RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 MMS22LQ6ZRQ5 1243 aa14.02□□□□□ -0.17
USP11-206ENST00000469080 CTCFLQ8NI51 663 aaPredicted RBP14.02□□□□□ -0.17
USP11-206ENST00000469080 MXD3Q9BW11 206 aa14.02□□□□□ -0.17
USP11-206ENST00000469080 QTRT2Q9H974 415 aaKnown RBP14.02□□□□□ -0.17
USP11-206ENST00000469080 PLEKHA8P1O95397 391 aa14.01□□□□□ -0.17
USP11-206ENST00000469080 IBSPP21815 317 aaPredicted RBP14.01□□□□□ -0.17
USP11-206ENST00000469080 RASGRP2Q7LDG7 609 aa14.01□□□□□ -0.17
USP11-206ENST00000469080 TMC6Q7Z403 805 aa14.01□□□□□ -0.17
USP11-206ENST00000469080 AMOTL1Q8IY63 956 aa14.01□□□□□ -0.17
USP11-206ENST00000469080 ZNF654Q8IZM8 581 aa14.01□□□□□ -0.17
USP11-206ENST00000469080 ZNF444Q8N0Y2 327 aaPredicted RBP14.01□□□□□ -0.17
USP11-206ENST00000469080 FAM84BQ96KN1 310 aaPredicted RBP14.01□□□□□ -0.17
USP11-206ENST00000469080 MCM7P33993 719 aa14.01□□□□□ -0.17
USP11-206ENST00000469080 MECOMQ03112 1051 aa14.01□□□□□ -0.17
USP11-206ENST00000469080 ZNF274Q96GC6 653 aaPredicted RBP14.01□□□□□ -0.17
USP11-206ENST00000469080 CLSTN2Q9H4D0 955 aa14.01□□□□□ -0.17
USP11-206ENST00000469080 ARGLU1Q9NWB6 273 aaPredicted RBP14.01□□□□□ -0.17
USP11-206ENST00000469080 FOXN1O15353 648 aa14□□□□□ -0.17
USP11-206ENST00000469080 FOXP2O15409 715 aa14□□□□□ -0.17
USP11-206ENST00000469080 ZNF202O95125 648 aa14□□□□□ -0.17
USP11-206ENST00000469080 LDHBP07195 334 aaKnown RBP14□□□□□ -0.17
USP11-206ENST00000469080 CACNB3P54284 484 aa14□□□□□ -0.17
USP11-206ENST00000469080 GSCP56915 257 aaPredicted RBP14□□□□□ -0.17
USP11-206ENST00000469080 ARHGAP29Q52LW3 1261 aa14□□□□□ -0.17
USP11-206ENST00000469080 BCL9O00512 1426 aa14□□□□□ -0.17
USP11-206ENST00000469080 FAM170AA1A519 330 aa14□□□□□ -0.17
USP11-206ENST00000469080 POLR2DO15514 142 aaKnown RBP14□□□□□ -0.17
USP11-206ENST00000469080 TPM1P09493 284 aa14□□□□□ -0.17
USP11-206ENST00000469080 GTF2IP78347 998 aa14□□□□□ -0.17
USP11-206ENST00000469080 UBE3CQ15386 1083 aa14□□□□□ -0.17
USP11-206ENST00000469080 NBPF9Q3BBW0 867 aa14□□□□□ -0.17
USP11-206ENST00000469080 NAIF1Q69YI7 327 aaPredicted RBP14□□□□□ -0.17
USP11-206ENST00000469080 CLEC10AQ8IUN9 316 aa14□□□□□ -0.17
USP11-206ENST00000469080 SCAF8Q9UPN6 1271 aaKnown RBP14□□□□□ -0.17
USP11-206ENST00000469080 USP17L3A6NCW0 530 aa14□□□□□ -0.17
USP11-206ENST00000469080 USP17L4A6NCW7 530 aa14□□□□□ -0.17
USP11-206ENST00000469080 TFAP4Q01664 338 aa14□□□□□ -0.17
USP11-206ENST00000469080 DPCR1Q3MIW9 517 aa14□□□□□ -0.17
USP11-206ENST00000469080 USP17L1Q7RTZ2 530 aa14□□□□□ -0.17
USP11-206ENST00000469080 HEATR3Q7Z4Q2 680 aa14□□□□□ -0.17
USP11-206ENST00000469080 CRNKL1Q9BZJ0 848 aaKnown RBP14□□□□□ -0.17
USP11-206ENST00000469080 KRT23Q9C075 422 aa14□□□□□ -0.17
USP11-206ENST00000469080 ALS2Q96Q42 1657 aa14□□□□□ -0.17
USP11-206ENST00000469080 VWA3AA6NCI4 1184 aa13.99□□□□□ -0.17
USP11-206ENST00000469080 FAM196BA6NMK8 535 aa13.99□□□□□ -0.17
USP11-206ENST00000469080 IFNKQ9P0W0 207 aa13.99□□□□□ -0.17
USP11-206ENST00000469080 HPS5Q9UPZ3 1129 aa13.99□□□□□ -0.17
USP11-206ENST00000469080 LTBP4Q8N2S1 1624 aa13.99□□□□□ -0.17
USP11-206ENST00000469080 CCDC196A0A1B0GTZ2 297 aa13.99□□□□□ -0.17
USP11-206ENST00000469080 SEC31AO94979 1220 aaKnown RBP13.99□□□□□ -0.17
USP11-206ENST00000469080 PFKFB1P16118 471 aa13.99□□□□□ -0.17
USP11-206ENST00000469080 GRIN1Q05586 938 aa13.99□□□□□ -0.17
USP11-206ENST00000469080 PLEKHG2Q9H7P9 1386 aa13.99□□□□□ -0.17
USP11-206ENST00000469080 ZNF804BA4D1E1 1349 aa13.99□□□□□ -0.17
USP11-206ENST00000469080 ROBO1Q9Y6N7 1651 aa13.99□□□□□ -0.17
USP11-206ENST00000469080 SH2B2O14492 632 aaPredicted RBP13.99□□□□□ -0.17
USP11-206ENST00000469080 ECM2O94769 699 aaPredicted RBP13.99□□□□□ -0.17
USP11-206ENST00000469080 TSPY3P0CV98 308 aa13.99□□□□□ -0.17
USP11-206ENST00000469080 TSPY8P0CW00 308 aa13.99□□□□□ -0.17
USP11-206ENST00000469080 PIK3AP1Q6ZUJ8 805 aa13.99□□□□□ -0.17
USP11-206ENST00000469080 AFF2P51816 1311 aa13.98□□□□□ -0.17
USP11-206ENST00000469080 RNF41Q9H4P4 317 aaPredicted RBP13.98□□□□□ -0.17
USP11-206ENST00000469080 SPATA31A5Q5VU36 1347 aa13.98□□□□□ -0.17
USP11-206ENST00000469080 SPATA31A7Q8IWB4 1347 aa13.98□□□□□ -0.17
USP11-206ENST00000469080 EPB41L2O43491 1005 aaKnown RBP13.98□□□□□ -0.17
USP11-206ENST00000469080 XBP1P17861 261 aa13.98□□□□□ -0.17
USP11-206ENST00000469080 ACTN2P35609 894 aa13.98□□□□□ -0.17
USP11-206ENST00000469080 FAM160A1Q05DH4 1040 aa13.98□□□□□ -0.17
USP11-206ENST00000469080 NBPF11Q86T75 865 aa13.98□□□□□ -0.17
USP11-206ENST00000469080 SMYD4Q8IYR2 804 aaPredicted RBP13.98□□□□□ -0.17
USP11-206ENST00000469080 NBPF3Q9H094 633 aa13.98□□□□□ -0.17
USP11-206ENST00000469080 ANO10Q9NW15 660 aa13.98□□□□□ -0.17
USP11-206ENST00000469080 KIF23Q02241 960 aaPredicted RBP13.98□□□□□ -0.17
USP11-206ENST00000469080 STX1AQ16623 288 aa13.98□□□□□ -0.17
USP11-206ENST00000469080 FANCBQ8NB91 859 aa13.98□□□□□ -0.17
USP11-206ENST00000469080 KAT14Q9H8E8 782 aa13.98□□□□□ -0.17
USP11-206ENST00000469080 IVLP07476 585 aa13.97□□□□□ -0.17
USP11-206ENST00000469080 GRIK5Q16478 980 aa13.97□□□□□ -0.17
USP11-206ENST00000469080 USP49Q70CQ1 688 aa13.97□□□□□ -0.17
USP11-206ENST00000469080 CDCA7Q9BWT1 371 aaPredicted RBP13.97□□□□□ -0.17
USP11-206ENST00000469080 UBA5Q9GZZ9 404 aa13.97□□□□□ -0.17
USP11-206ENST00000469080 IRAK4Q9NWZ3 460 aa13.97□□□□□ -0.17
USP11-206ENST00000469080 PCDHB6Q9Y5E3 794 aa13.97□□□□□ -0.17
USP11-206ENST00000469080 C5P01031 1676 aa13.97□□□□□ -0.17
USP11-206ENST00000469080 TTC36A6NLP5 189 aa13.97□□□□□ -0.17
USP11-206ENST00000469080 SSBP05455 408 aaKnown RBP eCLIP13.97□□□□□ -0.17
USP11-206ENST00000469080 MAP9Q49MG5 647 aa13.97□□□□□ -0.17
USP11-206ENST00000469080 LLPHQ9BRT6 129 aaKnown RBP13.97□□□□□ -0.17
USP11-206ENST00000469080 LY9Q9HBG7 655 aa13.97□□□□□ -0.17
USP11-206ENST00000469080 AFDNP55196 1824 aaKnown RBP13.97□□□□□ -0.17
USP11-206ENST00000469080 WDHD1O75717 1129 aaPredicted RBP13.96□□□□□ -0.17
USP11-206ENST00000469080 MFSD14BQ5SR56 506 aa13.96□□□□□ -0.17
USP11-206ENST00000469080 FOXR1Q6PIV2 292 aa13.96□□□□□ -0.17
USP11-206ENST00000469080 JMYQ8N9B5 988 aa13.96□□□□□ -0.17
USP11-206ENST00000469080 PSMD1Q99460 953 aa13.96□□□□□ -0.17
USP11-206ENST00000469080 BLZF1Q9H2G9 400 aa13.96□□□□□ -0.17
USP11-206ENST00000469080 CDHR2Q9BYE9 1310 aa13.96□□□□□ -0.17
USP11-206ENST00000469080 VEGFAP15692 232 aaPredicted RBP13.96□□□□□ -0.17
USP11-206ENST00000469080 SMC1AQ14683 1233 aaKnown RBP13.96□□□□□ -0.17
USP11-206ENST00000469080 SWT1Q5T5J6 900 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms