RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 A0A0G2JLL6 359 aaPredicted RBP12.24□□□□□ -0.45
HDAC6-222ENST00000478095 CXCL11O14625 94 aa12.24□□□□□ -0.45
HDAC6-222ENST00000478095 CA12O43570 354 aa12.24□□□□□ -0.45
HDAC6-222ENST00000478095 CHRM1P11229 460 aaPredicted RBP12.24□□□□□ -0.45
HDAC6-222ENST00000478095 GUCY1A2P33402 732 aa12.24□□□□□ -0.45
HDAC6-222ENST00000478095 LBX1P52954 281 aa12.24□□□□□ -0.45
HDAC6-222ENST00000478095 MFAP1P55081 439 aaKnown RBP12.24□□□□□ -0.45
HDAC6-222ENST00000478095 CTDSPL2Q05D32 466 aa12.24□□□□□ -0.45
HDAC6-222ENST00000478095 PPARAQ07869 468 aa12.24□□□□□ -0.45
HDAC6-222ENST00000478095 MTMR2Q13614 643 aa12.24□□□□□ -0.45
HDAC6-222ENST00000478095 MOGSQ13724 837 aa12.24□□□□□ -0.45
HDAC6-222ENST00000478095 SEPT2Q15019 361 aa12.24□□□□□ -0.45
HDAC6-222ENST00000478095 BMP2KLQ5H9B9 411 aa12.24□□□□□ -0.45
HDAC6-222ENST00000478095 PRRT2Q7Z6L0 340 aaPredicted RBP12.24□□□□□ -0.45
HDAC6-222ENST00000478095 ZNF280CQ8ND82 737 aa12.24□□□□□ -0.45
HDAC6-222ENST00000478095 ROBO3Q96MS0 1386 aa12.24□□□□□ -0.45
HDAC6-222ENST00000478095 R3HDMLQ9H3Y0 253 aa12.24□□□□□ -0.45
HDAC6-222ENST00000478095 MKNK2Q9HBH9 465 aa12.24□□□□□ -0.45
HDAC6-222ENST00000478095 AS3MTQ9HBK9 375 aa12.24□□□□□ -0.45
HDAC6-222ENST00000478095 SAGE1Q9NXZ1 904 aa12.24□□□□□ -0.45
HDAC6-222ENST00000478095 FGAP02671 866 aa12.23□□□□□ -0.45
HDAC6-222ENST00000478095 HMGCS2P54868 508 aa12.23□□□□□ -0.45
HDAC6-222ENST00000478095 HAND2P61296 217 aa12.23□□□□□ -0.45
HDAC6-222ENST00000478095 ZYXQ15942 572 aaKnown RBP12.23□□□□□ -0.45
HDAC6-222ENST00000478095 OTUD7BQ6GQQ9 843 aa12.23□□□□□ -0.45
HDAC6-222ENST00000478095 GINM1Q9NU53 330 aa12.23□□□□□ -0.45
HDAC6-222ENST00000478095 RAD50Q92878 1312 aa12.22□□□□□ -0.45
HDAC6-222ENST00000478095 PDHXO00330 501 aa12.22□□□□□ -0.45
HDAC6-222ENST00000478095 ALDH1A1P00352 501 aa12.22□□□□□ -0.45
HDAC6-222ENST00000478095 RASA1P20936 1047 aa12.22□□□□□ -0.45
HDAC6-222ENST00000478095 CRHR2Q13324 411 aa12.22□□□□□ -0.45
HDAC6-222ENST00000478095 TAF1CQ15572 869 aaPredicted RBP12.22□□□□□ -0.45
HDAC6-222ENST00000478095 ALX1Q15699 326 aa12.22□□□□□ -0.45
HDAC6-222ENST00000478095 GPAT2Q6NUI2 795 aa12.22□□□□□ -0.45
HDAC6-222ENST00000478095 TMEM179Q6ZVK1 233 aa12.22□□□□□ -0.45
HDAC6-222ENST00000478095 ACER1Q8TDN7 264 aa12.22□□□□□ -0.45
HDAC6-222ENST00000478095 RUFY2Q8WXA3 655 aa12.22□□□□□ -0.45
HDAC6-222ENST00000478095 FEZ1Q99689 392 aa12.22□□□□□ -0.45
HDAC6-222ENST00000478095 WDR18Q9BV38 432 aa12.22□□□□□ -0.45
HDAC6-222ENST00000478095 INCENPQ9NQS7 918 aa12.22□□□□□ -0.45
HDAC6-222ENST00000478095 TACC3Q9Y6A5 838 aa12.22□□□□□ -0.45
HDAC6-222ENST00000478095 MYH1P12882 1939 aa12.21□□□□□ -0.45
HDAC6-222ENST00000478095 DOCK1Q14185 1865 aa12.21□□□□□ -0.45
HDAC6-222ENST00000478095 USP17L10C9JJH3 530 aa12.21□□□□□ -0.45
HDAC6-222ENST00000478095 SLC3A2P08195 630 aaKnown RBP12.21□□□□□ -0.45
HDAC6-222ENST00000478095 BACE1P56817 501 aa12.21□□□□□ -0.45
HDAC6-222ENST00000478095 ATP2B2Q01814 1243 aa12.21□□□□□ -0.45
HDAC6-222ENST00000478095 ICA1Q05084 483 aa12.21□□□□□ -0.45
HDAC6-222ENST00000478095 TREML2Q5T2D2 321 aa12.21□□□□□ -0.45
HDAC6-222ENST00000478095 FASTKD5Q7L8L6 764 aaKnown RBP12.21□□□□□ -0.45
HDAC6-222ENST00000478095 ANKRD23Q86SG2 305 aa12.21□□□□□ -0.45
HDAC6-222ENST00000478095 CCDC17Q96LX7 622 aa12.21□□□□□ -0.45
HDAC6-222ENST00000478095 TBC1D2Q9BYX2 928 aa12.21□□□□□ -0.45
HDAC6-222ENST00000478095 TAOK2Q9UL54 1235 aa12.21□□□□□ -0.45
HDAC6-222ENST00000478095 ZMYM6O95789 1325 aa12.2□□□□□ -0.46
HDAC6-222ENST00000478095 A0A1W2PRG0 241 aa12.2□□□□□ -0.46
HDAC6-222ENST00000478095 SGSM2O43147 1006 aa12.2□□□□□ -0.46
HDAC6-222ENST00000478095 CYP2C8P10632 490 aa12.2□□□□□ -0.46
HDAC6-222ENST00000478095 PTH1RQ03431 593 aa12.2□□□□□ -0.46
HDAC6-222ENST00000478095 PDE4BQ07343 736 aa12.2□□□□□ -0.46
HDAC6-222ENST00000478095 FAM47AQ5JRC9 791 aa12.2□□□□□ -0.46
HDAC6-222ENST00000478095 TBC1D10CQ8IV04 446 aa12.2□□□□□ -0.46
HDAC6-222ENST00000478095 ZNF444Q8N0Y2 327 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-222ENST00000478095 DSCC1Q9BVC3 393 aa12.2□□□□□ -0.46
HDAC6-222ENST00000478095 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.2□□□□□ -0.46
HDAC6-222ENST00000478095 NBPF3Q9H094 633 aa12.2□□□□□ -0.46
HDAC6-222ENST00000478095 ZNF287Q9HBT7 754 aa12.2□□□□□ -0.46
HDAC6-222ENST00000478095 TOMM22Q9NS69 142 aa12.2□□□□□ -0.46
HDAC6-222ENST00000478095 EMILIN3Q9NT22 766 aa12.2□□□□□ -0.46
HDAC6-222ENST00000478095 TMOD4Q9NZQ9 345 aa12.2□□□□□ -0.46
HDAC6-222ENST00000478095 ANAPC4Q9UJX5 808 aa12.2□□□□□ -0.46
HDAC6-222ENST00000478095 AGTPBP1Q9UPW5 1226 aa12.2□□□□□ -0.46
HDAC6-222ENST00000478095 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.2□□□□□ -0.46
HDAC6-222ENST00000478095 BAZ2AQ9UIF9 1905 aaKnown RBP12.19□□□□□ -0.46
HDAC6-222ENST00000478095 GPR25O00155 361 aa12.19□□□□□ -0.46
HDAC6-222ENST00000478095 TIE1P35590 1138 aa12.19□□□□□ -0.46
HDAC6-222ENST00000478095 TFAP4Q01664 338 aa12.19□□□□□ -0.46
HDAC6-222ENST00000478095 SH3D19Q5HYK7 790 aa12.19□□□□□ -0.46
HDAC6-222ENST00000478095 RRP12Q5JTH9 1297 aaKnown RBP12.19□□□□□ -0.46
HDAC6-222ENST00000478095 ASTLQ6HA08 431 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-222ENST00000478095 ZNF467Q7Z7K2 595 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-222ENST00000478095 SIAH1Q8IUQ4 282 aa12.19□□□□□ -0.46
HDAC6-222ENST00000478095 PROCA1Q8NCQ7 364 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-222ENST00000478095 ESYT1Q9BSJ8 1104 aa12.19□□□□□ -0.46
HDAC6-222ENST00000478095 ZFYVE28Q9HCC9 887 aa12.19□□□□□ -0.46
HDAC6-222ENST00000478095 C19orf81C9J6K1 198 aa12.18□□□□□ -0.46
HDAC6-222ENST00000478095 ZNF213O14771 459 aa12.18□□□□□ -0.46
HDAC6-222ENST00000478095 ATMINO43313 823 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-222ENST00000478095 RANBP6O60518 1105 aaKnown RBP12.18□□□□□ -0.46
HDAC6-222ENST00000478095 CDC45O75419 566 aa12.18□□□□□ -0.46
HDAC6-222ENST00000478095 ECM2O94769 699 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-222ENST00000478095 TSPY3P0CV98 308 aa12.18□□□□□ -0.46
HDAC6-222ENST00000478095 TSPY8P0CW00 308 aa12.18□□□□□ -0.46
HDAC6-222ENST00000478095 EEF2P13639 858 aaKnown RBP12.18□□□□□ -0.46
HDAC6-222ENST00000478095 COL13A1Q5TAT6 717 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-222ENST00000478095 USP17L2Q6R6M4 530 aa12.18□□□□□ -0.46
HDAC6-222ENST00000478095 ZNF296Q8WUU4 475 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-222ENST00000478095 PARK7Q99497 189 aaKnown RBP12.18□□□□□ -0.46
HDAC6-222ENST00000478095 CFHR5Q9BXR6 569 aa12.18□□□□□ -0.46
HDAC6-222ENST00000478095 KIAA1683Q9H0B3 1180 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms