RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 IL27Q8NEV9 243 aa19.01■□□□□ 0.63
U2AF1-211ENST00000486519 FAM163AQ96GL9 167 aaPredicted RBP19.01■□□□□ 0.63
U2AF1-211ENST00000486519 CWC22Q9HCG8 908 aaKnown RBP19.01■□□□□ 0.63
U2AF1-211ENST00000486519 ZNF236Q9UL36 1845 aa19■□□□□ 0.63
U2AF1-211ENST00000486519 GPR75-ASB3A0A0A6YYF3 556 aa19■□□□□ 0.63
U2AF1-211ENST00000486519 RAG1P15918 1043 aa19■□□□□ 0.63
U2AF1-211ENST00000486519 BTBD7Q9P203 1132 aa19■□□□□ 0.63
U2AF1-211ENST00000486519 ABCF2Q9UG63 623 aa19■□□□□ 0.63
U2AF1-211ENST00000486519 DENND2AQ9ULE3 1009 aa19■□□□□ 0.63
U2AF1-211ENST00000486519 TACC3Q9Y6A5 838 aa19■□□□□ 0.63
U2AF1-211ENST00000486519 PQBP1O60828 265 aaKnown RBP18.99■□□□□ 0.63
U2AF1-211ENST00000486519 GDF11O95390 407 aa18.99■□□□□ 0.63
U2AF1-211ENST00000486519 MECOMQ03112 1051 aa18.99■□□□□ 0.63
U2AF1-211ENST00000486519 RASGRF1Q13972 1273 aa18.99■□□□□ 0.63
U2AF1-211ENST00000486519 CXXC1Q9P0U4 656 aaPredicted RBP18.99■□□□□ 0.63
U2AF1-211ENST00000486519 ATP2B3Q16720 1220 aa18.98■□□□□ 0.63
U2AF1-211ENST00000486519 TMEM31Q5JXX7 168 aa18.98■□□□□ 0.63
U2AF1-211ENST00000486519 CCDC129Q6ZRS4 1044 aa18.98■□□□□ 0.63
U2AF1-211ENST00000486519 USP17L10C9JJH3 530 aa18.97■□□□□ 0.63
U2AF1-211ENST00000486519 SEPT4O43236 478 aa18.97■□□□□ 0.63
U2AF1-211ENST00000486519 NPM3O75607 178 aaKnown RBP18.97■□□□□ 0.63
U2AF1-211ENST00000486519 FAAP100Q0VG06 881 aa18.97■□□□□ 0.63
U2AF1-211ENST00000486519 ZYXQ15942 572 aaKnown RBP18.97■□□□□ 0.63
U2AF1-211ENST00000486519 RASIP1Q5U651 963 aa18.97■□□□□ 0.63
U2AF1-211ENST00000486519 MICALL1Q8N3F8 863 aa18.97■□□□□ 0.63
U2AF1-211ENST00000486519 PHF24Q9UPV7 400 aa18.97■□□□□ 0.63
U2AF1-211ENST00000486519 RABGAP1Q9Y3P9 1069 aa18.97■□□□□ 0.63
U2AF1-211ENST00000486519 FOCADQ5VW36 1801 aa18.97■□□□□ 0.63
U2AF1-211ENST00000486519 ZNFX1Q9P2E3 1918 aaKnown RBP18.96■□□□□ 0.63
U2AF1-211ENST00000486519 C19orf81C9J6K1 198 aa18.96■□□□□ 0.63
U2AF1-211ENST00000486519 TMEM240Q5SV17 173 aa18.96■□□□□ 0.63
U2AF1-211ENST00000486519 CCDC102BQ68D86 513 aa18.96■□□□□ 0.63
U2AF1-211ENST00000486519 SIL1Q9H173 461 aa18.96■□□□□ 0.63
U2AF1-211ENST00000486519 NKX2-4Q9H2Z4 354 aa18.96■□□□□ 0.63
U2AF1-211ENST00000486519 TMEM39AQ9NV64 488 aa18.96■□□□□ 0.63
U2AF1-211ENST00000486519 YBX2Q9Y2T7 364 aaKnown RBP18.96■□□□□ 0.63
U2AF1-211ENST00000486519 COBLO75128 1261 aa18.95■□□□□ 0.62
U2AF1-211ENST00000486519 GNL3LQ9NVN8 582 aaKnown RBP18.95■□□□□ 0.62
U2AF1-211ENST00000486519 IL16Q14005 1332 aa18.95■□□□□ 0.62
U2AF1-211ENST00000486519 SEMA3EO15041 775 aa18.94■□□□□ 0.62
U2AF1-211ENST00000486519 ASNSP08243 561 aa18.94■□□□□ 0.62
U2AF1-211ENST00000486519 MRE11P49959 708 aa18.94■□□□□ 0.62
U2AF1-211ENST00000486519 CCDC27Q2M243 656 aa18.94■□□□□ 0.62
U2AF1-211ENST00000486519 GTF3C2Q8WUA4 911 aaPredicted RBP18.94■□□□□ 0.62
U2AF1-211ENST00000486519 LENG1Q96BZ8 264 aaPredicted RBP18.94■□□□□ 0.62
U2AF1-211ENST00000486519 ZBTB21Q9ULJ3 1066 aa18.94■□□□□ 0.62
U2AF1-211ENST00000486519 GLRX3O76003 335 aaKnown RBP18.93■□□□□ 0.62
U2AF1-211ENST00000486519 PGK1P00558 417 aa18.93■□□□□ 0.62
U2AF1-211ENST00000486519 ACRP10323 421 aa18.93■□□□□ 0.62
U2AF1-211ENST00000486519 ADORA2AP29274 412 aa18.93■□□□□ 0.62
U2AF1-211ENST00000486519 DDX10Q13206 875 aaKnown RBP18.93■□□□□ 0.62
U2AF1-211ENST00000486519 OLFML2BQ68BL8 750 aa18.93■□□□□ 0.62
U2AF1-211ENST00000486519 PI16Q6UXB8 463 aa18.93■□□□□ 0.62
U2AF1-211ENST00000486519 SH3RF3Q8TEJ3 882 aaPredicted RBP18.93■□□□□ 0.62
U2AF1-211ENST00000486519 HERC5Q9UII4 1024 aaKnown RBP18.93■□□□□ 0.62
U2AF1-211ENST00000486519 PRRC2BQ5JSZ5 2229 aaKnown RBP18.93■□□□□ 0.62
U2AF1-211ENST00000486519 A0A0G2JMZ2 1700 aa18.92■□□□□ 0.62
U2AF1-211ENST00000486519 A0A1W2PQ45 241 aaPredicted RBP18.92■□□□□ 0.62
U2AF1-211ENST00000486519 A0A1W2PQY0 241 aa18.92■□□□□ 0.62
U2AF1-211ENST00000486519 CCNA1P78396 465 aa18.92■□□□□ 0.62
U2AF1-211ENST00000486519 ZGPATQ8N5A5 531 aaKnown RBP18.92■□□□□ 0.62
U2AF1-211ENST00000486519 SLC44A5Q8NCS7 719 aa18.92■□□□□ 0.62
U2AF1-211ENST00000486519 IVNS1ABPQ9Y6Y0 642 aa18.92■□□□□ 0.62
U2AF1-211ENST00000486519 MYO5AQ9Y4I1 1855 aaKnown RBP18.91■□□□□ 0.62
U2AF1-211ENST00000486519 GPR37L1O60883 481 aa18.91■□□□□ 0.62
U2AF1-211ENST00000486519 USP17L2Q6R6M4 530 aa18.91■□□□□ 0.62
U2AF1-211ENST00000486519 CATSPERGQ6ZRH7 1159 aa18.91■□□□□ 0.62
U2AF1-211ENST00000486519 TBC1D9Q6ZT07 1266 aa18.91■□□□□ 0.62
U2AF1-211ENST00000486519 DPP9Q86TI2 863 aa18.91■□□□□ 0.62
U2AF1-211ENST00000486519 SLF2Q8IX21 1173 aa18.91■□□□□ 0.62
U2AF1-211ENST00000486519 TEX11Q8IYF3 940 aa18.91■□□□□ 0.62
U2AF1-211ENST00000486519 USP44Q9H0E7 712 aa18.91■□□□□ 0.62
U2AF1-211ENST00000486519 CD320Q9NPF0 282 aa18.91■□□□□ 0.62
U2AF1-211ENST00000486519 TBX21Q9UL17 535 aa18.91■□□□□ 0.62
U2AF1-211ENST00000486519 SPDYE16A6NNV3 312 aaPredicted RBP18.9■□□□□ 0.62
U2AF1-211ENST00000486519 TIMP1P01033 207 aa18.9■□□□□ 0.62
U2AF1-211ENST00000486519 CSF2RAP15509 400 aa18.9■□□□□ 0.62
U2AF1-211ENST00000486519 ZNF365Q70YC5 407 aa18.9■□□□□ 0.62
U2AF1-211ENST00000486519 ERICH6Q7L0X2 663 aa18.9■□□□□ 0.62
U2AF1-211ENST00000486519 NSUN4Q96CB9 384 aaKnown RBP18.9■□□□□ 0.62
U2AF1-211ENST00000486519 XPNPEP3Q9NQH7 507 aa18.9■□□□□ 0.62
U2AF1-211ENST00000486519 PI4KBQ9UBF8 816 aa18.9■□□□□ 0.62
U2AF1-211ENST00000486519 USP17L15C9J2P7 530 aa18.89■□□□□ 0.61
U2AF1-211ENST00000486519 USP17L13C9JLJ4 530 aa18.89■□□□□ 0.61
U2AF1-211ENST00000486519 USP17L11C9JVI0 530 aa18.89■□□□□ 0.61
U2AF1-211ENST00000486519 USP17L18D6R9N7 530 aa18.89■□□□□ 0.61
U2AF1-211ENST00000486519 USP17L22D6RA61 530 aa18.89■□□□□ 0.61
U2AF1-211ENST00000486519 USP17L17D6RBQ6 530 aa18.89■□□□□ 0.61
U2AF1-211ENST00000486519 USP17L19D6RCP7 530 aa18.89■□□□□ 0.61
U2AF1-211ENST00000486519 USP17L20D6RJB6 530 aa18.89■□□□□ 0.61
U2AF1-211ENST00000486519 RFXAPO00287 272 aa18.89■□□□□ 0.61
U2AF1-211ENST00000486519 MYOGP15173 224 aa18.89■□□□□ 0.61
U2AF1-211ENST00000486519 TAL1P17542 331 aaPredicted RBP18.89■□□□□ 0.61
U2AF1-211ENST00000486519 USP17L24Q0WX57 530 aa18.89■□□□□ 0.61
U2AF1-211ENST00000486519 CCDC184Q52MB2 194 aa18.89■□□□□ 0.61
U2AF1-211ENST00000486519 KRT40Q6A162 431 aa18.89■□□□□ 0.61
U2AF1-211ENST00000486519 C12orf42Q96LP6 360 aa18.89■□□□□ 0.61
U2AF1-211ENST00000486519 MOV10L1Q9BXT6 1211 aaKnown RBP18.89■□□□□ 0.61
U2AF1-211ENST00000486519 PA2G4Q9UQ80 394 aaKnown RBP18.89■□□□□ 0.61
U2AF1-211ENST00000486519 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 176.6 ms