RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 USP17L22D6RA61 530 aa13.44□□□□□ -0.26
SORT1-204ENST00000482236 USP17L17D6RBQ6 530 aa13.44□□□□□ -0.26
SORT1-204ENST00000482236 USP17L19D6RCP7 530 aa13.44□□□□□ -0.26
SORT1-204ENST00000482236 USP17L20D6RJB6 530 aa13.44□□□□□ -0.26
SORT1-204ENST00000482236 ADCY3O60266 1144 aa13.44□□□□□ -0.26
SORT1-204ENST00000482236 GNAT2P19087 354 aa13.44□□□□□ -0.26
SORT1-204ENST00000482236 FLT3LGP49771 235 aa13.44□□□□□ -0.26
SORT1-204ENST00000482236 HERVK_113P62684 666 aa13.44□□□□□ -0.26
SORT1-204ENST00000482236 CCNA1P78396 465 aa13.44□□□□□ -0.26
SORT1-204ENST00000482236 USP17L24Q0WX57 530 aa13.44□□□□□ -0.26
SORT1-204ENST00000482236 SEPT2Q15019 361 aa13.44□□□□□ -0.26
SORT1-204ENST00000482236 SLC44A5Q8NCS7 719 aa13.44□□□□□ -0.26
SORT1-204ENST00000482236 PUS7LQ9H0K6 701 aaKnown RBP13.44□□□□□ -0.26
SORT1-204ENST00000482236 RNF208Q9H0X6 261 aa13.44□□□□□ -0.26
SORT1-204ENST00000482236 ZNF287Q9HBT7 754 aa13.44□□□□□ -0.26
SORT1-204ENST00000482236 CDK5RAP2Q96SN8 1893 aa13.44□□□□□ -0.26
SORT1-204ENST00000482236 CYP2D7A0A087X1C5 515 aa13.43□□□□□ -0.26
SORT1-204ENST00000482236 TRIM6-TRIM34B2RNG4 842 aa13.43□□□□□ -0.26
SORT1-204ENST00000482236 SLC3A2P08195 630 aaKnown RBP13.43□□□□□ -0.26
SORT1-204ENST00000482236 JAG1P78504 1218 aa13.43□□□□□ -0.26
SORT1-204ENST00000482236 CAP1Q01518 475 aa13.43□□□□□ -0.26
SORT1-204ENST00000482236 AAMPQ13685 434 aa13.43□□□□□ -0.26
SORT1-204ENST00000482236 B4GALNT3Q6L9W6 998 aa13.43□□□□□ -0.26
SORT1-204ENST00000482236 NKX2-3Q8TAU0 364 aa13.43□□□□□ -0.26
SORT1-204ENST00000482236 P2RX7Q99572 595 aaKnown RBP13.43□□□□□ -0.26
SORT1-204ENST00000482236 RPAP3Q9H6T3 665 aaPredicted RBP13.43□□□□□ -0.26
SORT1-204ENST00000482236 IVNS1ABPQ9Y6Y0 642 aa13.43□□□□□ -0.26
SORT1-204ENST00000482236 ZSWIM8A7E2V4 1837 aa13.43□□□□□ -0.26
SORT1-204ENST00000482236 SIPA1L1O43166 1804 aa13.43□□□□□ -0.26
SORT1-204ENST00000482236 LOC285556D6RIA3 1793 aa13.43□□□□□ -0.26
SORT1-204ENST00000482236 GPAA1O43292 621 aa13.42□□□□□ -0.26
SORT1-204ENST00000482236 CHGBP05060 677 aa13.42□□□□□ -0.26
SORT1-204ENST00000482236 ELNP15502 786 aa13.42□□□□□ -0.26
SORT1-204ENST00000482236 VCAM1P19320 739 aa13.42□□□□□ -0.26
SORT1-204ENST00000482236 EN2P19622 333 aaPredicted RBP13.42□□□□□ -0.26
SORT1-204ENST00000482236 CTGFP29279 349 aa13.42□□□□□ -0.26
SORT1-204ENST00000482236 ACER1Q8TDN7 264 aa13.42□□□□□ -0.26
SORT1-204ENST00000482236 CCDC17Q96LX7 622 aa13.42□□□□□ -0.26
SORT1-204ENST00000482236 KIAA1683Q9H0B3 1180 aa13.42□□□□□ -0.26
SORT1-204ENST00000482236 NAPBQ9H115 298 aa13.42□□□□□ -0.26
SORT1-204ENST00000482236 GABRQQ9UN88 632 aa13.42□□□□□ -0.26
SORT1-204ENST00000482236 CTDP1Q9Y5B0 961 aaPredicted RBP13.42□□□□□ -0.26
SORT1-204ENST00000482236 PHIPQ8WWQ0 1821 aa13.41□□□□□ -0.26
SORT1-204ENST00000482236 INHAP05111 366 aa13.41□□□□□ -0.26
SORT1-204ENST00000482236 CCL5P13501 91 aa13.41□□□□□ -0.26
SORT1-204ENST00000482236 AKR1B1P15121 316 aa13.41□□□□□ -0.26
SORT1-204ENST00000482236 MAPK4P31152 587 aa13.41□□□□□ -0.26
SORT1-204ENST00000482236 HOXA7P31268 230 aaPredicted RBP13.41□□□□□ -0.26
SORT1-204ENST00000482236 CDK8P49336 464 aa13.41□□□□□ -0.26
SORT1-204ENST00000482236 PLS1Q14651 629 aa13.41□□□□□ -0.26
SORT1-204ENST00000482236 C12orf60Q5U649 245 aa13.41□□□□□ -0.26
SORT1-204ENST00000482236 OTUD7AQ8TE49 926 aaPredicted RBP13.41□□□□□ -0.26
SORT1-204ENST00000482236 SOCS4Q8WXH5 440 aa13.41□□□□□ -0.26
SORT1-204ENST00000482236 NUDT12Q9BQG2 462 aa13.41□□□□□ -0.26
SORT1-204ENST00000482236 LNPKQ9C0E8 428 aa13.41□□□□□ -0.26
SORT1-204ENST00000482236 GOPCQ9HD26 462 aa13.41□□□□□ -0.26
SORT1-204ENST00000482236 EMILIN3Q9NT22 766 aa13.41□□□□□ -0.26
SORT1-204ENST00000482236 PTPRFP10586 1907 aa13.41□□□□□ -0.26
SORT1-204ENST00000482236 M0R2C6 588 aa13.4□□□□□ -0.26
SORT1-204ENST00000482236 ZKSCAN1P17029 563 aaPredicted RBP13.4□□□□□ -0.26
SORT1-204ENST00000482236 CYP2B6P20813 491 aa13.4□□□□□ -0.26
SORT1-204ENST00000482236 ERVK-9P63128 1117 aa13.4□□□□□ -0.26
SORT1-204ENST00000482236 ERVK-24P63145 666 aa13.4□□□□□ -0.26
SORT1-204ENST00000482236 EVX2Q03828 476 aa13.4□□□□□ -0.26
SORT1-204ENST00000482236 GABPAQ06546 454 aa13.4□□□□□ -0.26
SORT1-204ENST00000482236 HDAC1Q13547 482 aaPredicted RBP13.4□□□□□ -0.26
SORT1-204ENST00000482236 CTR9Q6PD62 1173 aa13.4□□□□□ -0.26
SORT1-204ENST00000482236 C16orf86Q6ZW13 317 aa13.4□□□□□ -0.26
SORT1-204ENST00000482236 CLEC10AQ8IUN9 316 aa13.4□□□□□ -0.26
SORT1-204ENST00000482236 ZNF444Q8N0Y2 327 aaPredicted RBP13.4□□□□□ -0.26
SORT1-204ENST00000482236 SPICE1Q8N0Z3 855 aa13.4□□□□□ -0.26
SORT1-204ENST00000482236 RILPL2Q969X0 211 aa13.4□□□□□ -0.26
SORT1-204ENST00000482236 STRBPQ96SI9 672 aaKnown RBP13.4□□□□□ -0.26
SORT1-204ENST00000482236 DDX60LQ5H9U9 1706 aaKnown RBP13.39□□□□□ -0.27
SORT1-204ENST00000482236 MYH7P12883 1935 aa13.39□□□□□ -0.27
SORT1-204ENST00000482236 FLOT1O75955 427 aa13.39□□□□□ -0.27
SORT1-204ENST00000482236 TFRCP02786 760 aaKnown RBP13.39□□□□□ -0.27
SORT1-204ENST00000482236 RGS2P41220 211 aa13.39□□□□□ -0.27
SORT1-204ENST00000482236 PDE4BQ07343 736 aa13.39□□□□□ -0.27
SORT1-204ENST00000482236 MTFR1Q15390 333 aa13.39□□□□□ -0.27
SORT1-204ENST00000482236 EXOC6Q8TAG9 804 aa13.39□□□□□ -0.27
SORT1-204ENST00000482236 LPAR1Q92633 364 aa13.39□□□□□ -0.27
SORT1-204ENST00000482236 OSBP2Q969R2 916 aa13.39□□□□□ -0.27
SORT1-204ENST00000482236 EVI5LQ96CN4 794 aa13.39□□□□□ -0.27
SORT1-204ENST00000482236 C12orf42Q96LP6 360 aa13.39□□□□□ -0.27
SORT1-204ENST00000482236 TOMM22Q9NS69 142 aa13.39□□□□□ -0.27
SORT1-204ENST00000482236 MORF4L1Q9UBU8 362 aa13.39□□□□□ -0.27
SORT1-204ENST00000482236 RABGAP1Q9Y3P9 1069 aa13.39□□□□□ -0.27
SORT1-204ENST00000482236 SUPT16HQ9Y5B9 1047 aaKnown RBP13.39□□□□□ -0.27
SORT1-204ENST00000482236 HMGCRP04035 888 aa13.38□□□□□ -0.27
SORT1-204ENST00000482236 TSPY3P0CV98 308 aa13.38□□□□□ -0.27
SORT1-204ENST00000482236 TSPY8P0CW00 308 aa13.38□□□□□ -0.27
SORT1-204ENST00000482236 IRF5Q13568 498 aa13.38□□□□□ -0.27
SORT1-204ENST00000482236 PRPF38BQ5VTL8 546 aaKnown RBP13.38□□□□□ -0.27
SORT1-204ENST00000482236 GIMAP6Q6P9H5 292 aa13.38□□□□□ -0.27
SORT1-204ENST00000482236 CATSPERGQ6ZRH7 1159 aa13.38□□□□□ -0.27
SORT1-204ENST00000482236 PLEKHH3Q7Z736 793 aa13.38□□□□□ -0.27
SORT1-204ENST00000482236 PI4K2BQ8TCG2 481 aa13.38□□□□□ -0.27
SORT1-204ENST00000482236 PXYLP1Q8TE99 480 aa13.38□□□□□ -0.27
SORT1-204ENST00000482236 UNC93B1Q9H1C4 597 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms