RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 C12orf42Q96LP6 360 aa16.75■□□□□ 0.27
SAMM50-204ENST00000493161 ANTXR1Q9H6X2 564 aa16.75■□□□□ 0.27
SAMM50-204ENST00000493161 MTMR10Q9NXD2 777 aa16.75■□□□□ 0.27
SAMM50-204ENST00000493161 IDH1O75874 414 aaKnown RBP16.74■□□□□ 0.27
SAMM50-204ENST00000493161 MAP2K5Q13163 448 aa16.74■□□□□ 0.27
SAMM50-204ENST00000493161 CATSPERGQ6ZRH7 1159 aa16.74■□□□□ 0.27
SAMM50-204ENST00000493161 MAGEB6Q8N7X4 407 aa16.74■□□□□ 0.27
SAMM50-204ENST00000493161 GTF3C2Q8WUA4 911 aaPredicted RBP16.74■□□□□ 0.27
SAMM50-204ENST00000493161 EDC3Q96F86 508 aaKnown RBP16.74■□□□□ 0.27
SAMM50-204ENST00000493161 BTBD7Q9P203 1132 aa16.74■□□□□ 0.27
SAMM50-204ENST00000493161 RABGAP1Q9Y3P9 1069 aa16.74■□□□□ 0.27
SAMM50-204ENST00000493161 MYH1P12882 1939 aa16.73■□□□□ 0.27
SAMM50-204ENST00000493161 USP17L15C9J2P7 530 aa16.73■□□□□ 0.27
SAMM50-204ENST00000493161 USP17L13C9JLJ4 530 aa16.73■□□□□ 0.27
SAMM50-204ENST00000493161 USP17L11C9JVI0 530 aa16.73■□□□□ 0.27
SAMM50-204ENST00000493161 USP17L18D6R9N7 530 aa16.73■□□□□ 0.27
SAMM50-204ENST00000493161 USP17L22D6RA61 530 aa16.73■□□□□ 0.27
SAMM50-204ENST00000493161 USP17L17D6RBQ6 530 aa16.73■□□□□ 0.27
SAMM50-204ENST00000493161 USP17L19D6RCP7 530 aa16.73■□□□□ 0.27
SAMM50-204ENST00000493161 USP17L20D6RJB6 530 aa16.73■□□□□ 0.27
SAMM50-204ENST00000493161 VCAM1P19320 739 aa16.73■□□□□ 0.27
SAMM50-204ENST00000493161 USP5P45974 858 aa16.73■□□□□ 0.27
SAMM50-204ENST00000493161 EVX2Q03828 476 aa16.73■□□□□ 0.27
SAMM50-204ENST00000493161 USP17L24Q0WX57 530 aa16.73■□□□□ 0.27
SAMM50-204ENST00000493161 RAB3GAP1Q15042 981 aa16.73■□□□□ 0.27
SAMM50-204ENST00000493161 WDR78Q5VTH9 848 aa16.73■□□□□ 0.27
SAMM50-204ENST00000493161 FEZ1Q99689 392 aa16.73■□□□□ 0.27
SAMM50-204ENST00000493161 CWC22Q9HCG8 908 aaKnown RBP16.73■□□□□ 0.27
SAMM50-204ENST00000493161 DNAH12Q6ZR08 3092 aa16.73■□□□□ 0.27
SAMM50-204ENST00000493161 FRMPD3Q5JV73 1810 aa16.73■□□□□ 0.27
SAMM50-204ENST00000493161 PTPREP23469 700 aa16.72■□□□□ 0.27
SAMM50-204ENST00000493161 GUCY1A2P33402 732 aa16.72■□□□□ 0.27
SAMM50-204ENST00000493161 PLCD1P51178 756 aa16.72■□□□□ 0.27
SAMM50-204ENST00000493161 ZKSCAN2Q63HK3 967 aa16.72■□□□□ 0.27
SAMM50-204ENST00000493161 TRPV1Q8NER1 839 aa16.72■□□□□ 0.27
SAMM50-204ENST00000493161 NPLOC4Q8TAT6 608 aa16.72■□□□□ 0.27
SAMM50-204ENST00000493161 SENP6Q9GZR1 1112 aaPredicted RBP16.72■□□□□ 0.27
SAMM50-204ENST00000493161 SERPINB13Q9UIV8 391 aa16.72■□□□□ 0.27
SAMM50-204ENST00000493161 STXBP5LQ9Y2K9 1186 aa16.72■□□□□ 0.27
SAMM50-204ENST00000493161 NOP58Q9Y2X3 529 aaKnown RBP16.72■□□□□ 0.27
SAMM50-204ENST00000493161 SLC15A5A6NIM6 579 aa16.71■□□□□ 0.27
SAMM50-204ENST00000493161 CYP2C19P33261 490 aa16.71■□□□□ 0.27
SAMM50-204ENST00000493161 SHMT1P34896 483 aa16.71■□□□□ 0.27
SAMM50-204ENST00000493161 ABCB5Q2M3G0 1257 aa16.71■□□□□ 0.27
SAMM50-204ENST00000493161 CERKLQ49MI3 558 aaPredicted RBP16.71■□□□□ 0.27
SAMM50-204ENST00000493161 KIAA1683Q9H0B3 1180 aa16.71■□□□□ 0.27
SAMM50-204ENST00000493161 EHD4Q9H223 541 aa16.71■□□□□ 0.27
SAMM50-204ENST00000493161 SPDYE16A6NNV3 312 aaPredicted RBP16.7■□□□□ 0.26
SAMM50-204ENST00000493161 RLBP1P12271 317 aa16.7■□□□□ 0.26
SAMM50-204ENST00000493161 CNGA1P29973 690 aa16.7■□□□□ 0.26
SAMM50-204ENST00000493161 ATN1P54259 1190 aaPredicted RBP16.7■□□□□ 0.26
SAMM50-204ENST00000493161 CCNA1P78396 465 aa16.7■□□□□ 0.26
SAMM50-204ENST00000493161 MFSD14CQ5VZR4 134 aa16.7■□□□□ 0.26
SAMM50-204ENST00000493161 RPAP3Q9H6T3 665 aaPredicted RBP16.7■□□□□ 0.26
SAMM50-204ENST00000493161 DDX20Q9UHI6 824 aaKnown RBP16.7■□□□□ 0.26
SAMM50-204ENST00000493161 IGSF3O75054 1194 aa16.69■□□□□ 0.26
SAMM50-204ENST00000493161 IGHA2P01877 340 aa16.69■□□□□ 0.26
SAMM50-204ENST00000493161 USP14P54578 494 aa16.69■□□□□ 0.26
SAMM50-204ENST00000493161 ATP2B2Q01814 1243 aa16.69■□□□□ 0.26
SAMM50-204ENST00000493161 GRB14Q14449 540 aa16.69■□□□□ 0.26
SAMM50-204ENST00000493161 SEPT2Q15019 361 aa16.69■□□□□ 0.26
SAMM50-204ENST00000493161 LBX2Q6XYB7 198 aa16.69■□□□□ 0.26
SAMM50-204ENST00000493161 RIOK1Q9BRS2 568 aaKnown RBP16.69■□□□□ 0.26
SAMM50-204ENST00000493161 LAMA2P24043 3122 aaKnown RBP16.68■□□□□ 0.26
SAMM50-204ENST00000493161 A0A1W2PRG0 241 aa16.68■□□□□ 0.26
SAMM50-204ENST00000493161 CCER2I3L3R5 266 aa16.68■□□□□ 0.26
SAMM50-204ENST00000493161 GLRX3O76003 335 aaKnown RBP16.68■□□□□ 0.26
SAMM50-204ENST00000493161 HOXC6P09630 235 aa16.68■□□□□ 0.26
SAMM50-204ENST00000493161 TTC6Q86TZ1 520 aa16.68■□□□□ 0.26
SAMM50-204ENST00000493161 UNC80Q8N2C7 3258 aa16.67■□□□□ 0.26
SAMM50-204ENST00000493161 POTEB2H3BUK9 544 aa16.67■□□□□ 0.26
SAMM50-204ENST00000493161 GABPAQ06546 454 aa16.67■□□□□ 0.26
SAMM50-204ENST00000493161 MAP3K12Q12852 859 aa16.67■□□□□ 0.26
SAMM50-204ENST00000493161 KIAA1755Q5JYT7 1200 aa16.67■□□□□ 0.26
SAMM50-204ENST00000493161 GJC2Q5T442 439 aaPredicted RBP16.67■□□□□ 0.26
SAMM50-204ENST00000493161 ANO1Q5XXA6 986 aa16.67■□□□□ 0.26
SAMM50-204ENST00000493161 ITPRIPQ8IWB1 547 aa16.67■□□□□ 0.26
SAMM50-204ENST00000493161 LPAR1Q92633 364 aa16.67■□□□□ 0.26
SAMM50-204ENST00000493161 FAM161BQ96MY7 647 aa16.67■□□□□ 0.26
SAMM50-204ENST00000493161 GUCD1Q96NT3 240 aa16.67■□□□□ 0.26
SAMM50-204ENST00000493161 MOV10L1Q9BXT6 1211 aaKnown RBP16.67■□□□□ 0.26
SAMM50-204ENST00000493161 CABP5Q9NP86 173 aa16.67■□□□□ 0.26
SAMM50-204ENST00000493161 EXOC6BQ9Y2D4 811 aa16.67■□□□□ 0.26
SAMM50-204ENST00000493161 IVNS1ABPQ9Y6Y0 642 aa16.67■□□□□ 0.26
SAMM50-204ENST00000493161 CYBAP13498 195 aa16.66■□□□□ 0.26
SAMM50-204ENST00000493161 AACSQ86V21 672 aa16.66■□□□□ 0.26
SAMM50-204ENST00000493161 MAGEB6P1A0A0J9YX57 407 aa16.65■□□□□ 0.26
SAMM50-204ENST00000493161 DNM1LO00429 736 aa16.65■□□□□ 0.26
SAMM50-204ENST00000493161 COBLO75128 1261 aa16.65■□□□□ 0.26
SAMM50-204ENST00000493161 POLR3DP05423 398 aaPredicted RBP16.65■□□□□ 0.26
SAMM50-204ENST00000493161 CYP2D6P10635 497 aa16.65■□□□□ 0.26
SAMM50-204ENST00000493161 ADORA2AP29274 412 aa16.65■□□□□ 0.26
SAMM50-204ENST00000493161 RTP1P59025 263 aa16.65■□□□□ 0.26
SAMM50-204ENST00000493161 CEP85Q6P2H3 762 aa16.65■□□□□ 0.26
SAMM50-204ENST00000493161 CERS3Q8IU89 383 aa16.65■□□□□ 0.26
SAMM50-204ENST00000493161 MPHOSPH10O00566 681 aaKnown RBP16.64■□□□□ 0.25
SAMM50-204ENST00000493161 PRAMEF19Q5SWL8 479 aa16.64■□□□□ 0.25
SAMM50-204ENST00000493161 DPP9Q86TI2 863 aa16.64■□□□□ 0.25
SAMM50-204ENST00000493161 CLEC10AQ8IUN9 316 aa16.64■□□□□ 0.25
SAMM50-204ENST00000493161 FTSJ3Q8IY81 847 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms