RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 PSMD2Q13200 908 aa7.39□□□□□ -1.23
SMC4-224ENST00000494612 MFSD4AQ8N468 514 aa7.39□□□□□ -1.23
SMC4-224ENST00000494612 MIPEPQ99797 713 aa7.39□□□□□ -1.23
SMC4-224ENST00000494612 JAG2Q9Y219 1238 aa7.39□□□□□ -1.23
SMC4-224ENST00000494612 FGD1P98174 961 aa7.38□□□□□ -1.23
SMC4-224ENST00000494612 CDKAL1Q5VV42 579 aa7.38□□□□□ -1.23
SMC4-224ENST00000494612 LETMD1Q6P1Q0 360 aa7.38□□□□□ -1.23
SMC4-224ENST00000494612 ATG14Q6ZNE5 492 aa7.38□□□□□ -1.23
SMC4-224ENST00000494612 MRS2Q9HD23 443 aa7.38□□□□□ -1.23
SMC4-224ENST00000494612 TPX2Q9ULW0 747 aaKnown RBP7.38□□□□□ -1.23
SMC4-224ENST00000494612 GFRA2O00451 464 aa7.37□□□□□ -1.23
SMC4-224ENST00000494612 CST3P01034 146 aaPredicted RBP7.37□□□□□ -1.23
SMC4-224ENST00000494612 RANGAP1P46060 587 aaPredicted RBP7.37□□□□□ -1.23
SMC4-224ENST00000494612 TSNAXIP1Q2TAA8 658 aa7.37□□□□□ -1.23
SMC4-224ENST00000494612 THAP5Q7Z6K1 395 aa7.37□□□□□ -1.23
SMC4-224ENST00000494612 HID1Q8IV36 788 aa7.37□□□□□ -1.23
SMC4-224ENST00000494612 CD320Q9NPF0 282 aa7.37□□□□□ -1.23
SMC4-224ENST00000494612 VTI1BQ9UEU0 232 aa7.37□□□□□ -1.23
SMC4-224ENST00000494612 H3BS24 57 aa7.36□□□□□ -1.23
SMC4-224ENST00000494612 ETF1P62495 437 aaKnown RBP7.36□□□□□ -1.23
SMC4-224ENST00000494612 TTBK2Q6IQ55 1244 aa7.36□□□□□ -1.23
SMC4-224ENST00000494612 RELTQ969Z4 430 aa7.36□□□□□ -1.23
SMC4-224ENST00000494612 FRMD6Q96NE9 622 aa7.36□□□□□ -1.23
SMC4-224ENST00000494612 EPB41L4BQ9H329 900 aa7.36□□□□□ -1.23
SMC4-224ENST00000494612 DCP1AQ9NPI6 582 aaPredicted RBP7.36□□□□□ -1.23
SMC4-224ENST00000494612 NUAK1O60285 661 aa7.35□□□□□ -1.23
SMC4-224ENST00000494612 HOXA5P20719 270 aa7.35□□□□□ -1.23
SMC4-224ENST00000494612 RPS26P62854 115 aaKnown RBP7.35□□□□□ -1.23
SMC4-224ENST00000494612 DAB2P98082 770 aa7.35□□□□□ -1.23
SMC4-224ENST00000494612 WIPI1Q5MNZ9 446 aaPredicted RBP7.35□□□□□ -1.23
SMC4-224ENST00000494612 PRAMEF13Q5VWM6 474 aa7.35□□□□□ -1.23
SMC4-224ENST00000494612 ZNF746Q6NUN9 644 aaPredicted RBP7.35□□□□□ -1.23
SMC4-224ENST00000494612 TACC3Q9Y6A5 838 aa7.35□□□□□ -1.23
SMC4-224ENST00000494612 SORBS3O60504 671 aa7.34□□□□□ -1.23
SMC4-224ENST00000494612 CBX7O95931 251 aa7.34□□□□□ -1.23
SMC4-224ENST00000494612 GNA15P30679 374 aa7.34□□□□□ -1.23
SMC4-224ENST00000494612 GRK4P32298 578 aa7.34□□□□□ -1.23
SMC4-224ENST00000494612 UBE2FQ969M7 185 aa7.34□□□□□ -1.23
SMC4-224ENST00000494612 CCDC120Q96HB5 630 aa7.34□□□□□ -1.23
SMC4-224ENST00000494612 MED14OSP0DP75 135 aa7.33□□□□□ -1.24
SMC4-224ENST00000494612 KIR3DL1P43629 444 aa7.33□□□□□ -1.24
SMC4-224ENST00000494612 TNK2Q07912 1038 aa7.33□□□□□ -1.24
SMC4-224ENST00000494612 KRTAP5-3Q6L8H2 238 aa7.33□□□□□ -1.24
SMC4-224ENST00000494612 TMC4Q7Z404 712 aa7.33□□□□□ -1.24
SMC4-224ENST00000494612 COX4I2Q96KJ9 171 aa7.33□□□□□ -1.24
SMC4-224ENST00000494612 ALPK1Q96QP1 1244 aa7.33□□□□□ -1.24
SMC4-224ENST00000494612 BACH2Q9BYV9 841 aa7.33□□□□□ -1.24
SMC4-224ENST00000494612 BCL11AQ9H165 835 aa7.33□□□□□ -1.24
SMC4-224ENST00000494612 TTF2Q9UNY4 1162 aaKnown RBP7.33□□□□□ -1.24
SMC4-224ENST00000494612 PCDHB5Q9Y5E4 795 aa7.33□□□□□ -1.24
SMC4-224ENST00000494612 GLDCP23378 1020 aa7.32□□□□□ -1.24
SMC4-224ENST00000494612 EIF4BP23588 611 aaKnown RBP7.32□□□□□ -1.24
SMC4-224ENST00000494612 CDH24Q86UP0 819 aa7.32□□□□□ -1.24
SMC4-224ENST00000494612 MRPL41Q8IXM3 137 aaKnown RBP7.32□□□□□ -1.24
SMC4-224ENST00000494612 TMEM87AQ8NBN3 555 aa7.32□□□□□ -1.24
SMC4-224ENST00000494612 C20orf173Q96LM9 149 aa7.32□□□□□ -1.24
SMC4-224ENST00000494612 ZSWIM5Q9P217 1185 aa7.32□□□□□ -1.24
SMC4-224ENST00000494612 SMG5Q9UPR3 1016 aaKnown RBP7.32□□□□□ -1.24
SMC4-224ENST00000494612 AK5Q9Y6K8 562 aa7.32□□□□□ -1.24
SMC4-224ENST00000494612 ETV2O00321 342 aaPredicted RBP7.31□□□□□ -1.24
SMC4-224ENST00000494612 ESR1P03372 595 aa7.31□□□□□ -1.24
SMC4-224ENST00000494612 CYP7A1P22680 504 aa7.31□□□□□ -1.24
SMC4-224ENST00000494612 LINC00310P59036 64 aa7.31□□□□□ -1.24
SMC4-224ENST00000494612 SEPT6Q14141 434 aa7.31□□□□□ -1.24
SMC4-224ENST00000494612 MRPL58Q14197 206 aaKnown RBP7.31□□□□□ -1.24
SMC4-224ENST00000494612 C9orf131Q5VYM1 1079 aa7.31□□□□□ -1.24
SMC4-224ENST00000494612 AGMOQ6ZNB7 445 aa7.31□□□□□ -1.24
SMC4-224ENST00000494612 DBX2Q6ZNG2 339 aa7.31□□□□□ -1.24
SMC4-224ENST00000494612 XAGE3Q8WTP9 111 aa7.31□□□□□ -1.24
SMC4-224ENST00000494612 KCNN1Q92952 543 aa7.31□□□□□ -1.24
SMC4-224ENST00000494612 TJP2Q9UDY2 1190 aa7.31□□□□□ -1.24
SMC4-224ENST00000494612 RECKO95980 971 aa7.3□□□□□ -1.24
SMC4-224ENST00000494612 RAC2P15153 192 aa7.3□□□□□ -1.24
SMC4-224ENST00000494612 TMPRSS7Q7RTY8 843 aa7.3□□□□□ -1.24
SMC4-224ENST00000494612 PIWIL2Q8TC59 973 aaKnown RBP7.3□□□□□ -1.24
SMC4-224ENST00000494612 SLC26A8Q96RN1 970 aa7.3□□□□□ -1.24
SMC4-224ENST00000494612 KCNK12Q9HB15 430 aa7.3□□□□□ -1.24
SMC4-224ENST00000494612 PARD6AQ9NPB6 346 aa7.3□□□□□ -1.24
SMC4-224ENST00000494612 SLAMF8Q9P0V8 285 aa7.3□□□□□ -1.24
SMC4-224ENST00000494612 DNAJC25-GNG10A0A024R161 153 aa7.29□□□□□ -1.24
SMC4-224ENST00000494612 CTSHP09668 335 aa7.29□□□□□ -1.24
SMC4-224ENST00000494612 CCDC85BQ15834 202 aaPredicted RBP7.29□□□□□ -1.24
SMC4-224ENST00000494612 RALGPS1Q5JS13 557 aa7.29□□□□□ -1.24
SMC4-224ENST00000494612 SLC6A19Q695T7 634 aa7.29□□□□□ -1.24
SMC4-224ENST00000494612 TTC6Q86TZ1 520 aa7.29□□□□□ -1.24
SMC4-224ENST00000494612 DNAJB8Q8NHS0 232 aa7.29□□□□□ -1.24
SMC4-224ENST00000494612 ABHD4Q8TB40 342 aa7.29□□□□□ -1.24
SMC4-224ENST00000494612 Q96M66 194 aa7.29□□□□□ -1.24
SMC4-224ENST00000494612 IRF2BPLQ9H1B7 796 aa7.29□□□□□ -1.24
SMC4-224ENST00000494612 DUSP15Q9H1R2 295 aaPredicted RBP7.29□□□□□ -1.24
SMC4-224ENST00000494612 ZCCHC4Q9H5U6 513 aa7.29□□□□□ -1.24
SMC4-224ENST00000494612 WASH4PA8MWX3 477 aa7.28□□□□□ -1.24
SMC4-224ENST00000494612 GAB4Q2WGN9 574 aa7.28□□□□□ -1.24
SMC4-224ENST00000494612 LDLRAD1Q5T700 205 aa7.28□□□□□ -1.24
SMC4-224ENST00000494612 MEI1Q5TIA1 1274 aa7.28□□□□□ -1.24
SMC4-224ENST00000494612 TMEM87BQ96K49 555 aa7.28□□□□□ -1.24
SMC4-224ENST00000494612 DPH2Q9BQC3 489 aaPredicted RBP7.28□□□□□ -1.24
SMC4-224ENST00000494612 FOXD2O60548 495 aaPredicted RBP7.27□□□□□ -1.25
SMC4-224ENST00000494612 PGRP06401 933 aa7.27□□□□□ -1.25
SMC4-224ENST00000494612 LIG3P49916 1009 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms