RNA–Protein interactions for RNA: ENST00000485532.1

PRAME-212, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 3

Gene PRAME, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-212ENST00000485532 RPAP2Q8IXW5 612 aaPredicted RBP15.32■□□□□ 0.04
PRAME-212ENST00000485532 CLASRPQ8N2M8 674 aaKnown RBP15.32■□□□□ 0.04
PRAME-212ENST00000485532 LCORLQ8N3X6 602 aa15.32■□□□□ 0.04
PRAME-212ENST00000485532 SDR42E1Q8WUS8 393 aa15.32■□□□□ 0.04
PRAME-212ENST00000485532 FEZ1Q99689 392 aa15.32■□□□□ 0.04
PRAME-212ENST00000485532 BAZ2AQ9UIF9 1905 aaKnown RBP15.31■□□□□ 0.04
PRAME-212ENST00000485532 CNMDO75829 334 aa15.31■□□□□ 0.04
PRAME-212ENST00000485532 POLR3DP05423 398 aaPredicted RBP15.31■□□□□ 0.04
PRAME-212ENST00000485532 IFIT2P09913 472 aaKnown RBP15.31■□□□□ 0.04
PRAME-212ENST00000485532 TTF1Q15361 905 aaPredicted RBP15.31■□□□□ 0.04
PRAME-212ENST00000485532 CCL14Q16627 93 aa15.31■□□□□ 0.04
PRAME-212ENST00000485532 C20orf194Q5TEA3 1177 aa15.31■□□□□ 0.04
PRAME-212ENST00000485532 CERS3Q8IU89 383 aa15.31■□□□□ 0.04
PRAME-212ENST00000485532 C12orf42Q96LP6 360 aa15.31■□□□□ 0.04
PRAME-212ENST00000485532 NUDT12Q9BQG2 462 aa15.31■□□□□ 0.04
PRAME-212ENST00000485532 BOLA2Q9H3K6 86 aa15.31■□□□□ 0.04
PRAME-212ENST00000485532 HMX1Q9NP08 348 aaPredicted RBP15.31■□□□□ 0.04
PRAME-212ENST00000485532 DDX19BQ9UMR2 479 aa15.31■□□□□ 0.04
PRAME-212ENST00000485532 RPTORQ8N122 1335 aa15.31■□□□□ 0.04
PRAME-212ENST00000485532 SMIM22K7EJ46 135 aa15.3■□□□□ 0.04
PRAME-212ENST00000485532 MS4A1P11836 297 aa15.3■□□□□ 0.04
PRAME-212ENST00000485532 VCAM1P19320 739 aa15.3■□□□□ 0.04
PRAME-212ENST00000485532 MNX1P50219 401 aaPredicted RBP15.3■□□□□ 0.04
PRAME-212ENST00000485532 GABPAQ06546 454 aa15.3■□□□□ 0.04
PRAME-212ENST00000485532 SEPT2Q15019 361 aa15.3■□□□□ 0.04
PRAME-212ENST00000485532 GPR142Q7Z601 462 aa15.3■□□□□ 0.04
PRAME-212ENST00000485532 SLC44A5Q8NCS7 719 aa15.3■□□□□ 0.04
PRAME-212ENST00000485532 USP6NLQ92738 828 aa15.3■□□□□ 0.04
PRAME-212ENST00000485532 CRNKL1Q9BZJ0 848 aaKnown RBP15.3■□□□□ 0.04
PRAME-212ENST00000485532 KIAA1683Q9H0B3 1180 aa15.3■□□□□ 0.04
PRAME-212ENST00000485532 ARMT1Q9H993 441 aa15.3■□□□□ 0.04
PRAME-212ENST00000485532 MCM9Q9NXL9 1143 aa15.3■□□□□ 0.04
PRAME-212ENST00000485532 A0A1W2PRG0 241 aa15.29■□□□□ 0.04
PRAME-212ENST00000485532 USP17L15C9J2P7 530 aa15.29■□□□□ 0.04
PRAME-212ENST00000485532 USP17L13C9JLJ4 530 aa15.29■□□□□ 0.04
PRAME-212ENST00000485532 USP17L11C9JVI0 530 aa15.29■□□□□ 0.04
PRAME-212ENST00000485532 USP17L18D6R9N7 530 aa15.29■□□□□ 0.04
PRAME-212ENST00000485532 USP17L22D6RA61 530 aa15.29■□□□□ 0.04
PRAME-212ENST00000485532 USP17L17D6RBQ6 530 aa15.29■□□□□ 0.04
PRAME-212ENST00000485532 USP17L19D6RCP7 530 aa15.29■□□□□ 0.04
PRAME-212ENST00000485532 USP17L20D6RJB6 530 aa15.29■□□□□ 0.04
PRAME-212ENST00000485532 PRKAB2O43741 272 aa15.29■□□□□ 0.04
PRAME-212ENST00000485532 EVI5O60447 810 aa15.29■□□□□ 0.04
PRAME-212ENST00000485532 HMMRO75330 724 aa15.29■□□□□ 0.04
PRAME-212ENST00000485532 PRKAR2AP13861 404 aaKnown RBP15.29■□□□□ 0.04
PRAME-212ENST00000485532 MAPK4P31152 587 aa15.29■□□□□ 0.04
PRAME-212ENST00000485532 USP17L24Q0WX57 530 aa15.29■□□□□ 0.04
PRAME-212ENST00000485532 MORN1Q5T089 497 aa15.29■□□□□ 0.04
PRAME-212ENST00000485532 MAP3K21Q5TCX8 1036 aa15.29■□□□□ 0.04
PRAME-212ENST00000485532 CATSPERGQ6ZRH7 1159 aa15.29■□□□□ 0.04
PRAME-212ENST00000485532 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.29■□□□□ 0.04
PRAME-212ENST00000485532 DYNLL2Q96FJ2 89 aa15.29■□□□□ 0.04
PRAME-212ENST00000485532 PRO3102Q9H379 93 aa15.29■□□□□ 0.04
PRAME-212ENST00000485532 CABP5Q9NP86 173 aa15.29■□□□□ 0.04
PRAME-212ENST00000485532 DCP1AQ9NPI6 582 aaPredicted RBP15.29■□□□□ 0.04
PRAME-212ENST00000485532 BTBD7Q9P203 1132 aa15.29■□□□□ 0.04
PRAME-212ENST00000485532 NR2E3Q9Y5X4 410 aa15.29■□□□□ 0.04
PRAME-212ENST00000485532 MYH8P13535 1937 aa15.29■□□□□ 0.04
PRAME-212ENST00000485532 MYH7P12883 1935 aa15.28■□□□□ 0.04
PRAME-212ENST00000485532 MPHOSPH10O00566 681 aaKnown RBP15.28■□□□□ 0.04
PRAME-212ENST00000485532 SMARCA5O60264 1052 aaPredicted RBP15.28■□□□□ 0.04
PRAME-212ENST00000485532 CCND3P30281 292 aaPredicted RBP15.28■□□□□ 0.04
PRAME-212ENST00000485532 CACNB2Q08289 660 aaPredicted RBP15.28■□□□□ 0.04
PRAME-212ENST00000485532 PDE3AQ14432 1141 aa15.28■□□□□ 0.04
PRAME-212ENST00000485532 KIAA1755Q5JYT7 1200 aa15.28■□□□□ 0.04
PRAME-212ENST00000485532 TMED8Q6PL24 325 aaPredicted RBP15.28■□□□□ 0.04
PRAME-212ENST00000485532 NECAB2Q7Z6G3 386 aa15.28■□□□□ 0.04
PRAME-212ENST00000485532 PLEKHH3Q7Z736 793 aa15.28■□□□□ 0.04
PRAME-212ENST00000485532 CLEC10AQ8IUN9 316 aa15.28■□□□□ 0.04
PRAME-212ENST00000485532 CCAR1Q8IX12 1150 aaKnown RBP15.28■□□□□ 0.04
PRAME-212ENST00000485532 SOCS4Q8WXH5 440 aa15.28■□□□□ 0.04
PRAME-212ENST00000485532 RPAP3Q9H6T3 665 aaPredicted RBP15.28■□□□□ 0.04
PRAME-212ENST00000485532 PAG1Q9NWQ8 432 aa15.28■□□□□ 0.04
PRAME-212ENST00000485532 RABGAP1Q9Y3P9 1069 aa15.28■□□□□ 0.04
PRAME-212ENST00000485532 CYP2D7A0A087X1C5 515 aa15.27■□□□□ 0.04
PRAME-212ENST00000485532 RAB11FIP3O75154 756 aa15.27■□□□□ 0.04
PRAME-212ENST00000485532 MBD4O95243 580 aa15.27■□□□□ 0.04
PRAME-212ENST00000485532 XRCC5P13010 732 aaKnown RBP15.27■□□□□ 0.04
PRAME-212ENST00000485532 ZKSCAN1P17029 563 aaPredicted RBP15.27■□□□□ 0.04
PRAME-212ENST00000485532 ADD2P35612 726 aa15.27■□□□□ 0.04
PRAME-212ENST00000485532 USP14P54578 494 aa15.27■□□□□ 0.04
PRAME-212ENST00000485532 IRX6P78412 446 aaPredicted RBP15.27■□□□□ 0.04
PRAME-212ENST00000485532 WDR78Q5VTH9 848 aa15.27■□□□□ 0.04
PRAME-212ENST00000485532 FLRT1Q9NZU1 646 aa15.27■□□□□ 0.04
PRAME-212ENST00000485532 RLFQ13129 1914 aa15.27■□□□□ 0.03
PRAME-212ENST00000485532 SPDYE16A6NNV3 312 aaPredicted RBP15.26■□□□□ 0.03
PRAME-212ENST00000485532 ATP5JP18859 108 aa15.26■□□□□ 0.03
PRAME-212ENST00000485532 RGS2P41220 211 aa15.26■□□□□ 0.03
PRAME-212ENST00000485532 C7orf61Q8IZ16 206 aa15.26■□□□□ 0.03
PRAME-212ENST00000485532 GTF3C2Q8WUA4 911 aaPredicted RBP15.26■□□□□ 0.03
PRAME-212ENST00000485532 CWC22Q9HCG8 908 aaKnown RBP15.26■□□□□ 0.03
PRAME-212ENST00000485532 STAP2Q9UGK3 403 aa15.26■□□□□ 0.03
PRAME-212ENST00000485532 OGDHLQ9ULD0 1010 aa15.26■□□□□ 0.03
PRAME-212ENST00000485532 DNAH12Q6ZR08 3092 aa15.26■□□□□ 0.03
PRAME-212ENST00000485532 FRMPD3Q5JV73 1810 aa15.26■□□□□ 0.03
PRAME-212ENST00000485532 AKR1B1P15121 316 aa15.25■□□□□ 0.03
PRAME-212ENST00000485532 MAP2K5Q13163 448 aa15.25■□□□□ 0.03
PRAME-212ENST00000485532 ANKLE1Q8NAG6 615 aa15.25■□□□□ 0.03
PRAME-212ENST00000485532 APBA2Q99767 749 aa15.25■□□□□ 0.03
PRAME-212ENST00000485532 HAUS7Q99871 368 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms