RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 CYP2B6P20813 491 aa15.01□□□□□ -0.01
SREBF1-215ENST00000487401 ERVK-9P63128 1117 aa15.01□□□□□ -0.01
SREBF1-215ENST00000487401 ERVK-24P63145 666 aa15.01□□□□□ -0.01
SREBF1-215ENST00000487401 SEPT2Q15019 361 aa15.01□□□□□ -0.01
SREBF1-215ENST00000487401 UBE3CQ15386 1083 aa15.01□□□□□ -0.01
SREBF1-215ENST00000487401 Q3C1V9 767 aa15.01□□□□□ -0.01
SREBF1-215ENST00000487401 GPATCH3Q96I76 525 aa15.01□□□□□ -0.01
SREBF1-215ENST00000487401 ECHDC1Q9NTX5 307 aa15.01□□□□□ -0.01
SREBF1-215ENST00000487401 SWAP70Q9UH65 585 aa15.01□□□□□ -0.01
SREBF1-215ENST00000487401 PDE4DIPQ5VU43 2346 aa15□□□□□ -0.01
SREBF1-215ENST00000487401 H0YGN5 161 aa15□□□□□ -0.01
SREBF1-215ENST00000487401 PRKAB2O43741 272 aa15□□□□□ -0.01
SREBF1-215ENST00000487401 CCNA1P78396 465 aa15□□□□□ -0.01
SREBF1-215ENST00000487401 SLFNL1Q499Z3 407 aa15□□□□□ -0.01
SREBF1-215ENST00000487401 HABP4Q5JVS0 413 aaKnown RBP15□□□□□ -0.01
SREBF1-215ENST00000487401 CATSPERGQ6ZRH7 1159 aa15□□□□□ -0.01
SREBF1-215ENST00000487401 PLEKHH3Q7Z736 793 aa15□□□□□ -0.01
SREBF1-215ENST00000487401 SOCS4Q8WXH5 440 aa15□□□□□ -0.01
SREBF1-215ENST00000487401 XRN2Q9H0D6 950 aaKnown RBP eCLIP15□□□□□ -0.01
SREBF1-215ENST00000487401 DCTPP1Q9H773 170 aa15□□□□□ -0.01
SREBF1-215ENST00000487401 PAK6Q9NQU5 681 aaPredicted RBP15□□□□□ -0.01
SREBF1-215ENST00000487401 RABGAP1Q9Y3P9 1069 aa15□□□□□ -0.01
SREBF1-215ENST00000487401 DOCK1Q14185 1865 aa14.99□□□□□ -0.01
SREBF1-215ENST00000487401 MKI67P46013 3256 aaKnown RBP14.99□□□□□ -0.01
SREBF1-215ENST00000487401 GLRX3O76003 335 aaKnown RBP14.99□□□□□ -0.01
SREBF1-215ENST00000487401 VCAM1P19320 739 aa14.99□□□□□ -0.01
SREBF1-215ENST00000487401 GUCY1A2P33402 732 aa14.99□□□□□ -0.01
SREBF1-215ENST00000487401 TMEM179Q6ZVK1 233 aa14.99□□□□□ -0.01
SREBF1-215ENST00000487401 UBE2Q1Q7Z7E8 422 aa14.99□□□□□ -0.01
SREBF1-215ENST00000487401 TRMT44Q8IYL2 757 aaKnown RBP14.99□□□□□ -0.01
SREBF1-215ENST00000487401 DYNLL2Q96FJ2 89 aa14.99□□□□□ -0.01
SREBF1-215ENST00000487401 RPAP3Q9H6T3 665 aaPredicted RBP14.99□□□□□ -0.01
SREBF1-215ENST00000487401 HMX1Q9NP08 348 aaPredicted RBP14.99□□□□□ -0.01
SREBF1-215ENST00000487401 BRCA2P51587 3418 aa14.99□□□□□ -0.01
SREBF1-215ENST00000487401 MAST2Q6P0Q8 1798 aa14.98□□□□□ -0.01
SREBF1-215ENST00000487401 RPTORQ8N122 1335 aa14.98□□□□□ -0.01
SREBF1-215ENST00000487401 XRCC5P13010 732 aaKnown RBP14.98□□□□□ -0.01
SREBF1-215ENST00000487401 RGS2P41220 211 aa14.98□□□□□ -0.01
SREBF1-215ENST00000487401 EVX2Q03828 476 aa14.98□□□□□ -0.01
SREBF1-215ENST00000487401 WDR78Q5VTH9 848 aa14.98□□□□□ -0.01
SREBF1-215ENST00000487401 GPR142Q7Z601 462 aa14.98□□□□□ -0.01
SREBF1-215ENST00000487401 SLC44A5Q8NCS7 719 aa14.98□□□□□ -0.01
SREBF1-215ENST00000487401 PORCNQ9H237 461 aa14.98□□□□□ -0.01
SREBF1-215ENST00000487401 NR2E3Q9Y5X4 410 aa14.98□□□□□ -0.01
SREBF1-215ENST00000487401 SLC4A4Q9Y6R1 1079 aa14.98□□□□□ -0.01
SREBF1-215ENST00000487401 ZSWIM8A7E2V4 1837 aa14.97□□□□□ -0.01
SREBF1-215ENST00000487401 USP17L12C9JPN9 530 aa14.97□□□□□ -0.01
SREBF1-215ENST00000487401 USP17L21D6R901 530 aa14.97□□□□□ -0.01
SREBF1-215ENST00000487401 CHGBP05060 677 aa14.97□□□□□ -0.01
SREBF1-215ENST00000487401 ZKSCAN1P17029 563 aaPredicted RBP14.97□□□□□ -0.01
SREBF1-215ENST00000487401 TRIM32Q13049 653 aa14.97□□□□□ -0.01
SREBF1-215ENST00000487401 C12orf60Q5U649 245 aa14.97□□□□□ -0.01
SREBF1-215ENST00000487401 CCDC17Q96LX7 622 aa14.97□□□□□ -0.01
SREBF1-215ENST00000487401 CRISPLD2Q9H0B8 497 aa14.97□□□□□ -0.01
SREBF1-215ENST00000487401 SH2D4AQ9H788 454 aa14.97□□□□□ -0.01
SREBF1-215ENST00000487401 ARHGEF10LQ9HCE6 1279 aa14.97□□□□□ -0.01
SREBF1-215ENST00000487401 HOXC10Q9NYD6 342 aa14.97□□□□□ -0.01
SREBF1-215ENST00000487401 KIAA0100Q14667 2235 aaKnown RBP14.97□□□□□ -0.01
SREBF1-215ENST00000487401 A0A1W2PRG0 241 aa14.96□□□□□ -0.01
SREBF1-215ENST00000487401 CNMDO75829 334 aa14.96□□□□□ -0.01
SREBF1-215ENST00000487401 AKR1B1P15121 316 aa14.96□□□□□ -0.01
SREBF1-215ENST00000487401 COG2Q14746 738 aa14.96□□□□□ -0.01
SREBF1-215ENST00000487401 MORN1Q5T089 497 aa14.96□□□□□ -0.01
SREBF1-215ENST00000487401 POTEEQ6S8J3 1075 aa14.96□□□□□ -0.01
SREBF1-215ENST00000487401 NECAB2Q7Z6G3 386 aa14.96□□□□□ -0.01
SREBF1-215ENST00000487401 TRIB2Q92519 343 aa14.96□□□□□ -0.01
SREBF1-215ENST00000487401 TANGO6Q9C0B7 1094 aa14.96□□□□□ -0.01
SREBF1-215ENST00000487401 PUS7LQ9H0K6 701 aaKnown RBP14.96□□□□□ -0.01
SREBF1-215ENST00000487401 COLQQ9Y215 455 aaPredicted RBP14.96□□□□□ -0.01
SREBF1-215ENST00000487401 CYP2D7A0A087X1C5 515 aa14.95□□□□□ -0.02
SREBF1-215ENST00000487401 PRKAR2AP13861 404 aaKnown RBP14.95□□□□□ -0.02
SREBF1-215ENST00000487401 CDK8P49336 464 aa14.95□□□□□ -0.02
SREBF1-215ENST00000487401 ICA1Q05084 483 aa14.95□□□□□ -0.02
SREBF1-215ENST00000487401 LBX2Q6XYB7 198 aa14.95□□□□□ -0.02
SREBF1-215ENST00000487401 KBTBD3Q8NAB2 608 aa14.95□□□□□ -0.02
SREBF1-215ENST00000487401 ANKLE1Q8NAG6 615 aa14.95□□□□□ -0.02
SREBF1-215ENST00000487401 USP6NLQ92738 828 aa14.95□□□□□ -0.02
SREBF1-215ENST00000487401 PAWRQ96IZ0 340 aaKnown RBP14.95□□□□□ -0.02
SREBF1-215ENST00000487401 APBA2Q99767 749 aa14.95□□□□□ -0.02
SREBF1-215ENST00000487401 IVNS1ABPQ9Y6Y0 642 aa14.95□□□□□ -0.02
SREBF1-215ENST00000487401 SLC15A5A6NIM6 579 aa14.94□□□□□ -0.02
SREBF1-215ENST00000487401 SPDYE16A6NNV3 312 aaPredicted RBP14.94□□□□□ -0.02
SREBF1-215ENST00000487401 RNF113AO15541 343 aaKnown RBP14.94□□□□□ -0.02
SREBF1-215ENST00000487401 EVI5O60447 810 aa14.94□□□□□ -0.02
SREBF1-215ENST00000487401 ATP2B2Q01814 1243 aa14.94□□□□□ -0.02
SREBF1-215ENST00000487401 MAP2K5Q13163 448 aa14.94□□□□□ -0.02
SREBF1-215ENST00000487401 LRRFIP1Q32MZ4 808 aaKnown RBP14.94□□□□□ -0.02
SREBF1-215ENST00000487401 TSHZ3Q63HK5 1081 aa14.94□□□□□ -0.02
SREBF1-215ENST00000487401 CTR9Q6PD62 1173 aa14.94□□□□□ -0.02
SREBF1-215ENST00000487401 C16orf86Q6ZW13 317 aa14.94□□□□□ -0.02
SREBF1-215ENST00000487401 LPAR1Q92633 364 aa14.94□□□□□ -0.02
SREBF1-215ENST00000487401 STRBPQ96SI9 672 aaKnown RBP14.94□□□□□ -0.02
SREBF1-215ENST00000487401 BTBD7Q9P203 1132 aa14.94□□□□□ -0.02
SREBF1-215ENST00000487401 ZFYP08048 801 aaPredicted RBP14.93□□□□□ -0.02
SREBF1-215ENST00000487401 PTPREP23469 700 aa14.93□□□□□ -0.02
SREBF1-215ENST00000487401 CACNB2Q08289 660 aaPredicted RBP14.93□□□□□ -0.02
SREBF1-215ENST00000487401 MAP3K21Q5TCX8 1036 aa14.93□□□□□ -0.02
SREBF1-215ENST00000487401 MFSD14CQ5VZR4 134 aa14.93□□□□□ -0.02
SREBF1-215ENST00000487401 CHRDL2Q6WN34 429 aa14.93□□□□□ -0.02
SREBF1-215ENST00000487401 APPBP2Q92624 585 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms