RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 PLCD1P51178 756 aa23.85■■□□□ 1.41
SREBF1-216ENST00000490796 ERVK-9P63128 1117 aa23.85■■□□□ 1.41
SREBF1-216ENST00000490796 ERVK-24P63145 666 aa23.85■■□□□ 1.41
SREBF1-216ENST00000490796 SIRT2Q8IXJ6 389 aa23.85■■□□□ 1.41
SREBF1-216ENST00000490796 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.85■■□□□ 1.411e-7■■■■□ 19.9
SREBF1-216ENST00000490796 TXNRD2Q9NNW7 524 aa23.85■■□□□ 1.41
SREBF1-216ENST00000490796 RBPJLQ9UBG7 517 aa23.85■■□□□ 1.41
SREBF1-216ENST00000490796 TRIOBPQ9H2D6 2365 aa23.85■■□□□ 1.41
SREBF1-216ENST00000490796 RPTORQ8N122 1335 aa23.84■■□□□ 1.41
SREBF1-216ENST00000490796 CHRDL2Q6WN34 429 aa23.84■■□□□ 1.41
SREBF1-216ENST00000490796 C12orf42Q96LP6 360 aa23.84■■□□□ 1.41
SREBF1-216ENST00000490796 BOLA2Q9H3K6 86 aa23.84■■□□□ 1.41
SREBF1-216ENST00000490796 PAG1Q9NWQ8 432 aa23.84■■□□□ 1.41
SREBF1-216ENST00000490796 EVI5O60447 810 aa23.83■■□□□ 1.41
SREBF1-216ENST00000490796 PEX10O60683 326 aa23.83■■□□□ 1.41
SREBF1-216ENST00000490796 SHMT1P34896 483 aa23.83■■□□□ 1.41
SREBF1-216ENST00000490796 CCNA1P78396 465 aa23.83■■□□□ 1.41
SREBF1-216ENST00000490796 TRMT44Q8IYL2 757 aaKnown RBP23.83■■□□□ 1.41
SREBF1-216ENST00000490796 KIAA1683Q9H0B3 1180 aa23.83■■□□□ 1.41
SREBF1-216ENST00000490796 GLRX3O76003 335 aaKnown RBP23.82■■□□□ 1.4
SREBF1-216ENST00000490796 NECAB2Q7Z6G3 386 aa23.82■■□□□ 1.4
SREBF1-216ENST00000490796 PLEKHH3Q7Z736 793 aa23.82■■□□□ 1.4
SREBF1-216ENST00000490796 AMOTL1Q8IY63 956 aa23.82■■□□□ 1.4
SREBF1-216ENST00000490796 SDR42E1Q8WUS8 393 aa23.82■■□□□ 1.4
SREBF1-216ENST00000490796 EDC3Q96F86 508 aaKnown RBP23.82■■□□□ 1.4
SREBF1-216ENST00000490796 CRISPLD2Q9H0B8 497 aa23.82■■□□□ 1.4
SREBF1-216ENST00000490796 RABGAP1Q9Y3P9 1069 aa23.82■■□□□ 1.4
SREBF1-216ENST00000490796 XRCC5P13010 732 aaKnown RBP23.81■■□□□ 1.4
SREBF1-216ENST00000490796 ZKSCAN1P17029 563 aaPredicted RBP23.81■■□□□ 1.4
SREBF1-216ENST00000490796 ATP5JP18859 108 aa23.81■■□□□ 1.4
SREBF1-216ENST00000490796 RGS2P41220 211 aa23.81■■□□□ 1.4
SREBF1-216ENST00000490796 Q3C1V9 767 aa23.81■■□□□ 1.4
SREBF1-216ENST00000490796 WDR78Q5VTH9 848 aa23.81■■□□□ 1.4
SREBF1-216ENST00000490796 GPR142Q7Z601 462 aa23.81■■□□□ 1.4
SREBF1-216ENST00000490796 LCORLQ8N3X6 602 aa23.81■■□□□ 1.4
SREBF1-216ENST00000490796 ACER1Q8TDN7 264 aa23.81■■□□□ 1.4
SREBF1-216ENST00000490796 TRIB2Q92519 343 aa23.81■■□□□ 1.4
SREBF1-216ENST00000490796 DDRGK1Q96HY6 314 aa23.81■■□□□ 1.4
SREBF1-216ENST00000490796 PAWRQ96IZ0 340 aaKnown RBP23.81■■□□□ 1.4
SREBF1-216ENST00000490796 ARMT1Q9H993 441 aa23.81■■□□□ 1.4
SREBF1-216ENST00000490796 TCRBV5S4A2TA0A5A2 114 aa23.8■■□□□ 1.4
SREBF1-216ENST00000490796 VCAM1P19320 739 aa23.8■■□□□ 1.4
SREBF1-216ENST00000490796 TRIM32Q13049 653 aa23.8■■□□□ 1.4
SREBF1-216ENST00000490796 SEPT2Q15019 361 aa23.8■■□□□ 1.4
SREBF1-216ENST00000490796 CATSPERGQ6ZRH7 1159 aa23.8■■□□□ 1.4
SREBF1-216ENST00000490796 ANKLE1Q8NAG6 615 aa23.8■■□□□ 1.4
SREBF1-216ENST00000490796 LRRCC1Q9C099 1032 aa23.8■■□□□ 1.4
SREBF1-216ENST00000490796 PORCNQ9H237 461 aa23.8■■□□□ 1.4
SREBF1-216ENST00000490796 DCP1AQ9NPI6 582 aaPredicted RBP23.8■■□□□ 1.4
SREBF1-216ENST00000490796 MBD4O95243 580 aa23.79■■□□□ 1.4
SREBF1-216ENST00000490796 PRKAR2AP13861 404 aaKnown RBP23.79■■□□□ 1.4
SREBF1-216ENST00000490796 FXR1P51114 621 aaKnown RBP eCLIP23.79■■□□□ 1.4
SREBF1-216ENST00000490796 GABPAQ06546 454 aa23.79■■□□□ 1.4
SREBF1-216ENST00000490796 RPAP3Q9H6T3 665 aaPredicted RBP23.79■■□□□ 1.4
SREBF1-216ENST00000490796 SWAP70Q9UH65 585 aa23.79■■□□□ 1.4
SREBF1-216ENST00000490796 NAV1Q8NEY1 1877 aa23.79■■□□□ 1.4
SREBF1-216ENST00000490796 ADD2P35612 726 aa23.78■■□□□ 1.4
SREBF1-216ENST00000490796 ZSCAN25Q6NSZ9 544 aa23.78■■□□□ 1.4
SREBF1-216ENST00000490796 HAUS7Q99871 368 aa23.78■■□□□ 1.4
SREBF1-216ENST00000490796 ATP8A2Q9NTI2 1148 aa23.78■■□□□ 1.4
SREBF1-216ENST00000490796 IVNS1ABPQ9Y6Y0 642 aa23.78■■□□□ 1.4
SREBF1-216ENST00000490796 CYP2D6P10635 497 aa23.76■■□□□ 1.39
SREBF1-216ENST00000490796 TMEM179Q6ZVK1 233 aa23.76■■□□□ 1.39
SREBF1-216ENST00000490796 APBA2Q99767 749 aa23.76■■□□□ 1.39
SREBF1-216ENST00000490796 NBPF3Q9H094 633 aa23.76■■□□□ 1.39
SREBF1-216ENST00000490796 PRKAB2O43741 272 aa23.75■■□□□ 1.39
SREBF1-216ENST00000490796 GUCY1A2P33402 732 aa23.75■■□□□ 1.39
SREBF1-216ENST00000490796 MAP2K5Q13163 448 aa23.75■■□□□ 1.39
SREBF1-216ENST00000490796 MORN1Q5T089 497 aa23.75■■□□□ 1.39
SREBF1-216ENST00000490796 C20orf194Q5TEA3 1177 aa23.75■■□□□ 1.39
SREBF1-216ENST00000490796 DIS3LQ8TF46 1054 aaKnown RBP23.75■■□□□ 1.39
SREBF1-216ENST00000490796 TANGO6Q9C0B7 1094 aa23.75■■□□□ 1.39
SREBF1-216ENST00000490796 SH2D4AQ9H788 454 aa23.75■■□□□ 1.39
SREBF1-216ENST00000490796 HOXC10Q9NYD6 342 aa23.75■■□□□ 1.39
SREBF1-216ENST00000490796 SMARCA5O60264 1052 aaPredicted RBP23.74■■□□□ 1.39
SREBF1-216ENST00000490796 CNMDO75829 334 aa23.74■■□□□ 1.39
SREBF1-216ENST00000490796 EVX2Q03828 476 aa23.74■■□□□ 1.39
SREBF1-216ENST00000490796 UBE3CQ15386 1083 aa23.74■■□□□ 1.39
SREBF1-216ENST00000490796 MAP3K21Q5TCX8 1036 aa23.74■■□□□ 1.39
SREBF1-216ENST00000490796 MFSD14CQ5VZR4 134 aa23.74■■□□□ 1.39
SREBF1-216ENST00000490796 LBX2Q6XYB7 198 aa23.74■■□□□ 1.39
SREBF1-216ENST00000490796 SLC44A5Q8NCS7 719 aa23.74■■□□□ 1.39
SREBF1-216ENST00000490796 USP6NLQ92738 828 aa23.74■■□□□ 1.39
SREBF1-216ENST00000490796 DYNLL2Q96FJ2 89 aa23.74■■□□□ 1.39
SREBF1-216ENST00000490796 ARHGEF10LQ9HCE6 1279 aa23.74■■□□□ 1.39
SREBF1-216ENST00000490796 RBM27Q9P2N5 1060 aaKnown RBP23.74■■□□□ 1.39
SREBF1-216ENST00000490796 SPDYE16A6NNV3 312 aaPredicted RBP23.73■■□□□ 1.39
SREBF1-216ENST00000490796 CACNB2Q08289 660 aaPredicted RBP23.73■■□□□ 1.39
SREBF1-216ENST00000490796 COG2Q14746 738 aa23.73■■□□□ 1.39
SREBF1-216ENST00000490796 CCL14Q16627 93 aa23.73■■□□□ 1.39
SREBF1-216ENST00000490796 SLFNL1Q499Z3 407 aa23.73■■□□□ 1.39
SREBF1-216ENST00000490796 POTEEQ6S8J3 1075 aa23.73■■□□□ 1.39
SREBF1-216ENST00000490796 GPATCH3Q96I76 525 aa23.73■■□□□ 1.39
SREBF1-216ENST00000490796 C11orf49Q9H6J7 331 aa23.73■■□□□ 1.39
SREBF1-216ENST00000490796 SLC4A4Q9Y6R1 1079 aa23.73■■□□□ 1.39
SREBF1-216ENST00000490796 PLXNB2O15031 1838 aa23.73■■□□□ 1.39
SREBF1-216ENST00000490796 SLC15A5A6NIM6 579 aa23.72■■□□□ 1.39
SREBF1-216ENST00000490796 CCDC17Q96LX7 622 aa23.72■■□□□ 1.39
SREBF1-216ENST00000490796 BTBD7Q9P203 1132 aa23.72■■□□□ 1.39
SREBF1-216ENST00000490796 OGDHLQ9ULD0 1010 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms