RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 USP17L20D6RJB6 530 aa18.4■□□□□ 0.54
CDK9-203ENST00000480353 RNF113AO15541 343 aaKnown RBP18.4■□□□□ 0.54
CDK9-203ENST00000480353 ADCY3O60266 1144 aa18.4■□□□□ 0.54
CDK9-203ENST00000480353 APPP05067 770 aa18.4■□□□□ 0.54
CDK9-203ENST00000480353 EN2P19622 333 aaPredicted RBP18.4■□□□□ 0.54
CDK9-203ENST00000480353 MX1P20591 662 aa18.4■□□□□ 0.54
CDK9-203ENST00000480353 FLT3LGP49771 235 aa18.4■□□□□ 0.54
CDK9-203ENST00000480353 HERVK_113P62684 666 aa18.4■□□□□ 0.54
CDK9-203ENST00000480353 GABPAQ06546 454 aa18.4■□□□□ 0.54
CDK9-203ENST00000480353 USP17L24Q0WX57 530 aa18.4■□□□□ 0.54
CDK9-203ENST00000480353 SEPT2Q15019 361 aa18.4■□□□□ 0.54
CDK9-203ENST00000480353 TMEM179Q6ZVK1 233 aa18.4■□□□□ 0.54
CDK9-203ENST00000480353 GPRC5AQ8NFJ5 357 aa18.4■□□□□ 0.54
CDK9-203ENST00000480353 APPBP2Q92624 585 aa18.4■□□□□ 0.54
CDK9-203ENST00000480353 DYNLL2Q96FJ2 89 aa18.4■□□□□ 0.54
CDK9-203ENST00000480353 P2RX7Q99572 595 aaKnown RBP18.4■□□□□ 0.54
CDK9-203ENST00000480353 PAGR1Q9BTK6 254 aa18.4■□□□□ 0.54
CDK9-203ENST00000480353 ARHGEF10LQ9HCE6 1279 aa18.4■□□□□ 0.54
CDK9-203ENST00000480353 EMILIN3Q9NT22 766 aa18.4■□□□□ 0.54
CDK9-203ENST00000480353 ARPP21Q9UBL0 812 aaPredicted RBP18.4■□□□□ 0.54
CDK9-203ENST00000480353 KIAA0100Q14667 2235 aaKnown RBP18.39■□□□□ 0.54
CDK9-203ENST00000480353 CHGBP05060 677 aa18.39■□□□□ 0.53
CDK9-203ENST00000480353 SLC44A5Q8NCS7 719 aa18.39■□□□□ 0.53
CDK9-203ENST00000480353 KIAA1683Q9H0B3 1180 aa18.39■□□□□ 0.53
CDK9-203ENST00000480353 SH2D4AQ9H788 454 aa18.39■□□□□ 0.53
CDK9-203ENST00000480353 DOCK3Q8IZD9 2030 aa18.39■□□□□ 0.53
CDK9-203ENST00000480353 GNAT2P19087 354 aa18.38■□□□□ 0.53
CDK9-203ENST00000480353 TDO2P48775 406 aa18.38■□□□□ 0.53
CDK9-203ENST00000480353 C12orf60Q5U649 245 aa18.38■□□□□ 0.53
CDK9-203ENST00000480353 NKX2-3Q8TAU0 364 aa18.38■□□□□ 0.53
CDK9-203ENST00000480353 ACER1Q8TDN7 264 aa18.38■□□□□ 0.53
CDK9-203ENST00000480353 C12orf42Q96LP6 360 aa18.38■□□□□ 0.53
CDK9-203ENST00000480353 CCDC17Q96LX7 622 aa18.38■□□□□ 0.53
CDK9-203ENST00000480353 RNF208Q9H0X6 261 aa18.38■□□□□ 0.53
CDK9-203ENST00000480353 RWDD1Q9H446 243 aaPredicted RBP18.38■□□□□ 0.53
CDK9-203ENST00000480353 CYP2D7A0A087X1C5 515 aa18.37■□□□□ 0.53
CDK9-203ENST00000480353 MINDY4BA8MYZ0 360 aa18.37■□□□□ 0.53
CDK9-203ENST00000480353 CDK8P49336 464 aa18.37■□□□□ 0.53
CDK9-203ENST00000480353 ATP2B2Q01814 1243 aa18.37■□□□□ 0.53
CDK9-203ENST00000480353 EVX2Q03828 476 aa18.37■□□□□ 0.53
CDK9-203ENST00000480353 HDAC1Q13547 482 aaPredicted RBP18.37■□□□□ 0.53
CDK9-203ENST00000480353 STRBPQ96SI9 672 aaKnown RBP18.37■□□□□ 0.53
CDK9-203ENST00000480353 MORF4L1Q9UBU8 362 aa18.37■□□□□ 0.53
CDK9-203ENST00000480353 GPAA1O43292 621 aa18.36■□□□□ 0.53
CDK9-203ENST00000480353 CCL5P13501 91 aa18.36■□□□□ 0.53
CDK9-203ENST00000480353 ELNP15502 786 aa18.36■□□□□ 0.53
CDK9-203ENST00000480353 VCAM1P19320 739 aa18.36■□□□□ 0.53
CDK9-203ENST00000480353 MAPK4P31152 587 aa18.36■□□□□ 0.53
CDK9-203ENST00000480353 CCNA1P78396 465 aa18.36■□□□□ 0.53
CDK9-203ENST00000480353 ICA1Q05084 483 aa18.36■□□□□ 0.53
CDK9-203ENST00000480353 IRF5Q13568 498 aa18.36■□□□□ 0.53
CDK9-203ENST00000480353 MTFR1Q15390 333 aa18.36■□□□□ 0.53
CDK9-203ENST00000480353 WDR78Q5VTH9 848 aa18.36■□□□□ 0.53
CDK9-203ENST00000480353 CTR9Q6PD62 1173 aa18.36■□□□□ 0.53
CDK9-203ENST00000480353 C16orf86Q6ZW13 317 aa18.36■□□□□ 0.53
CDK9-203ENST00000480353 STK11IPQ8N1F8 1099 aa18.36■□□□□ 0.53
CDK9-203ENST00000480353 OTUD7AQ8TE49 926 aaPredicted RBP18.36■□□□□ 0.53
CDK9-203ENST00000480353 PXYLP1Q8TE99 480 aa18.36■□□□□ 0.53
CDK9-203ENST00000480353 OSBP2Q969R2 916 aa18.36■□□□□ 0.53
CDK9-203ENST00000480353 NACAP1Q9BZK3 213 aa18.36■□□□□ 0.53
CDK9-203ENST00000480353 TANGO6Q9C0B7 1094 aa18.36■□□□□ 0.53
CDK9-203ENST00000480353 RPAP3Q9H6T3 665 aaPredicted RBP18.36■□□□□ 0.53
CDK9-203ENST00000480353 MKNK2Q9HBH9 465 aa18.36■□□□□ 0.53
CDK9-203ENST00000480353 RAD21O60216 631 aa18.35■□□□□ 0.53
CDK9-203ENST00000480353 AKR1B1P15121 316 aa18.35■□□□□ 0.53
CDK9-203ENST00000480353 GUCY1A2P33402 732 aa18.35■□□□□ 0.53
CDK9-203ENST00000480353 ERVK-9P63128 1117 aa18.35■□□□□ 0.53
CDK9-203ENST00000480353 ERVK-24P63145 666 aa18.35■□□□□ 0.53
CDK9-203ENST00000480353 GIMAP6Q6P9H5 292 aa18.35■□□□□ 0.53
CDK9-203ENST00000480353 PI4K2BQ8TCG2 481 aa18.35■□□□□ 0.53
CDK9-203ENST00000480353 ZNF287Q9HBT7 754 aa18.35■□□□□ 0.53
CDK9-203ENST00000480353 HTTP42858 3142 aa18.34■□□□□ 0.53
CDK9-203ENST00000480353 PDE4DIPQ5VU43 2346 aa18.34■□□□□ 0.53
CDK9-203ENST00000480353 INHAP05111 366 aa18.34■□□□□ 0.53
CDK9-203ENST00000480353 CATSPERGQ6ZRH7 1159 aa18.34■□□□□ 0.53
CDK9-203ENST00000480353 SOCS4Q8WXH5 440 aa18.34■□□□□ 0.53
CDK9-203ENST00000480353 NUDT12Q9BQG2 462 aa18.34■□□□□ 0.53
CDK9-203ENST00000480353 RABGAP1Q9Y3P9 1069 aa18.34■□□□□ 0.53
CDK9-203ENST00000480353 GSG1L2A8MUP6 293 aa18.33■□□□□ 0.52
CDK9-203ENST00000480353 M0R2C6 588 aa18.33■□□□□ 0.52
CDK9-203ENST00000480353 PRPF38BQ5VTL8 546 aaKnown RBP18.33■□□□□ 0.52
CDK9-203ENST00000480353 SAMD1Q6SPF0 538 aaPredicted RBP18.33■□□□□ 0.52
CDK9-203ENST00000480353 TXNRD2Q9NNW7 524 aa18.33■□□□□ 0.52
CDK9-203ENST00000480353 RBPJLQ9UBG7 517 aa18.33■□□□□ 0.52
CDK9-203ENST00000480353 TNRC18O15417 2968 aaPredicted RBP18.33■□□□□ 0.52
CDK9-203ENST00000480353 CENPFP49454 3210 aa18.32■□□□□ 0.52
CDK9-203ENST00000480353 PATL2C9JE40 543 aaKnown RBP18.32■□□□□ 0.52
CDK9-203ENST00000480353 PEX10O60683 326 aa18.32■□□□□ 0.52
CDK9-203ENST00000480353 SLC3A2P08195 630 aaKnown RBP18.32■□□□□ 0.52
CDK9-203ENST00000480353 CYP2B6P20813 491 aa18.32■□□□□ 0.52
CDK9-203ENST00000480353 SBK1Q52WX2 424 aa18.32■□□□□ 0.52
CDK9-203ENST00000480353 B4GALNT3Q6L9W6 998 aa18.32■□□□□ 0.52
CDK9-203ENST00000480353 LPAR1Q92633 364 aa18.32■□□□□ 0.52
CDK9-203ENST00000480353 EVI5LQ96CN4 794 aa18.32■□□□□ 0.52
CDK9-203ENST00000480353 NAPBQ9H115 298 aa18.32■□□□□ 0.52
CDK9-203ENST00000480353 UNC93B1Q9H1C4 597 aa18.32■□□□□ 0.52
CDK9-203ENST00000480353 KANSL2Q9H9L4 492 aa18.32■□□□□ 0.52
CDK9-203ENST00000480353 GOPCQ9HD26 462 aa18.32■□□□□ 0.52
CDK9-203ENST00000480353 HOXC10Q9NYD6 342 aa18.32■□□□□ 0.52
CDK9-203ENST00000480353 IVNS1ABPQ9Y6Y0 642 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms