RNA–Protein interactions for RNA: ENST00000476472.5

ANKRD28-209, Transcript of ankyrin repeat domain 28, humanhuman

TSL 4

Gene ANKRD28, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-209ENST00000476472 PDE3BQ13370 1112 aa4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 DYNC1I2Q13409 638 aaKnown RBP4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 BTG3Q14201 252 aaPredicted RBP4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 SMC1AQ14683 1233 aaKnown RBP4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 ACAP1Q15027 740 aa4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 SPATA1Q5VX52 437 aa4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 ADALQ6DHV7 355 aa4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 CAPRIN2Q6IMN6 1127 aaKnown RBP4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 BRAPQ7Z569 592 aa4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 HOOK3Q86VS8 718 aa4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 PPFIBP1Q86W92 1011 aa4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 BPHLQ86WA6 291 aaPredicted RBP4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 SNX32Q86XE0 403 aa4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 GAS2L3Q86XJ1 694 aa4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 LINC00469Q8N7U9 141 aa4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 SPC24Q8NBT2 197 aa4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 NUP133Q8WUM0 1156 aa4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 ARHGEF2Q92974 986 aaKnown RBP4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 RELTQ969Z4 430 aa4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 CEP95Q96GE4 821 aa4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 SLC39A13Q96H72 371 aa4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 NLRP3Q96P20 1036 aa4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 MOGAT1Q96PD6 335 aa4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.26□□□□□ -1.735e-6■■■□□ 16.3
ANKRD28-209ENST00000476472 ZBED2Q9BTP6 218 aa4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 SEMA4AQ9H3S1 761 aa4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 DDX21Q9NR30 783 aaKnown RBP eCLIP4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 PICK1Q9NRD5 415 aa4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 PDRG1Q9NUG6 133 aa4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 TCP11L1Q9NUJ3 509 aa4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 TUBGCP4Q9UGJ1 667 aa4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 MTUS1Q9ULD2 1270 aa4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 CEP131Q9UPN4 1083 aa4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 KTN1Q86UP2 1357 aaKnown RBP4.26□□□□□ -1.73
ANKRD28-209ENST00000476472 GAKO14976 1311 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 MAPK8IP3Q9UPT6 1336 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 NDUFAB1O14561 156 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 CHD1O14646 1710 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 LIN7AO14910 233 aaPredicted RBP4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 GTPBP6O43824 516 aaPredicted RBP4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 TSPAN1O60635 241 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 SNX2O60749 519 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 ZNF254O75437 659 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 SKAP2O75563 359 aaPredicted RBP4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 MBD4O95243 580 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 PENKP01210 267 aaPredicted RBP4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 CYP1A2P05177 515 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 S100A6P06703 90 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 ALOX15P16050 662 aaPredicted RBP4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 ENDOUP21128 410 aaKnown RBP4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 WEE1P30291 646 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 PDE6BP35913 854 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 COPAP53621 1224 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 CLNS1AP54105 237 aaKnown RBP4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 AP2B1P63010 937 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 TUBA4AP68366 448 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 BASP1P80723 227 aaKnown RBP4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 AMPD3Q01432 767 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 SCRN1Q12765 414 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 USP4Q13107 963 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 STK3Q13188 491 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 CUL3Q13618 768 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 SF3B3Q15393 1217 aaKnown RBP4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 TRIM71Q2Q1W2 868 aaKnown RBP4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 LRRFIP1Q32MZ4 808 aaKnown RBP4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 TMEM95Q3KNT9 176 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 MAP7D1Q3KQU3 841 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 ARMC4Q5T2S8 1044 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 C10orf62Q5T681 223 aaPredicted RBP4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 NBPF14Q5TI25 921 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 UNC5DQ6UXZ4 953 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 RUFY3Q7L099 469 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 TMC6Q7Z403 805 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 ZNF804AQ7Z570 1209 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 NANOGNBQ7Z5D8 188 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 RAB11FIP4Q86YS3 637 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 NPAS4Q8IUM7 802 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 CCDC50Q8IVM0 306 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 WDR75Q8IWA0 830 aaKnown RBP4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 LRRC43Q8N309 656 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 CARNMT1Q8N4J0 409 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 GIMAP8Q8ND71 665 aaPredicted RBP4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 FLCNQ8NFG4 579 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 LILRB1Q8NHL6 650 aaPredicted RBP4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 PPP1R14CQ8TAE6 165 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 MAGEC3Q8TD91 643 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 SLC16A10Q8TF71 515 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 TSC1Q92574 1164 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 CDKL2Q92772 493 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 C1orf74Q96LT6 269 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 MIA2Q96PC5 1412 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 CTAGE1Q96RT6 745 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 UQCC2Q9BRT2 126 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 SRRTQ9BXP5 876 aaKnown RBP4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 UPF3BQ9BZI7 483 aaKnown RBP4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 CCDC113Q9H0I3 377 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 PARVGQ9HBI0 331 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 RIC8AQ9NPQ8 531 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 HELLSQ9NRZ9 838 aa4.25□□□□□ -1.73
ANKRD28-209ENST00000476472 AIPL1Q9NZN9 384 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms