RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 WDR18Q9BV38 432 aa12.79□□□□□ -0.36
CDHR3-209ENST00000472116 MTIF3Q9H2K0 278 aaKnown RBP12.79□□□□□ -0.36
CDHR3-209ENST00000472116 RABGAP1Q9Y3P9 1069 aa12.79□□□□□ -0.36
CDHR3-209ENST00000472116 NDUFB9Q9Y6M9 179 aa12.79□□□□□ -0.36
CDHR3-209ENST00000472116 RFX7Q2KHR2 1363 aa12.79□□□□□ -0.36
CDHR3-209ENST00000472116 CACNA1AO00555 2505 aa12.79□□□□□ -0.36
CDHR3-209ENST00000472116 PRRC2BQ5JSZ5 2229 aaKnown RBP12.78□□□□□ -0.36
CDHR3-209ENST00000472116 DCDC2CA8MYV0 355 aa12.78□□□□□ -0.36
CDHR3-209ENST00000472116 USP17L10C9JJH3 530 aa12.78□□□□□ -0.36
CDHR3-209ENST00000472116 F6X3S4 739 aa12.78□□□□□ -0.36
CDHR3-209ENST00000472116 APBB1O00213 710 aa12.78□□□□□ -0.36
CDHR3-209ENST00000472116 HOXC6P09630 235 aa12.78□□□□□ -0.36
CDHR3-209ENST00000472116 BTDP43251 543 aa12.78□□□□□ -0.36
CDHR3-209ENST00000472116 LRRC41Q15345 812 aa12.78□□□□□ -0.36
CDHR3-209ENST00000472116 DPP9Q86TI2 863 aa12.78□□□□□ -0.36
CDHR3-209ENST00000472116 VGLL2Q8N8G2 317 aa12.78□□□□□ -0.36
CDHR3-209ENST00000472116 LPIN2Q92539 896 aa12.78□□□□□ -0.36
CDHR3-209ENST00000472116 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.78□□□□□ -0.36
CDHR3-209ENST00000472116 DDX4Q9NQI0 724 aaKnown RBP12.78□□□□□ -0.36
CDHR3-209ENST00000472116 DENND2AQ9ULE3 1009 aa12.78□□□□□ -0.36
CDHR3-209ENST00000472116 GAKO14976 1311 aa12.78□□□□□ -0.36
CDHR3-209ENST00000472116 SALL1Q9NSC2 1324 aa12.78□□□□□ -0.36
CDHR3-209ENST00000472116 GRXCR1A8MXD5 290 aa12.77□□□□□ -0.37
CDHR3-209ENST00000472116 ERC2O15083 957 aa12.77□□□□□ -0.37
CDHR3-209ENST00000472116 GTPBP6O43824 516 aaPredicted RBP12.77□□□□□ -0.37
CDHR3-209ENST00000472116 CSPP1Q1MSJ5 1256 aa12.77□□□□□ -0.37
CDHR3-209ENST00000472116 TRPV1Q8NER1 839 aa12.77□□□□□ -0.37
CDHR3-209ENST00000472116 TRIM34Q9BYJ4 488 aa12.77□□□□□ -0.37
CDHR3-209ENST00000472116 SLC5A4Q9NY91 659 aa12.77□□□□□ -0.37
CDHR3-209ENST00000472116 HERC5Q9UII4 1024 aaKnown RBP12.77□□□□□ -0.37
CDHR3-209ENST00000472116 COG5Q9UP83 839 aa12.77□□□□□ -0.37
CDHR3-209ENST00000472116 ZNFX1Q9P2E3 1918 aaKnown RBP12.77□□□□□ -0.37
CDHR3-209ENST00000472116 ZNF236Q9UL36 1845 aa12.76□□□□□ -0.37
CDHR3-209ENST00000472116 PRR33A8MZF0 331 aa12.76□□□□□ -0.37
CDHR3-209ENST00000472116 SEMA3EO15041 775 aa12.76□□□□□ -0.37
CDHR3-209ENST00000472116 ALDH1L1O75891 902 aa12.76□□□□□ -0.37
CDHR3-209ENST00000472116 FGFR2P21802 821 aa12.76□□□□□ -0.37
CDHR3-209ENST00000472116 GRB14Q14449 540 aa12.76□□□□□ -0.37
CDHR3-209ENST00000472116 PSRC1Q6PGN9 363 aaPredicted RBP12.76□□□□□ -0.37
CDHR3-209ENST00000472116 RNF180Q86T96 592 aa12.76□□□□□ -0.37
CDHR3-209ENST00000472116 NPLOC4Q8TAT6 608 aa12.76□□□□□ -0.37
CDHR3-209ENST00000472116 SUCLG2Q96I99 432 aa12.76□□□□□ -0.37
CDHR3-209ENST00000472116 UIMC1Q96RL1 719 aa12.76□□□□□ -0.37
CDHR3-209ENST00000472116 NKX2-4Q9H2Z4 354 aa12.76□□□□□ -0.37
CDHR3-209ENST00000472116 PHF24Q9UPV7 400 aa12.76□□□□□ -0.37
CDHR3-209ENST00000472116 TIMP1P01033 207 aa12.75□□□□□ -0.37
CDHR3-209ENST00000472116 OLFML2BQ68BL8 750 aa12.75□□□□□ -0.37
CDHR3-209ENST00000472116 SPTY2D1Q68D10 685 aaPredicted RBP12.75□□□□□ -0.37
CDHR3-209ENST00000472116 SLC4A10Q6U841 1118 aa12.75□□□□□ -0.37
CDHR3-209ENST00000472116 TMEM199Q8N511 208 aa12.75□□□□□ -0.37
CDHR3-209ENST00000472116 SRCIN1Q9C0H9 1055 aa12.75□□□□□ -0.37
CDHR3-209ENST00000472116 ABCF2Q9UG63 623 aa12.75□□□□□ -0.37
CDHR3-209ENST00000472116 MROH7-TTC4A0A0A0MT08 1334 aa12.74□□□□□ -0.37
CDHR3-209ENST00000472116 RARBP10826 455 aa12.74□□□□□ -0.37
CDHR3-209ENST00000472116 FAM47AQ5JRC9 791 aa12.74□□□□□ -0.37
CDHR3-209ENST00000472116 PPP2R2DQ66LE6 453 aa12.74□□□□□ -0.37
CDHR3-209ENST00000472116 MFSD5Q6N075 450 aa12.74□□□□□ -0.37
CDHR3-209ENST00000472116 USP17L2Q6R6M4 530 aa12.74□□□□□ -0.37
CDHR3-209ENST00000472116 TOX2Q96NM4 488 aa12.74□□□□□ -0.37
CDHR3-209ENST00000472116 BICC1Q9H694 974 aaKnown RBP12.74□□□□□ -0.37
CDHR3-209ENST00000472116 C11orf16Q9NQ32 467 aa12.74□□□□□ -0.37
CDHR3-209ENST00000472116 XPNPEP3Q9NQH7 507 aa12.74□□□□□ -0.37
CDHR3-209ENST00000472116 MROH7Q68CQ1 1323 aa12.73□□□□□ -0.37
CDHR3-209ENST00000472116 USP17L15C9J2P7 530 aa12.73□□□□□ -0.37
CDHR3-209ENST00000472116 USP17L13C9JLJ4 530 aa12.73□□□□□ -0.37
CDHR3-209ENST00000472116 USP17L11C9JVI0 530 aa12.73□□□□□ -0.37
CDHR3-209ENST00000472116 USP17L18D6R9N7 530 aa12.73□□□□□ -0.37
CDHR3-209ENST00000472116 USP17L22D6RA61 530 aa12.73□□□□□ -0.37
CDHR3-209ENST00000472116 USP17L17D6RBQ6 530 aa12.73□□□□□ -0.37
CDHR3-209ENST00000472116 USP17L19D6RCP7 530 aa12.73□□□□□ -0.37
CDHR3-209ENST00000472116 USP17L20D6RJB6 530 aa12.73□□□□□ -0.37
CDHR3-209ENST00000472116 PI4K2BG5E9Z4 385 aa12.73□□□□□ -0.37
CDHR3-209ENST00000472116 MAP4K4O95819 1239 aaPredicted RBP12.73□□□□□ -0.37
CDHR3-209ENST00000472116 NHLH1Q02575 133 aa12.73□□□□□ -0.37
CDHR3-209ENST00000472116 USP17L24Q0WX57 530 aa12.73□□□□□ -0.37
CDHR3-209ENST00000472116 TMEM240Q5SV17 173 aa12.73□□□□□ -0.37
CDHR3-209ENST00000472116 NUP133Q8WUM0 1156 aa12.73□□□□□ -0.37
CDHR3-209ENST00000472116 FAM163AQ96GL9 167 aaPredicted RBP12.73□□□□□ -0.37
CDHR3-209ENST00000472116 FEZ1Q99689 392 aa12.73□□□□□ -0.37
CDHR3-209ENST00000472116 KCNH6Q9H252 994 aa12.73□□□□□ -0.37
CDHR3-209ENST00000472116 STARD7Q9NQZ5 370 aa12.73□□□□□ -0.37
CDHR3-209ENST00000472116 GINM1Q9NU53 330 aa12.73□□□□□ -0.37
CDHR3-209ENST00000472116 PI4KBQ9UBF8 816 aa12.73□□□□□ -0.37
CDHR3-209ENST00000472116 ZNF521Q96K83 1311 aa12.72□□□□□ -0.37
CDHR3-209ENST00000472116 A0A1W2PQ45 241 aaPredicted RBP12.72□□□□□ -0.37
CDHR3-209ENST00000472116 A0A1W2PQY0 241 aa12.72□□□□□ -0.37
CDHR3-209ENST00000472116 STRNO43815 780 aa12.72□□□□□ -0.37
CDHR3-209ENST00000472116 FAAP100Q0VG06 881 aa12.72□□□□□ -0.37
CDHR3-209ENST00000472116 ANKRD33Q7Z3H0 272 aa12.72□□□□□ -0.37
CDHR3-209ENST00000472116 CRACR2BQ8N4Y2 399 aaPredicted RBP12.72□□□□□ -0.37
CDHR3-209ENST00000472116 TLL1O43897 1013 aa12.71□□□□□ -0.37
CDHR3-209ENST00000472116 LDHCP07864 332 aa12.71□□□□□ -0.37
CDHR3-209ENST00000472116 ADORA2AP29274 412 aa12.71□□□□□ -0.37
CDHR3-209ENST00000472116 EVX2Q03828 476 aa12.71□□□□□ -0.37
CDHR3-209ENST00000472116 RRP1BQ14684 758 aaKnown RBP12.71□□□□□ -0.37
CDHR3-209ENST00000472116 ATP2B3Q16720 1220 aa12.71□□□□□ -0.37
CDHR3-209ENST00000472116 RABL6Q3YEC7 729 aaPredicted RBP12.71□□□□□ -0.37
CDHR3-209ENST00000472116 RASIP1Q5U651 963 aa12.71□□□□□ -0.37
CDHR3-209ENST00000472116 ZNF365Q70YC5 407 aa12.71□□□□□ -0.37
CDHR3-209ENST00000472116 KLHDC4Q8TBB5 520 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms