RNA–Protein interactions for RNA: ENST00000493335.5

SMTN-219, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-219ENST00000493335 TRIM75PA6NK02 468 aa16.73■□□□□ 0.27
SMTN-219ENST00000493335 RNF225M0QZC1 329 aaPredicted RBP16.73■□□□□ 0.27
SMTN-219ENST00000493335 FKBP15Q5T1M5 1219 aa16.73■□□□□ 0.27
SMTN-219ENST00000493335 RASSF8Q8NHQ8 419 aa16.73■□□□□ 0.27
SMTN-219ENST00000493335 UBAC1Q9BSL1 405 aa16.73■□□□□ 0.27
SMTN-219ENST00000493335 ADD3Q9UEY8 706 aaKnown RBP16.73■□□□□ 0.27
SMTN-219ENST00000493335 CEP131Q9UPN4 1083 aa16.73■□□□□ 0.27
SMTN-219ENST00000493335 KANK3Q6NY19 840 aa16.73■□□□□ 0.27
SMTN-219ENST00000493335 CAGE1Q8TC20 777 aa16.73■□□□□ 0.27
SMTN-219ENST00000493335 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.73■□□□□ 0.27
SMTN-219ENST00000493335 CHP1Q99653 195 aa16.73■□□□□ 0.27
SMTN-219ENST00000493335 FAM237AA0A1B0GTK4 181 aa16.72■□□□□ 0.27
SMTN-219ENST00000493335 IFNAR1P17181 557 aa16.72■□□□□ 0.27
SMTN-219ENST00000493335 SARSP49591 514 aaKnown RBP16.72■□□□□ 0.27
SMTN-219ENST00000493335 ERVK-24P63145 666 aa16.72■□□□□ 0.27
SMTN-219ENST00000493335 PAGE5Q96GU1 130 aa16.72■□□□□ 0.27
SMTN-219ENST00000493335 STRBPQ96SI9 672 aaKnown RBP16.72■□□□□ 0.27
SMTN-219ENST00000493335 EPB41L4AQ9HCS5 686 aaPredicted RBP16.72■□□□□ 0.27
SMTN-219ENST00000493335 MYO6Q9UM54 1294 aa16.72■□□□□ 0.27
SMTN-219ENST00000493335 SRPRBQ9Y5M8 271 aaKnown RBP16.72■□□□□ 0.27
SMTN-219ENST00000493335 POTEB2H3BUK9 544 aa16.72■□□□□ 0.27
SMTN-219ENST00000493335 MRPS25P82663 173 aaKnown RBP16.72■□□□□ 0.27
SMTN-219ENST00000493335 NOM1Q5C9Z4 860 aaKnown RBP16.72■□□□□ 0.27
SMTN-219ENST00000493335 EARS2Q5JPH6 523 aaKnown RBP16.72■□□□□ 0.27
SMTN-219ENST00000493335 TOM1L2Q6ZVM7 507 aa16.72■□□□□ 0.27
SMTN-219ENST00000493335 CCDC148Q8NFR7 591 aa16.72■□□□□ 0.27
SMTN-219ENST00000493335 CLGNO14967 610 aa16.71■□□□□ 0.27
SMTN-219ENST00000493335 ERCC5P28715 1186 aaPredicted RBP16.71■□□□□ 0.27
SMTN-219ENST00000493335 UBXN1Q04323 297 aa16.71■□□□□ 0.27
SMTN-219ENST00000493335 TTF2Q9UNY4 1162 aaKnown RBP16.71■□□□□ 0.27
SMTN-219ENST00000493335 SLC4A4Q9Y6R1 1079 aa16.71■□□□□ 0.27
SMTN-219ENST00000493335 SMIM22K7EJ46 135 aa16.71■□□□□ 0.27
SMTN-219ENST00000493335 RNF40O75150 1001 aa16.71■□□□□ 0.27
SMTN-219ENST00000493335 IVLP07476 585 aa16.71■□□□□ 0.27
SMTN-219ENST00000493335 PIP4K2BP78356 416 aa16.71■□□□□ 0.27
SMTN-219ENST00000493335 DPYDQ12882 1025 aa16.71■□□□□ 0.27
SMTN-219ENST00000493335 TCIRG1Q13488 830 aa16.71■□□□□ 0.27
SMTN-219ENST00000493335 KRT31Q15323 416 aa16.71■□□□□ 0.27
SMTN-219ENST00000493335 AKNAD1Q5T1N1 836 aa16.71■□□□□ 0.27
SMTN-219ENST00000493335 ICE2Q659A1 982 aa16.71■□□□□ 0.27
SMTN-219ENST00000493335 KIF6Q6ZMV9 814 aa16.71■□□□□ 0.27
SMTN-219ENST00000493335 RASGRP2Q7LDG7 609 aa16.71■□□□□ 0.27
SMTN-219ENST00000493335 TRIML1Q8N9V2 468 aa16.71■□□□□ 0.27
SMTN-219ENST00000493335 DEXIO95424 95 aa16.7■□□□□ 0.26
SMTN-219ENST00000493335 TTF1Q15361 905 aaPredicted RBP16.7■□□□□ 0.26
SMTN-219ENST00000493335 CTAGE1Q96RT6 745 aa16.7■□□□□ 0.26
SMTN-219ENST00000493335 NAA15Q9BXJ9 866 aaKnown RBP16.7■□□□□ 0.26
SMTN-219ENST00000493335 ACBD3Q9H3P7 528 aa16.7■□□□□ 0.26
SMTN-219ENST00000493335 TACC3Q9Y6A5 838 aa16.7■□□□□ 0.26
SMTN-219ENST00000493335 C5P01031 1676 aa16.7■□□□□ 0.26
SMTN-219ENST00000493335 ANKRD18BA2A2Z9 1011 aa16.7■□□□□ 0.26
SMTN-219ENST00000493335 WNT7AO00755 349 aa16.7■□□□□ 0.26
SMTN-219ENST00000493335 ANKRD20A12PQ8NF67 263 aa16.7■□□□□ 0.26
SMTN-219ENST00000493335 PCMTD1Q96MG8 357 aaPredicted RBP16.7■□□□□ 0.26
SMTN-219ENST00000493335 PLIN2Q99541 437 aa16.7■□□□□ 0.26
SMTN-219ENST00000493335 GBP3Q9H0R5 595 aa16.7■□□□□ 0.26
SMTN-219ENST00000493335 ABHD10Q9NUJ1 306 aa16.7■□□□□ 0.26
SMTN-219ENST00000493335 KCNG1Q9UIX4 513 aa16.7■□□□□ 0.26
SMTN-219ENST00000493335 V9GY48 417 aaPredicted RBP16.7■□□□□ 0.26
SMTN-219ENST00000493335 ARHGAP23Q9P227 1491 aa16.7■□□□□ 0.26
SMTN-219ENST00000493335 DNAJC21Q5F1R6 531 aaKnown RBP16.69■□□□□ 0.26
SMTN-219ENST00000493335 APTXQ7Z2E3 356 aaKnown RBP16.69■□□□□ 0.26
SMTN-219ENST00000493335 SGMS1Q86VZ5 419 aa16.69■□□□□ 0.26
SMTN-219ENST00000493335 CRACR2BQ8N4Y2 399 aaPredicted RBP16.69■□□□□ 0.26
SMTN-219ENST00000493335 FOXP1Q9H334 677 aaPredicted RBP16.69■□□□□ 0.26
SMTN-219ENST00000493335 STRN4Q9NRL3 753 aa16.69■□□□□ 0.26
SMTN-219ENST00000493335 ATG3Q9NT62 314 aa16.69■□□□□ 0.26
SMTN-219ENST00000493335 EIF3CLB5ME19 914 aaKnown RBP16.69■□□□□ 0.26
SMTN-219ENST00000493335 ZNF654Q8IZM8 581 aa16.69■□□□□ 0.26
SMTN-219ENST00000493335 FANCBQ8NB91 859 aa16.69■□□□□ 0.26
SMTN-219ENST00000493335 DRC1Q96MC2 740 aa16.69■□□□□ 0.26
SMTN-219ENST00000493335 EIF3CQ99613 913 aaKnown RBP16.69■□□□□ 0.26
SMTN-219ENST00000493335 ABCF2Q9UG63 623 aa16.69■□□□□ 0.26
SMTN-219ENST00000493335 WDR19Q8NEZ3 1342 aa16.69■□□□□ 0.26
SMTN-219ENST00000493335 PATL2C9JE40 543 aaKnown RBP16.69■□□□□ 0.26
SMTN-219ENST00000493335 LIFRP42702 1097 aa16.69■□□□□ 0.26
SMTN-219ENST00000493335 TSR1Q2NL82 804 aaKnown RBP16.69■□□□□ 0.26
SMTN-219ENST00000493335 NT5DC1Q5TFE4 455 aa16.69■□□□□ 0.26
SMTN-219ENST00000493335 TMTC1Q8IUR5 882 aa16.69■□□□□ 0.26
SMTN-219ENST00000493335 TTLL11Q8NHH1 800 aa16.69■□□□□ 0.26
SMTN-219ENST00000493335 SDR42E1Q8WUS8 393 aa16.69■□□□□ 0.26
SMTN-219ENST00000493335 HNRNPLLQ8WVV9 542 aaKnown RBP16.69■□□□□ 0.26
SMTN-219ENST00000493335 SMARCC1Q92922 1105 aaPredicted RBP16.69■□□□□ 0.26
SMTN-219ENST00000493335 TRMT112Q9UI30 125 aaKnown RBP16.69■□□□□ 0.26
SMTN-219ENST00000493335 AFDNP55196 1824 aaKnown RBP16.69■□□□□ 0.26
SMTN-219ENST00000493335 MATR3P43243 847 aaKnown RBP eCLIP16.68■□□□□ 0.26
SMTN-219ENST00000493335 MAP3K12Q12852 859 aa16.68■□□□□ 0.26
SMTN-219ENST00000493335 CCDC122Q5T0U0 273 aa16.68■□□□□ 0.26
SMTN-219ENST00000493335 CTR9Q6PD62 1173 aa16.68■□□□□ 0.26
SMTN-219ENST00000493335 CYP26C1Q6V0L0 522 aa16.68■□□□□ 0.26
SMTN-219ENST00000493335 KIAA1328Q86T90 577 aa16.68■□□□□ 0.26
SMTN-219ENST00000493335 MSANTD4Q8NCY6 345 aa16.68■□□□□ 0.26
SMTN-219ENST00000493335 PSD3Q9NYI0 1048 aa16.68■□□□□ 0.26
SMTN-219ENST00000493335 RAB21Q9UL25 225 aa16.68■□□□□ 0.26
SMTN-219ENST00000493335 MTMR7Q9Y216 660 aa16.68■□□□□ 0.26
SMTN-219ENST00000493335 XBP1P17861 261 aa16.68■□□□□ 0.26
SMTN-219ENST00000493335 MCM7P33993 719 aa16.68■□□□□ 0.26
SMTN-219ENST00000493335 UBE3CQ15386 1083 aa16.68■□□□□ 0.26
SMTN-219ENST00000493335 TTC19Q6DKK2 380 aaPredicted RBP16.68■□□□□ 0.26
SMTN-219ENST00000493335 LCORLQ8N3X6 602 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms