RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 LSG1Q9H089 658 aaKnown RBP23.07■■□□□ 1.28
HDAC4-212ENST00000495497 R3HDMLQ9H3Y0 253 aa23.07■■□□□ 1.28
HDAC4-212ENST00000495497 TOMM22Q9NS69 142 aa23.07■■□□□ 1.28
HDAC4-212ENST00000495497 GTF3C3Q9Y5Q9 886 aa23.07■■□□□ 1.28
HDAC4-212ENST00000495497 A0A1W2PRG0 241 aa23.06■■□□□ 1.28
HDAC4-212ENST00000495497 BACE1P56817 501 aa23.06■■□□□ 1.28
HDAC4-212ENST00000495497 TFAP4Q01664 338 aa23.06■■□□□ 1.28
HDAC4-212ENST00000495497 RRP12Q5JTH9 1297 aaKnown RBP23.06■■□□□ 1.28
HDAC4-212ENST00000495497 KIAA1211Q6ZU35 1233 aa23.06■■□□□ 1.28
HDAC4-212ENST00000495497 SIAH1Q8IUQ4 282 aa23.06■■□□□ 1.28
HDAC4-212ENST00000495497 NKX2-3Q8TAU0 364 aa23.06■■□□□ 1.28
HDAC4-212ENST00000495497 CTNNA3Q9UI47 895 aa23.06■■□□□ 1.28
HDAC4-212ENST00000495497 FGRP09769 529 aa23.05■■□□□ 1.28
HDAC4-212ENST00000495497 ATP2B2Q01814 1243 aa23.05■■□□□ 1.28
HDAC4-212ENST00000495497 ICA1Q05084 483 aa23.05■■□□□ 1.28
HDAC4-212ENST00000495497 IMMTQ16891 758 aaKnown RBP23.05■■□□□ 1.28
HDAC4-212ENST00000495497 SH3D19Q5HYK7 790 aa23.05■■□□□ 1.28
HDAC4-212ENST00000495497 AKNAD1Q5T1N1 836 aa23.05■■□□□ 1.28
HDAC4-212ENST00000495497 TREML2Q5T2D2 321 aa23.05■■□□□ 1.28
HDAC4-212ENST00000495497 OTUD7BQ6GQQ9 843 aa23.05■■□□□ 1.28
HDAC4-212ENST00000495497 FASTKD5Q7L8L6 764 aaKnown RBP23.05■■□□□ 1.28
HDAC4-212ENST00000495497 STAG1Q8WVM7 1258 aa23.05■■□□□ 1.28
HDAC4-212ENST00000495497 MAP4K1Q92918 833 aa23.05■■□□□ 1.28
HDAC4-212ENST00000495497 ANO2Q9NQ90 1003 aa23.05■■□□□ 1.28
HDAC4-212ENST00000495497 ORC4O43929 436 aa23.04■■□□□ 1.28
HDAC4-212ENST00000495497 RANBP6O60518 1105 aaKnown RBP23.04■■□□□ 1.28
HDAC4-212ENST00000495497 TSPY3P0CV98 308 aa23.04■■□□□ 1.28
HDAC4-212ENST00000495497 TSPY8P0CW00 308 aa23.04■■□□□ 1.28
HDAC4-212ENST00000495497 EEF2P13639 858 aaKnown RBP23.04■■□□□ 1.28
HDAC4-212ENST00000495497 MFSD6Q6ZSS7 791 aa23.04■■□□□ 1.28
HDAC4-212ENST00000495497 ANKRD23Q86SG2 305 aa23.04■■□□□ 1.28
HDAC4-212ENST00000495497 FEZ1Q99689 392 aa23.04■■□□□ 1.28
HDAC4-212ENST00000495497 EMILIN3Q9NT22 766 aa23.04■■□□□ 1.28
HDAC4-212ENST00000495497 SAGE1Q9NXZ1 904 aa23.04■■□□□ 1.28
HDAC4-212ENST00000495497 RBM8AQ9Y5S9 174 aaKnown RBP23.04■■□□□ 1.28
HDAC4-212ENST00000495497 U3KPZ7 1027 aaPredicted RBP23.04■■□□□ 1.28
HDAC4-212ENST00000495497 NEDD4P46934 1319 aa23.04■■□□□ 1.28
HDAC4-212ENST00000495497 IGKV6D-41A0A0C4DH26 115 aa23.03■■□□□ 1.28
HDAC4-212ENST00000495497 PDHXO00330 501 aa23.03■■□□□ 1.28
HDAC4-212ENST00000495497 HSPA8P11142 646 aaKnown RBP23.03■■□□□ 1.28
HDAC4-212ENST00000495497 NEDD1Q8NHV4 660 aa23.03■■□□□ 1.28
HDAC4-212ENST00000495497 KANSL2Q9H9L4 492 aa23.03■■□□□ 1.28
HDAC4-212ENST00000495497 TAF6LQ9Y6J9 622 aa23.03■■□□□ 1.28
HDAC4-212ENST00000495497 MYH8P13535 1937 aa23.02■■□□□ 1.28
HDAC4-212ENST00000495497 TSPY2A6NKD2 308 aa23.02■■□□□ 1.28
HDAC4-212ENST00000495497 C19orf81C9J6K1 198 aa23.02■■□□□ 1.28
HDAC4-212ENST00000495497 CA12O43570 354 aa23.02■■□□□ 1.28
HDAC4-212ENST00000495497 ALDH1A1P00352 501 aa23.02■■□□□ 1.28
HDAC4-212ENST00000495497 CYP21A2P08686 494 aa23.02■■□□□ 1.28
HDAC4-212ENST00000495497 TAF1CQ15572 869 aaPredicted RBP23.02■■□□□ 1.28
HDAC4-212ENST00000495497 USP17L2Q6R6M4 530 aa23.02■■□□□ 1.28
HDAC4-212ENST00000495497 TMOD4Q9NZQ9 345 aa23.02■■□□□ 1.28
HDAC4-212ENST00000495497 NMT2O60551 498 aa23.01■■□□□ 1.27
HDAC4-212ENST00000495497 CRHR2Q13324 411 aa23.01■■□□□ 1.27
HDAC4-212ENST00000495497 PROCA1Q8NCQ7 364 aaPredicted RBP23.01■■□□□ 1.27
HDAC4-212ENST00000495497 CEP95Q96GE4 821 aa23.01■■□□□ 1.27
HDAC4-212ENST00000495497 KIAA1683Q9H0B3 1180 aa23.01■■□□□ 1.27
HDAC4-212ENST00000495497 RNF41Q9H4P4 317 aaPredicted RBP23.01■■□□□ 1.27
HDAC4-212ENST00000495497 ARHGEF10LQ9HCE6 1279 aa23.01■■□□□ 1.27
HDAC4-212ENST00000495497 AGTPBP1Q9UPW5 1226 aa23.01■■□□□ 1.27
HDAC4-212ENST00000495497 CYP2C8P10632 490 aa23■■□□□ 1.27
HDAC4-212ENST00000495497 CTCFP49711 727 aaPredicted RBP23■■□□□ 1.27
HDAC4-212ENST00000495497 LBX1P52954 281 aa23■■□□□ 1.27
HDAC4-212ENST00000495497 KIAA1755Q5JYT7 1200 aa23■■□□□ 1.27
HDAC4-212ENST00000495497 IL17RBQ9NRM6 502 aa23■■□□□ 1.27
HDAC4-212ENST00000495497 MTMR4Q9NYA4 1195 aa23■■□□□ 1.27
HDAC4-212ENST00000495497 CLIP2Q9UDT6 1046 aa23■■□□□ 1.27
HDAC4-212ENST00000495497 USP14P54578 494 aa22.99■■□□□ 1.27
HDAC4-212ENST00000495497 TMX2Q9Y320 296 aa22.99■■□□□ 1.27
HDAC4-212ENST00000495497 PTPRFP10586 1907 aa22.99■■□□□ 1.27
HDAC4-212ENST00000495497 PLIN4Q96Q06 1357 aa22.99■■□□□ 1.27
HDAC4-212ENST00000495497 B4E1Z4 1266 aa22.98■■□□□ 1.27
HDAC4-212ENST00000495497 C12orf42Q96LP6 360 aa22.98■■□□□ 1.27
HDAC4-212ENST00000495497 CFHR5Q9BXR6 569 aa22.98■■□□□ 1.27
HDAC4-212ENST00000495497 ZFYVE28Q9HCC9 887 aa22.98■■□□□ 1.27
HDAC4-212ENST00000495497 ZCCHC17Q9NP64 241 aaKnown RBP22.98■■□□□ 1.27
HDAC4-212ENST00000495497 NYAP2Q9P242 653 aa22.98■■□□□ 1.27
HDAC4-212ENST00000495497 GREB1LQ9C091 1923 aaPredicted RBP22.98■■□□□ 1.27
HDAC4-212ENST00000495497 KDM4AO75164 1064 aa22.97■■□□□ 1.27
HDAC4-212ENST00000495497 PCP11498 1178 aaKnown RBP22.97■■□□□ 1.27
HDAC4-212ENST00000495497 STOX1Q6ZVD7 989 aa22.97■■□□□ 1.27
HDAC4-212ENST00000495497 SPICE1Q8N0Z3 855 aa22.97■■□□□ 1.27
HDAC4-212ENST00000495497 ZKSCAN3Q9BRR0 538 aa22.97■■□□□ 1.27
HDAC4-212ENST00000495497 E7EWF7 191 aa22.96■■□□□ 1.27
HDAC4-212ENST00000495497 SLC27A2O14975 620 aa22.96■■□□□ 1.27
HDAC4-212ENST00000495497 RAD21O60216 631 aa22.96■■□□□ 1.27
HDAC4-212ENST00000495497 TTLL1O95922 423 aa22.96■■□□□ 1.27
HDAC4-212ENST00000495497 VCAM1P19320 739 aa22.96■■□□□ 1.27
HDAC4-212ENST00000495497 NECTIN1Q15223 517 aa22.96■■□□□ 1.27
HDAC4-212ENST00000495497 CREB3L3Q68CJ9 461 aa22.96■■□□□ 1.27
HDAC4-212ENST00000495497 ESR2Q92731 530 aa22.96■■□□□ 1.27
HDAC4-212ENST00000495497 SH2D4AQ9H788 454 aa22.96■■□□□ 1.27
HDAC4-212ENST00000495497 VCPKMTQ9H867 229 aa22.96■■□□□ 1.27
HDAC4-212ENST00000495497 SLC45A1Q9Y2W3 748 aa22.96■■□□□ 1.27
HDAC4-212ENST00000495497 LAMA4Q16363 1823 aa22.96■■□□□ 1.27
HDAC4-212ENST00000495497 LOC285556D6RIA3 1793 aa22.95■■□□□ 1.26
HDAC4-212ENST00000495497 LRRC47Q8N1G4 583 aaKnown RBP22.95■■□□□ 1.26
HDAC4-212ENST00000495497 PARK7Q99497 189 aaKnown RBP22.95■■□□□ 1.26
HDAC4-212ENST00000495497 ASCC2Q9H1I8 757 aaPredicted RBP22.95■■□□□ 1.26
HDAC4-212ENST00000495497 RPAP3Q9H6T3 665 aaPredicted RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms