RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 GRIN2DO15399 1336 aa8.98□□□□□ -0.97
TPM3-215ENST00000469717 EBAG9O00559 213 aa8.98□□□□□ -0.97
TPM3-215ENST00000469717 RNF113AO15541 343 aaKnown RBP8.98□□□□□ -0.97
TPM3-215ENST00000469717 DDX58O95786 925 aaKnown RBP8.98□□□□□ -0.97
TPM3-215ENST00000469717 ATP1A2P50993 1020 aa8.98□□□□□ -0.97
TPM3-215ENST00000469717 EIF5P55010 431 aaKnown RBP8.98□□□□□ -0.97
TPM3-215ENST00000469717 GNGT1P63211 74 aa8.98□□□□□ -0.97
TPM3-215ENST00000469717 C2orf54Q08AI8 447 aa8.98□□□□□ -0.97
TPM3-215ENST00000469717 NEXNQ0ZGT2 675 aa8.98□□□□□ -0.97
TPM3-215ENST00000469717 PDCLQ13371 301 aa8.98□□□□□ -0.97
TPM3-215ENST00000469717 SWT1Q5T5J6 900 aaKnown RBP8.98□□□□□ -0.97
TPM3-215ENST00000469717 CCDC148Q8NFR7 591 aa8.98□□□□□ -0.97
TPM3-215ENST00000469717 CEP83Q9Y592 693 aa8.98□□□□□ -0.97
TPM3-215ENST00000469717 DUSP10Q9Y6W6 482 aa8.98□□□□□ -0.97
TPM3-215ENST00000469717 ADORA1P30542 326 aa8.98□□□□□ -0.97
TPM3-215ENST00000469717 AARSP49588 968 aaKnown RBP eCLIP8.98□□□□□ -0.97
TPM3-215ENST00000469717 METAP2P50579 478 aaKnown RBP eCLIP8.98□□□□□ -0.97
TPM3-215ENST00000469717 SETQ01105 290 aaPredicted RBP8.98□□□□□ -0.97
TPM3-215ENST00000469717 KCTD16Q68DU8 428 aa8.98□□□□□ -0.97
TPM3-215ENST00000469717 RALYLQ86SE5 291 aaKnown RBP8.98□□□□□ -0.97
TPM3-215ENST00000469717 KRI1Q8N9T8 703 aaKnown RBP8.98□□□□□ -0.97
TPM3-215ENST00000469717 FAM76AQ8TAV0 307 aa8.98□□□□□ -0.97
TPM3-215ENST00000469717 EPSTI1Q96J88 318 aa8.98□□□□□ -0.97
TPM3-215ENST00000469717 PSMB7Q99436 277 aa8.98□□□□□ -0.97
TPM3-215ENST00000469717 CARD10Q9BWT7 1032 aa8.98□□□□□ -0.97
TPM3-215ENST00000469717 TECPR2O15040 1411 aa8.98□□□□□ -0.97
TPM3-215ENST00000469717 NWD2Q9ULI1 1742 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 KDM3BQ7LBC6 1761 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 PBX1P40424 430 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 SLC7A5Q01650 507 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 WHAMMP3Q1A5X7 153 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 ATG9AQ7Z3C6 839 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 JMYQ8N9B5 988 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 ARL8AQ96BM9 186 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 NUP88Q99567 741 aaPredicted RBP8.97□□□□□ -0.97
TPM3-215ENST00000469717 CRACR2AQ9BSW2 395 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 TAB2Q9NYJ8 693 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 SARSP49591 514 aaKnown RBP8.97□□□□□ -0.97
TPM3-215ENST00000469717 TRDNQ13061 729 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 WDR93Q6P2C0 686 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 TBC1D10CQ8IV04 446 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 KIRREL3Q8IZU9 778 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 CEP89Q96ST8 783 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 SLC26A6Q9BXS9 759 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 GBP3Q9H0R5 595 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 EHD2Q9NZN4 543 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 RGPD2P0DJD1 1756 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 B4E1Z4 1266 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 INPP5BP32019 993 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 MATR3P43243 847 aaKnown RBP eCLIP8.97□□□□□ -0.97
TPM3-215ENST00000469717 PLCD1P51178 756 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 IMMTQ16891 758 aaKnown RBP8.97□□□□□ -0.97
TPM3-215ENST00000469717 MAP9Q49MG5 647 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 MLKLQ8NB16 471 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 OXER1Q8TDS5 423 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 UBN2Q6ZU65 1347 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 SYNRGQ9UMZ2 1314 aa8.97□□□□□ -0.97
TPM3-215ENST00000469717 TOPAZ1Q8N9V7 1692 aa8.96□□□□□ -0.97
TPM3-215ENST00000469717 RCCD1A6NED2 376 aa8.96□□□□□ -0.97
TPM3-215ENST00000469717 ACTN4O43707 911 aaKnown RBP8.96□□□□□ -0.97
TPM3-215ENST00000469717 AKAP4Q5JQC9 854 aa8.96□□□□□ -0.97
TPM3-215ENST00000469717 CSRNP2Q9H175 543 aa8.96□□□□□ -0.97
TPM3-215ENST00000469717 BLZF1Q9H2G9 400 aa8.96□□□□□ -0.97
TPM3-215ENST00000469717 ACBD3Q9H3P7 528 aa8.96□□□□□ -0.97
TPM3-215ENST00000469717 ABHD10Q9NUJ1 306 aa8.96□□□□□ -0.97
TPM3-215ENST00000469717 FBXO2Q9UK22 296 aaPredicted RBP8.96□□□□□ -0.97
TPM3-215ENST00000469717 MRC1P22897 1456 aa8.96□□□□□ -0.97
TPM3-215ENST00000469717 ANKARQ7Z5J8 1434 aa8.96□□□□□ -0.97
TPM3-215ENST00000469717 PTPRUQ92729 1446 aa8.96□□□□□ -0.97
TPM3-215ENST00000469717 ZEB2O60315 1214 aa8.96□□□□□ -0.97
TPM3-215ENST00000469717 KRT9P35527 623 aa8.96□□□□□ -0.97
TPM3-215ENST00000469717 ATP6V1AP38606 617 aa8.96□□□□□ -0.97
TPM3-215ENST00000469717 ACTN3Q08043 901 aaPredicted RBP8.96□□□□□ -0.97
TPM3-215ENST00000469717 SND1Q7KZF4 910 aaKnown RBP eCLIP8.96□□□□□ -0.97
TPM3-215ENST00000469717 SMCR8Q8TEV9 937 aaPredicted RBP8.96□□□□□ -0.97
TPM3-215ENST00000469717 METTL22Q9BUU2 404 aaPredicted RBP8.96□□□□□ -0.97
TPM3-215ENST00000469717 CAPS2Q9BXY5 557 aa8.96□□□□□ -0.97
TPM3-215ENST00000469717 GNL3LQ9NVN8 582 aaKnown RBP8.96□□□□□ -0.97
TPM3-215ENST00000469717 CTNND2Q9UQB3 1225 aa8.96□□□□□ -0.97
TPM3-215ENST00000469717 ZMYM6O95789 1325 aa8.96□□□□□ -0.98
TPM3-215ENST00000469717 FAM237AA0A1B0GTK4 181 aa8.96□□□□□ -0.98
TPM3-215ENST00000469717 KDM4FA0A1W2PPD8 638 aa8.96□□□□□ -0.98
TPM3-215ENST00000469717 hCG_1642624A0A1W2PR95 340 aa8.96□□□□□ -0.98
TPM3-215ENST00000469717 GOLGA6BA6NDN3 693 aa8.96□□□□□ -0.98
TPM3-215ENST00000469717 WNT7AO00755 349 aa8.96□□□□□ -0.98
TPM3-215ENST00000469717 SHOX2O60902 331 aaPredicted RBP8.96□□□□□ -0.98
TPM3-215ENST00000469717 APOA5Q6Q788 366 aa8.96□□□□□ -0.98
TPM3-215ENST00000469717 TRAPPC11Q7Z392 1133 aa8.96□□□□□ -0.98
TPM3-215ENST00000469717 MSL3Q8N5Y2 521 aaKnown RBP8.96□□□□□ -0.98
TPM3-215ENST00000469717 NCOA7Q8NI08 942 aa8.96□□□□□ -0.98
TPM3-215ENST00000469717 DMGDHQ9UI17 866 aaKnown RBP8.96□□□□□ -0.98
TPM3-215ENST00000469717 BAZ2BQ9UIF8 2168 aaKnown RBP8.96□□□□□ -0.98
TPM3-215ENST00000469717 H0YHG0 523 aa8.96□□□□□ -0.98
TPM3-215ENST00000469717 PES1O00541 588 aaKnown RBP8.96□□□□□ -0.98
TPM3-215ENST00000469717 N4BP3O15049 544 aa8.96□□□□□ -0.98
TPM3-215ENST00000469717 APBA1Q02410 837 aa8.96□□□□□ -0.98
TPM3-215ENST00000469717 KRT31Q15323 416 aa8.96□□□□□ -0.98
TPM3-215ENST00000469717 ANKRD13DQ6ZTN6 518 aa8.96□□□□□ -0.98
TPM3-215ENST00000469717 TSEN2Q8NCE0 465 aaKnown RBP8.96□□□□□ -0.98
TPM3-215ENST00000469717 AIDAQ96BJ3 306 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms