RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 PAWRQ96IZ0 340 aaKnown RBP28.97■■■□□ 2.23
TTC3-224ENST00000494243 DNAJC2Q99543 621 aaKnown RBP28.97■■■□□ 2.23
TTC3-224ENST00000494243 FEZ1Q99689 392 aa28.97■■■□□ 2.23
TTC3-224ENST00000494243 NUDT12Q9BQG2 462 aa28.97■■■□□ 2.23
TTC3-224ENST00000494243 PAGR1Q9BTK6 254 aa28.97■■■□□ 2.23
TTC3-224ENST00000494243 CRNKL1Q9BZJ0 848 aaKnown RBP28.97■■■□□ 2.23
TTC3-224ENST00000494243 HMX1Q9NP08 348 aaPredicted RBP28.97■■■□□ 2.23
TTC3-224ENST00000494243 USP17L15C9J2P7 530 aa28.96■■■□□ 2.23
TTC3-224ENST00000494243 USP17L13C9JLJ4 530 aa28.96■■■□□ 2.23
TTC3-224ENST00000494243 USP17L11C9JVI0 530 aa28.96■■■□□ 2.23
TTC3-224ENST00000494243 USP17L18D6R9N7 530 aa28.96■■■□□ 2.23
TTC3-224ENST00000494243 USP17L22D6RA61 530 aa28.96■■■□□ 2.23
TTC3-224ENST00000494243 USP17L17D6RBQ6 530 aa28.96■■■□□ 2.23
TTC3-224ENST00000494243 USP17L19D6RCP7 530 aa28.96■■■□□ 2.23
TTC3-224ENST00000494243 USP17L20D6RJB6 530 aa28.96■■■□□ 2.23
TTC3-224ENST00000494243 POLR3DP05423 398 aaPredicted RBP28.96■■■□□ 2.23
TTC3-224ENST00000494243 XRCC5P13010 732 aaKnown RBP28.96■■■□□ 2.23
TTC3-224ENST00000494243 USP17L24Q0WX57 530 aa28.96■■■□□ 2.23
TTC3-224ENST00000494243 NR2E3Q9Y5X4 410 aa28.96■■■□□ 2.23
TTC3-224ENST00000494243 CNMDO75829 334 aa28.95■■■□□ 2.22
TTC3-224ENST00000494243 MAP3K21Q5TCX8 1036 aa28.95■■■□□ 2.22
TTC3-224ENST00000494243 DIS3LQ8TF46 1054 aaKnown RBP28.95■■■□□ 2.22
TTC3-224ENST00000494243 SOCS4Q8WXH5 440 aa28.95■■■□□ 2.22
TTC3-224ENST00000494243 PRO3102Q9H379 93 aa28.95■■■□□ 2.22
TTC3-224ENST00000494243 CABP5Q9NP86 173 aa28.95■■■□□ 2.22
TTC3-224ENST00000494243 RBM27Q9P2N5 1060 aaKnown RBP28.95■■■□□ 2.22
TTC3-224ENST00000494243 RCAN3Q9UKA8 241 aa28.95■■■□□ 2.22
TTC3-224ENST00000494243 USP14P54578 494 aa28.94■■■□□ 2.22
TTC3-224ENST00000494243 MORN1Q5T089 497 aa28.94■■■□□ 2.22
TTC3-224ENST00000494243 CATSPERGQ6ZRH7 1159 aa28.94■■■□□ 2.22
TTC3-224ENST00000494243 GPR142Q7Z601 462 aa28.94■■■□□ 2.22
TTC3-224ENST00000494243 LCORLQ8N3X6 602 aa28.94■■■□□ 2.22
TTC3-224ENST00000494243 SDR42E1Q8WUS8 393 aa28.94■■■□□ 2.22
TTC3-224ENST00000494243 BCL11AQ9H165 835 aa28.94■■■□□ 2.22
TTC3-224ENST00000494243 DCP1AQ9NPI6 582 aaPredicted RBP28.94■■■□□ 2.22
TTC3-224ENST00000494243 MCM9Q9NXL9 1143 aa28.94■■■□□ 2.22
TTC3-224ENST00000494243 NAV1Q8NEY1 1877 aa28.93■■■□□ 2.22
TTC3-224ENST00000494243 VCAM1P19320 739 aa28.93■■■□□ 2.22
TTC3-224ENST00000494243 SLFNL1Q499Z3 407 aa28.93■■■□□ 2.22
TTC3-224ENST00000494243 RABGAP1Q9Y3P9 1069 aa28.93■■■□□ 2.22
TTC3-224ENST00000494243 ATP5JP18859 108 aa28.92■■■□□ 2.22
TTC3-224ENST00000494243 MNX1P50219 401 aaPredicted RBP28.92■■■□□ 2.22
TTC3-224ENST00000494243 SEPT2Q15019 361 aa28.92■■■□□ 2.22
TTC3-224ENST00000494243 NECAB2Q7Z6G3 386 aa28.92■■■□□ 2.22
TTC3-224ENST00000494243 PLEKHH3Q7Z736 793 aa28.92■■■□□ 2.22
TTC3-224ENST00000494243 ANKLE1Q8NAG6 615 aa28.92■■■□□ 2.22
TTC3-224ENST00000494243 BOLA2Q9H3K6 86 aa28.92■■■□□ 2.22
TTC3-224ENST00000494243 TRIOBPQ9H2D6 2365 aa28.92■■■□□ 2.22
TTC3-224ENST00000494243 EVI5O60447 810 aa28.91■■■□□ 2.22
TTC3-224ENST00000494243 CYP2D6P10635 497 aa28.91■■■□□ 2.22
TTC3-224ENST00000494243 PDE3AQ14432 1141 aa28.91■■■□□ 2.22
TTC3-224ENST00000494243 CCAR1Q8IX12 1150 aaKnown RBP28.91■■■□□ 2.22
TTC3-224ENST00000494243 CHMP4BQ9H444 224 aaKnown RBP28.91■■■□□ 2.22
TTC3-224ENST00000494243 ARMT1Q9H993 441 aa28.91■■■□□ 2.22
TTC3-224ENST00000494243 PAG1Q9NWQ8 432 aa28.91■■■□□ 2.22
TTC3-224ENST00000494243 PRKAR2AP13861 404 aaKnown RBP28.9■■■□□ 2.22
TTC3-224ENST00000494243 ADD2P35612 726 aa28.9■■■□□ 2.22
TTC3-224ENST00000494243 CCL14Q16627 93 aa28.9■■■□□ 2.22
TTC3-224ENST00000494243 C20orf194Q5TEA3 1177 aa28.9■■■□□ 2.22
TTC3-224ENST00000494243 LBX2Q6XYB7 198 aa28.9■■■□□ 2.22
TTC3-224ENST00000494243 TRMT44Q8IYL2 757 aaKnown RBP28.9■■■□□ 2.22
TTC3-224ENST00000494243 OGDHLQ9ULD0 1010 aa28.9■■■□□ 2.22
TTC3-224ENST00000494243 A0A1W2PRG0 241 aa28.89■■■□□ 2.22
TTC3-224ENST00000494243 HAUS7Q99871 368 aa28.89■■■□□ 2.22
TTC3-224ENST00000494243 BTBD7Q9P203 1132 aa28.89■■■□□ 2.22
TTC3-224ENST00000494243 ALPK3Q96L96 1907 aa28.88■■■□□ 2.21
TTC3-224ENST00000494243 PRKAB2O43741 272 aa28.88■■■□□ 2.21
TTC3-224ENST00000494243 ZKSCAN1P17029 563 aaPredicted RBP28.88■■■□□ 2.21
TTC3-224ENST00000494243 RGS2P41220 211 aa28.88■■■□□ 2.21
TTC3-224ENST00000494243 CACNB2Q08289 660 aaPredicted RBP28.88■■■□□ 2.21
TTC3-224ENST00000494243 SLC44A5Q8NCS7 719 aa28.88■■■□□ 2.21
TTC3-224ENST00000494243 RPAP3Q9H6T3 665 aaPredicted RBP28.88■■■□□ 2.21
TTC3-224ENST00000494243 CHGBP05060 677 aa28.87■■■□□ 2.21
TTC3-224ENST00000494243 SPDYE16A6NNV3 312 aaPredicted RBP28.86■■■□□ 2.21
TTC3-224ENST00000494243 MPHOSPH10O00566 681 aaKnown RBP28.86■■■□□ 2.21
TTC3-224ENST00000494243 MBD4O95243 580 aa28.86■■■□□ 2.21
TTC3-224ENST00000494243 CCNA1P78396 465 aa28.86■■■□□ 2.21
TTC3-224ENST00000494243 MAP2K5Q13163 448 aa28.86■■■□□ 2.21
TTC3-224ENST00000494243 DYNLL2Q96FJ2 89 aa28.86■■■□□ 2.21
TTC3-224ENST00000494243 APBA2Q99767 749 aa28.86■■■□□ 2.21
TTC3-224ENST00000494243 NBPF3Q9H094 633 aa28.86■■■□□ 2.21
TTC3-224ENST00000494243 SMIM22K7EJ46 135 aa28.85■■■□□ 2.21
TTC3-224ENST00000494243 ATP8A2Q9NTI2 1148 aa28.85■■■□□ 2.21
TTC3-224ENST00000494243 SWAP70Q9UH65 585 aa28.85■■■□□ 2.21
TTC3-224ENST00000494243 CCND3P30281 292 aaPredicted RBP28.84■■■□□ 2.21
TTC3-224ENST00000494243 KIAA1755Q5JYT7 1200 aa28.84■■■□□ 2.21
TTC3-224ENST00000494243 SIAH1Q8IUQ4 282 aa28.84■■■□□ 2.21
TTC3-224ENST00000494243 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.84■■■□□ 2.219e-9■□□□□ 10.8
TTC3-224ENST00000494243 SLC15A5A6NIM6 579 aa28.83■■■□□ 2.21
TTC3-224ENST00000494243 SMARCA5O60264 1052 aaPredicted RBP28.83■■■□□ 2.21
TTC3-224ENST00000494243 PTPREP23469 700 aa28.83■■■□□ 2.21
TTC3-224ENST00000494243 LHX8Q68G74 356 aa28.83■■■□□ 2.21
TTC3-224ENST00000494243 TMEM179Q6ZVK1 233 aa28.83■■■□□ 2.21
TTC3-224ENST00000494243 LRRCC1Q9C099 1032 aa28.83■■■□□ 2.21
TTC3-224ENST00000494243 CWC22Q9HCG8 908 aaKnown RBP28.83■■■□□ 2.21
TTC3-224ENST00000494243 FLRT1Q9NZU1 646 aa28.83■■■□□ 2.21
TTC3-224ENST00000494243 RANBP2P49792 3224 aaKnown RBP28.82■■■□□ 2.2
TTC3-224ENST00000494243 GLRX3O76003 335 aaKnown RBP28.82■■■□□ 2.2
TTC3-224ENST00000494243 UBE3CQ15386 1083 aa28.82■■■□□ 2.2
TTC3-224ENST00000494243 C11orf49Q9H6J7 331 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms