RNA–Protein interactions for RNA: ENST00000489842.1

GTF3C5-210, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 2

Gene GTF3C5, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-210ENST00000489842 MYH8P13535 1937 aa11.04□□□□□ -0.64
GTF3C5-210ENST00000489842 MPHOSPH10O00566 681 aaKnown RBP11.04□□□□□ -0.64
GTF3C5-210ENST00000489842 FARP2O94887 1054 aaPredicted RBP11.04□□□□□ -0.64
GTF3C5-210ENST00000489842 ADD2P35612 726 aa11.04□□□□□ -0.64
GTF3C5-210ENST00000489842 ERVK-9P63128 1117 aa11.04□□□□□ -0.64
GTF3C5-210ENST00000489842 ERVK-24P63145 666 aa11.04□□□□□ -0.64
GTF3C5-210ENST00000489842 PABPC4Q13310 644 aaKnown RBP eCLIP11.04□□□□□ -0.644e-6■■■■□ 22.1
GTF3C5-210ENST00000489842 USP17L2Q6R6M4 530 aa11.04□□□□□ -0.64
GTF3C5-210ENST00000489842 CHRDL2Q6WN34 429 aa11.04□□□□□ -0.64
GTF3C5-210ENST00000489842 PXYLP1Q8TE99 480 aa11.04□□□□□ -0.64
GTF3C5-210ENST00000489842 PAWRQ96IZ0 340 aaKnown RBP11.04□□□□□ -0.64
GTF3C5-210ENST00000489842 TBC1D2Q9BYX2 928 aa11.04□□□□□ -0.64
GTF3C5-210ENST00000489842 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.04□□□□□ -0.64
GTF3C5-210ENST00000489842 BTBD7Q9P203 1132 aa11.04□□□□□ -0.64
GTF3C5-210ENST00000489842 C19orf81C9J6K1 198 aa11.03□□□□□ -0.64
GTF3C5-210ENST00000489842 RAB11FIP3O75154 756 aa11.03□□□□□ -0.64
GTF3C5-210ENST00000489842 HMMRO75330 724 aa11.03□□□□□ -0.64
GTF3C5-210ENST00000489842 MS4A1P11836 297 aa11.03□□□□□ -0.64
GTF3C5-210ENST00000489842 AKR1B1P15121 316 aa11.03□□□□□ -0.64
GTF3C5-210ENST00000489842 ATP5JP18859 108 aa11.03□□□□□ -0.64
GTF3C5-210ENST00000489842 VCAM1P19320 739 aa11.03□□□□□ -0.64
GTF3C5-210ENST00000489842 TTF1Q15361 905 aaPredicted RBP11.03□□□□□ -0.64
GTF3C5-210ENST00000489842 SAMD1Q6SPF0 538 aaPredicted RBP11.03□□□□□ -0.64
GTF3C5-210ENST00000489842 TTC6Q86TZ1 520 aa11.03□□□□□ -0.64
GTF3C5-210ENST00000489842 SIAH1Q8IUQ4 282 aa11.03□□□□□ -0.64
GTF3C5-210ENST00000489842 GPRC5AQ8NFJ5 357 aa11.03□□□□□ -0.64
GTF3C5-210ENST00000489842 OTUD7AQ8TE49 926 aaPredicted RBP11.03□□□□□ -0.64
GTF3C5-210ENST00000489842 HAUS7Q99871 368 aa11.03□□□□□ -0.64
GTF3C5-210ENST00000489842 CRNKL1Q9BZJ0 848 aaKnown RBP11.03□□□□□ -0.64
GTF3C5-210ENST00000489842 PUS7LQ9H0K6 701 aaKnown RBP11.03□□□□□ -0.64
GTF3C5-210ENST00000489842 EHD4Q9H223 541 aa11.03□□□□□ -0.64
GTF3C5-210ENST00000489842 RPAP3Q9H6T3 665 aaPredicted RBP11.03□□□□□ -0.64
GTF3C5-210ENST00000489842 PAK6Q9NQU5 681 aaPredicted RBP11.03□□□□□ -0.64
GTF3C5-210ENST00000489842 FLRT1Q9NZU1 646 aa11.03□□□□□ -0.64
GTF3C5-210ENST00000489842 RLFQ13129 1914 aa11.03□□□□□ -0.64
GTF3C5-210ENST00000489842 CCND3P30281 292 aaPredicted RBP11.02□□□□□ -0.65
GTF3C5-210ENST00000489842 MNX1P50219 401 aaPredicted RBP11.02□□□□□ -0.65
GTF3C5-210ENST00000489842 FXR1P51114 621 aaKnown RBP eCLIP11.02□□□□□ -0.65
GTF3C5-210ENST00000489842 WDR78Q5VTH9 848 aa11.02□□□□□ -0.65
GTF3C5-210ENST00000489842 CATSPERGQ6ZRH7 1159 aa11.02□□□□□ -0.65
GTF3C5-210ENST00000489842 GPR142Q7Z601 462 aa11.02□□□□□ -0.65
GTF3C5-210ENST00000489842 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.02□□□□□ -0.65
GTF3C5-210ENST00000489842 CRISPLD2Q9H0B8 497 aa11.02□□□□□ -0.65
GTF3C5-210ENST00000489842 RBM27Q9P2N5 1060 aaKnown RBP11.02□□□□□ -0.65
GTF3C5-210ENST00000489842 PCDHB15Q9Y5E8 787 aa11.02□□□□□ -0.65
GTF3C5-210ENST00000489842 CEP290O15078 2479 aa11.02□□□□□ -0.65
GTF3C5-210ENST00000489842 USP17L15C9J2P7 530 aa11.01□□□□□ -0.65
GTF3C5-210ENST00000489842 USP17L13C9JLJ4 530 aa11.01□□□□□ -0.65
GTF3C5-210ENST00000489842 USP17L12C9JPN9 530 aa11.01□□□□□ -0.65
GTF3C5-210ENST00000489842 USP17L11C9JVI0 530 aa11.01□□□□□ -0.65
GTF3C5-210ENST00000489842 USP17L21D6R901 530 aa11.01□□□□□ -0.65
GTF3C5-210ENST00000489842 USP17L18D6R9N7 530 aa11.01□□□□□ -0.65
GTF3C5-210ENST00000489842 USP17L22D6RA61 530 aa11.01□□□□□ -0.65
GTF3C5-210ENST00000489842 USP17L17D6RBQ6 530 aa11.01□□□□□ -0.65
GTF3C5-210ENST00000489842 USP17L19D6RCP7 530 aa11.01□□□□□ -0.65
GTF3C5-210ENST00000489842 USP17L20D6RJB6 530 aa11.01□□□□□ -0.65
GTF3C5-210ENST00000489842 HMGCRP04035 888 aa11.01□□□□□ -0.65
GTF3C5-210ENST00000489842 PRKAR2AP13861 404 aaKnown RBP11.01□□□□□ -0.65
GTF3C5-210ENST00000489842 CACNB2Q08289 660 aaPredicted RBP11.01□□□□□ -0.65
GTF3C5-210ENST00000489842 USP17L24Q0WX57 530 aa11.01□□□□□ -0.65
GTF3C5-210ENST00000489842 MORN1Q5T089 497 aa11.01□□□□□ -0.65
GTF3C5-210ENST00000489842 SPICE1Q8N0Z3 855 aa11.01□□□□□ -0.65
GTF3C5-210ENST00000489842 NPLOC4Q8TAT6 608 aa11.01□□□□□ -0.65
GTF3C5-210ENST00000489842 USP6NLQ92738 828 aa11.01□□□□□ -0.65
GTF3C5-210ENST00000489842 C12orf42Q96LP6 360 aa11.01□□□□□ -0.65
GTF3C5-210ENST00000489842 LRRCC1Q9C099 1032 aa11.01□□□□□ -0.65
GTF3C5-210ENST00000489842 KIAA1683Q9H0B3 1180 aa11.01□□□□□ -0.65
GTF3C5-210ENST00000489842 CABP5Q9NP86 173 aa11.01□□□□□ -0.65
GTF3C5-210ENST00000489842 SZT2Q5T011 3432 aa11.01□□□□□ -0.65
GTF3C5-210ENST00000489842 SPDYE16A6NNV3 312 aaPredicted RBP11□□□□□ -0.65
GTF3C5-210ENST00000489842 CDK8P49336 464 aa11□□□□□ -0.65
GTF3C5-210ENST00000489842 C12orf60Q5U649 245 aa11□□□□□ -0.65
GTF3C5-210ENST00000489842 PLEKHH3Q7Z736 793 aa11□□□□□ -0.65
GTF3C5-210ENST00000489842 NKX2-3Q8TAU0 364 aa11□□□□□ -0.65
GTF3C5-210ENST00000489842 NUDT12Q9BQG2 462 aa11□□□□□ -0.65
GTF3C5-210ENST00000489842 HMX1Q9NP08 348 aaPredicted RBP11□□□□□ -0.65
GTF3C5-210ENST00000489842 GINM1Q9NU53 330 aa11□□□□□ -0.65
GTF3C5-210ENST00000489842 ZMYND8Q9ULU4 1186 aaPredicted RBP11□□□□□ -0.65
GTF3C5-210ENST00000489842 SLC4A4Q9Y6R1 1079 aa11□□□□□ -0.65
GTF3C5-210ENST00000489842 COL11A1P12107 1806 aaPredicted RBP11□□□□□ -0.65
GTF3C5-210ENST00000489842 PARP14Q460N5 1801 aa11□□□□□ -0.65
GTF3C5-210ENST00000489842 FRMPD3Q5JV73 1810 aa11□□□□□ -0.65
GTF3C5-210ENST00000489842 M0R2C6 588 aa10.99□□□□□ -0.65
GTF3C5-210ENST00000489842 SYN1P17600 705 aa10.99□□□□□ -0.65
GTF3C5-210ENST00000489842 ATP2B2Q01814 1243 aa10.99□□□□□ -0.65
GTF3C5-210ENST00000489842 PDE3AQ14432 1141 aa10.99□□□□□ -0.65
GTF3C5-210ENST00000489842 ANO1Q5XXA6 986 aa10.99□□□□□ -0.65
GTF3C5-210ENST00000489842 CTR9Q6PD62 1173 aa10.99□□□□□ -0.65
GTF3C5-210ENST00000489842 CCAR1Q8IX12 1150 aaKnown RBP10.99□□□□□ -0.65
GTF3C5-210ENST00000489842 C7orf61Q8IZ16 206 aa10.99□□□□□ -0.65
GTF3C5-210ENST00000489842 OSBP2Q969R2 916 aa10.99□□□□□ -0.65
GTF3C5-210ENST00000489842 CHMP4CQ96CF2 233 aa10.99□□□□□ -0.65
GTF3C5-210ENST00000489842 GCC1Q96CN9 775 aa10.99□□□□□ -0.65
GTF3C5-210ENST00000489842 ATG4CQ96DT6 458 aa10.99□□□□□ -0.65
GTF3C5-210ENST00000489842 SEC62Q99442 399 aaKnown RBP10.99□□□□□ -0.65
GTF3C5-210ENST00000489842 TANGO6Q9C0B7 1094 aa10.99□□□□□ -0.65
GTF3C5-210ENST00000489842 CWC22Q9HCG8 908 aaKnown RBP10.99□□□□□ -0.65
GTF3C5-210ENST00000489842 FBXO28Q9NVF7 368 aa10.99□□□□□ -0.65
GTF3C5-210ENST00000489842 STAP2Q9UGK3 403 aa10.99□□□□□ -0.65
GTF3C5-210ENST00000489842 RPTORQ8N122 1335 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms