86UU0 1499 aa14.8□□□□□ -0.04
PTPN7-217ENST00000495688 PLCH1Q4KWH8 1693 aa14.8□□□□□ -0.04
PTPN7-217ENST00000495688 RTL9Q8NET4 1388 aa14.8□□□□□ -0.04
PTPN7-217ENST00000495688 GOLGA6L9A6NEM1 432 aa14.79□□□□□ -0.04
PTPN7-217ENST00000495688 POLR3GO15318 223 aaPredicted RBP14.79□□□□□ -0.04
PTPN7-217ENST00000495688 ABL1P00519 1130 aa14.79□□□□□ -0.04
PTPN7-217ENST00000495688 CASP14P31944 242 aa14.79□□□□□ -0.04
PTPN7-217ENST00000495688 ADGRG1Q9Y653 693 aa14.79□□□□□ -0.04
PTPN7-217ENST00000495688 USP17L12C9JPN9 530 aa14.79□□□□□ -0.04
PTPN7-217ENST00000495688 USP17L21D6R901 530 aa14.79□□□□□ -0.04
PTPN7-217ENST00000495688 PRPF3O43395 683 aaKnown RBP14.79□□□□□ -0.04
PTPN7-217ENST00000495688 CCDC175P0C221 793 aa14.79□□□□□ -0.04
PTPN7-217ENST00000495688 CDC25AP30304 524 aa14.79□□□□□ -0.04
PTPN7-217ENST00000495688 FXR1P51114 621 aaKnown RBP eCLIP14.79□□□□□ -0.04
PTPN7-217ENST00000495688 FAM47AQ5JRC9 791 aa14.79□□□□□ -0.04
PTPN7-217ENST00000495688 CDKAL1Q5VV42 579 aa14.79□□□□□ -0.04
PTPN7-217ENST00000495688 SRBD1Q8N5C6 995 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms