RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 F8W735 103 aaPredicted RBP8.2□□□□□ -1.1
CKS1B-204ENST00000471245 PLCG1P19174 1290 aa8.2□□□□□ -1.1
CKS1B-204ENST00000471245 ID3Q02535 119 aa8.2□□□□□ -1.1
CKS1B-204ENST00000471245 OVOS1Q6IE37 1185 aa8.2□□□□□ -1.1
CKS1B-204ENST00000471245 Q6ZS46 218 aa8.2□□□□□ -1.1
CKS1B-204ENST00000471245 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.2□□□□□ -1.1
CKS1B-204ENST00000471245 TXNRD3Q86VQ6 643 aa8.2□□□□□ -1.1
CKS1B-204ENST00000471245 TMPRSS13Q9BYE2 586 aa8.2□□□□□ -1.1
CKS1B-204ENST00000471245 WNT10AQ9GZT5 417 aa8.2□□□□□ -1.1
CKS1B-204ENST00000471245 ANTXR1Q9H6X2 564 aa8.2□□□□□ -1.1
CKS1B-204ENST00000471245 AKTIPQ9H8T0 292 aa8.2□□□□□ -1.1
CKS1B-204ENST00000471245 USP21Q9UK80 565 aa8.2□□□□□ -1.1
CKS1B-204ENST00000471245 ABCA9Q8IUA7 1624 aa8.2□□□□□ -1.1
CKS1B-204ENST00000471245 A0A1W2PQH9 124 aa8.19□□□□□ -1.1
CKS1B-204ENST00000471245 FANCGO15287 622 aa8.19□□□□□ -1.1
CKS1B-204ENST00000471245 TMPRSS2O15393 492 aa8.19□□□□□ -1.1
CKS1B-204ENST00000471245 HMGB1P09429 215 aaKnown RBP8.19□□□□□ -1.1
CKS1B-204ENST00000471245 GRK4P32298 578 aa8.19□□□□□ -1.1
CKS1B-204ENST00000471245 GATA4P43694 442 aa8.19□□□□□ -1.1
CKS1B-204ENST00000471245 RASGRF1Q13972 1273 aa8.19□□□□□ -1.1
CKS1B-204ENST00000471245 CDCP2Q5VXM1 449 aa8.19□□□□□ -1.1
CKS1B-204ENST00000471245 LARP1BQ659C4 914 aaKnown RBP8.19□□□□□ -1.1
CKS1B-204ENST00000471245 INTS3Q68E01 1043 aaKnown RBP8.19□□□□□ -1.1
CKS1B-204ENST00000471245 RUFY4Q6ZNE9 571 aa8.19□□□□□ -1.1
CKS1B-204ENST00000471245 KIAA1211Q6ZU35 1233 aa8.19□□□□□ -1.1
CKS1B-204ENST00000471245 NLRC3Q7RTR2 1065 aa8.19□□□□□ -1.1
CKS1B-204ENST00000471245 TTC6Q86TZ1 520 aa8.19□□□□□ -1.1
CKS1B-204ENST00000471245 UBASH3BQ8TF42 649 aa8.19□□□□□ -1.1
CKS1B-204ENST00000471245 WFDC12Q8WWY7 111 aa8.19□□□□□ -1.1
CKS1B-204ENST00000471245 CNNM2Q9H8M5 875 aa8.19□□□□□ -1.1
CKS1B-204ENST00000471245 RAD18Q9NS91 495 aa8.19□□□□□ -1.1
CKS1B-204ENST00000471245 HIF3AQ9Y2N7 669 aa8.19□□□□□ -1.1
CKS1B-204ENST00000471245 MRPL42Q9Y6G3 142 aaKnown RBP8.19□□□□□ -1.1
CKS1B-204ENST00000471245 FAM221BA6H8Z2 402 aa8.18□□□□□ -1.1
CKS1B-204ENST00000471245 SLC22A31A6NKX4 558 aa8.18□□□□□ -1.1
CKS1B-204ENST00000471245 ENPP3O14638 875 aa8.18□□□□□ -1.1
CKS1B-204ENST00000471245 TNFRSF10CO14798 259 aa8.18□□□□□ -1.1
CKS1B-204ENST00000471245 PGRP06401 933 aa8.18□□□□□ -1.1
CKS1B-204ENST00000471245 NME1P15531 152 aaKnown RBP8.18□□□□□ -1.1
CKS1B-204ENST00000471245 NCLP19338 710 aaKnown RBP8.18□□□□□ -1.1
CKS1B-204ENST00000471245 PPP2R5EQ16537 467 aa8.18□□□□□ -1.1
CKS1B-204ENST00000471245 ZBTB37Q5TC79 503 aa8.18□□□□□ -1.1
CKS1B-204ENST00000471245 EGFLAMQ63HQ2 1017 aa8.18□□□□□ -1.1
CKS1B-204ENST00000471245 C12orf40Q86WS4 652 aa8.18□□□□□ -1.1
CKS1B-204ENST00000471245 ATG4CQ96DT6 458 aa8.18□□□□□ -1.1
CKS1B-204ENST00000471245 SUGCTQ9HAC7 445 aa8.18□□□□□ -1.1
CKS1B-204ENST00000471245 CRIM1Q9NZV1 1036 aa8.18□□□□□ -1.1
CKS1B-204ENST00000471245 RAPGEF2Q9Y4G8 1499 aa8.18□□□□□ -1.1
CKS1B-204ENST00000471245 PDPK1O15530 556 aa8.17□□□□□ -1.1
CKS1B-204ENST00000471245 DNAJA2O60884 412 aa8.17□□□□□ -1.1
CKS1B-204ENST00000471245 HSP90B1P14625 803 aaKnown RBP8.17□□□□□ -1.1
CKS1B-204ENST00000471245 HSD3B2P26439 372 aa8.17□□□□□ -1.1
CKS1B-204ENST00000471245 ETF1P62495 437 aaKnown RBP8.17□□□□□ -1.1
CKS1B-204ENST00000471245 DZIP1LQ8IYY4 767 aaKnown RBP8.17□□□□□ -1.1
CKS1B-204ENST00000471245 RUSC1Q9BVN2 902 aa8.17□□□□□ -1.1
CKS1B-204ENST00000471245 RNF208Q9H0X6 261 aa8.17□□□□□ -1.1
CKS1B-204ENST00000471245 ATXN3LQ9H3M9 355 aa8.17□□□□□ -1.1
CKS1B-204ENST00000471245 DISP3Q9P2K9 1392 aa8.17□□□□□ -1.1
CKS1B-204ENST00000471245 RICTORQ6R327 1708 aa8.17□□□□□ -1.1
CKS1B-204ENST00000471245 SIGLEC1Q9BZZ2 1709 aa8.17□□□□□ -1.1
CKS1B-204ENST00000471245 MSTNO14793 375 aa8.16□□□□□ -1.1
CKS1B-204ENST00000471245 WISP1O95388 367 aa8.16□□□□□ -1.1
CKS1B-204ENST00000471245 GJB6O95452 261 aa8.16□□□□□ -1.1
CKS1B-204ENST00000471245 ACRP10323 421 aa8.16□□□□□ -1.1
CKS1B-204ENST00000471245 NOS3P29474 1203 aa8.16□□□□□ -1.1
CKS1B-204ENST00000471245 IFRD2Q12894 506 aaPredicted RBP8.16□□□□□ -1.1
CKS1B-204ENST00000471245 SPATA31D1Q6ZQQ2 1576 aa8.16□□□□□ -1.1
CKS1B-204ENST00000471245 SMG8Q8ND04 991 aaKnown RBP8.16□□□□□ -1.1
CKS1B-204ENST00000471245 RNF214Q8ND24 703 aa8.16□□□□□ -1.1
CKS1B-204ENST00000471245 ARHGEF40Q8TER5 1519 aa8.16□□□□□ -1.1
CKS1B-204ENST00000471245 ACSF2Q96CM8 615 aaPredicted RBP8.16□□□□□ -1.1
CKS1B-204ENST00000471245 RNPC3Q96LT9 517 aaKnown RBP8.16□□□□□ -1.1
CKS1B-204ENST00000471245 SSBP4Q9BWG4 385 aaPredicted RBP8.16□□□□□ -1.1
CKS1B-204ENST00000471245 PHAXQ9H814 394 aaKnown RBP8.16□□□□□ -1.1
CKS1B-204ENST00000471245 CYP4F12Q9HCS2 524 aa8.16□□□□□ -1.1
CKS1B-204ENST00000471245 ST7Q9NRC1 585 aa8.16□□□□□ -1.1
CKS1B-204ENST00000471245 PPP1R9AQ9ULJ8 1098 aa8.16□□□□□ -1.1
CKS1B-204ENST00000471245 CSADQ9Y600 493 aa8.16□□□□□ -1.1
CKS1B-204ENST00000471245 FER1L4A9Z1Z3 1794 aa8.15□□□□□ -1.1
CKS1B-204ENST00000471245 CCDC85CA6NKD9 419 aa8.15□□□□□ -1.1
CKS1B-204ENST00000471245 RAPGEF3O95398 923 aa8.15□□□□□ -1.1
CKS1B-204ENST00000471245 ADH5P11766 374 aa8.15□□□□□ -1.1
CKS1B-204ENST00000471245 NTF4P34130 210 aa8.15□□□□□ -1.1
CKS1B-204ENST00000471245 CCNFP41002 786 aa8.15□□□□□ -1.1
CKS1B-204ENST00000471245 YARSP54577 528 aaKnown RBP8.15□□□□□ -1.1
CKS1B-204ENST00000471245 HSPA2P54652 639 aa8.15□□□□□ -1.1
CKS1B-204ENST00000471245 AKAP4Q5JQC9 854 aa8.15□□□□□ -1.1
CKS1B-204ENST00000471245 PPM1JQ5JR12 505 aa8.15□□□□□ -1.1
CKS1B-204ENST00000471245 NUTM2GQ5VZR2 741 aa8.15□□□□□ -1.1
CKS1B-204ENST00000471245 ANKRD34AQ69YU3 496 aa8.15□□□□□ -1.1
CKS1B-204ENST00000471245 ACAD11Q709F0 780 aa8.15□□□□□ -1.1
CKS1B-204ENST00000471245 MCATQ8IVS2 390 aaKnown RBP8.15□□□□□ -1.1
CKS1B-204ENST00000471245 MRPL41Q8IXM3 137 aaKnown RBP8.15□□□□□ -1.1
CKS1B-204ENST00000471245 FAM178BQ8IXR5 827 aa8.15□□□□□ -1.1
CKS1B-204ENST00000471245 SLFN12Q8IYM2 578 aa8.15□□□□□ -1.1
CKS1B-204ENST00000471245 ST13P5Q8NFI4 369 aaPredicted RBP8.15□□□□□ -1.1
CKS1B-204ENST00000471245 ZNF507Q8TCN5 953 aa8.15□□□□□ -1.1
CKS1B-204ENST00000471245 MICAL1Q8TDZ2 1067 aa8.15□□□□□ -1.1
CKS1B-204ENST00000471245 ZNF669Q96BR6 464 aaPredicted RBP8.15□□□□□ -1.1
CKS1B-204ENST00000471245 FANCD2OSQ96PS1 177 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms