RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 PABPC4Q13310 644 aaKnown RBP eCLIP5.03□□□□□ -1.6
HMGB1P25-201ENST00000468402 LONRF2Q1L5Z9 754 aa5.03□□□□□ -1.6
HMGB1P25-201ENST00000468402 ELOA3BQ3SY89 546 aa5.03□□□□□ -1.6
HMGB1P25-201ENST00000468402 HP1BP3Q5SSJ5 553 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P25-201ENST00000468402 CDCP2Q5VXM1 449 aa5.03□□□□□ -1.6
HMGB1P25-201ENST00000468402 ADAT2Q7Z6V5 191 aaKnown RBP5.03□□□□□ -1.6
HMGB1P25-201ENST00000468402 CERS3Q8IU89 383 aa5.03□□□□□ -1.6
HMGB1P25-201ENST00000468402 WFDC8Q8IUA0 241 aa5.03□□□□□ -1.6
HMGB1P25-201ENST00000468402 ELOA3Q8NG57 546 aa5.03□□□□□ -1.6
HMGB1P25-201ENST00000468402 TTC9Q92623 222 aa5.03□□□□□ -1.6
HMGB1P25-201ENST00000468402 WDR89Q96FK6 387 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P25-201ENST00000468402 OSGEPQ9NPF4 335 aa5.03□□□□□ -1.6
HMGB1P25-201ENST00000468402 LRRC4BQ9NT99 713 aa5.03□□□□□ -1.6
HMGB1P25-201ENST00000468402 FAN1Q9Y2M0 1017 aa5.03□□□□□ -1.6
HMGB1P25-201ENST00000468402 CCDC180Q9P1Z9 1646 aa5.03□□□□□ -1.6
HMGB1P25-201ENST00000468402 TRAV20A0A0B4J274 112 aa5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 TNFRSF10CO14798 259 aa5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 ADCY3O60266 1144 aa5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 PDE8AO60658 829 aa5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 DNAJA2O60884 412 aa5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 SELPP16109 830 aa5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 GATA4P43694 442 aa5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 CDKN1CP49918 316 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 HSP90AA2PQ14568 343 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 TM4SF20Q53R12 229 aa5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 FAM209AQ5JX71 171 aa5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 TDRD10Q5VZ19 366 aaKnown RBP5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 HEATR6Q6AI08 1181 aaKnown RBP5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 CDC37L1Q7L3B6 337 aa5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 CYFIP1Q7L576 1253 aa5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 DDX42Q86XP3 938 aaKnown RBP eCLIP5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 LRRN4CLQ8ND94 238 aa5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 WNT8BQ93098 351 aa5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 KLHDC7BQ96G42 594 aa5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 SGSM3Q96HU1 749 aa5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 DHRS4Q9BTZ2 278 aa5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 KLF15Q9UIH9 416 aa5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 GGA1Q9UJY5 639 aa5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 ADAM30Q9UKF2 790 aa5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 ZNF214Q9UL59 606 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 SUGT1Q9Y2Z0 365 aa5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 TACC3Q9Y6A5 838 aa5.02□□□□□ -1.61
HMGB1P25-201ENST00000468402 TRBV23-1A0A0A0MS06 115 aa5.01□□□□□ -1.61
HMGB1P25-201ENST00000468402 ANKRD34BA5PLL1 514 aa5.01□□□□□ -1.61
HMGB1P25-201ENST00000468402 BTBD11A6QL63 1104 aa5.01□□□□□ -1.61
HMGB1P25-201ENST00000468402 LILRB5O75023 590 aa5.01□□□□□ -1.61
HMGB1P25-201ENST00000468402 MAP4K4O95819 1239 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P25-201ENST00000468402 CPEP16870 476 aa5.01□□□□□ -1.61
HMGB1P25-201ENST00000468402 COL8A1P27658 744 aa5.01□□□□□ -1.61
HMGB1P25-201ENST00000468402 STAT3P40763 770 aa5.01□□□□□ -1.61
HMGB1P25-201ENST00000468402 CCNFP41002 786 aa5.01□□□□□ -1.61
HMGB1P25-201ENST00000468402 AKAP4Q5JQC9 854 aa5.01□□□□□ -1.61
HMGB1P25-201ENST00000468402 PPM1JQ5JR12 505 aa5.01□□□□□ -1.61
HMGB1P25-201ENST00000468402 TMEM201Q5SNT2 666 aa5.01□□□□□ -1.61
HMGB1P25-201ENST00000468402 FOXB2Q5VYV0 432 aa5.01□□□□□ -1.61
HMGB1P25-201ENST00000468402 FCHSD1Q86WN1 690 aa5.01□□□□□ -1.61
HMGB1P25-201ENST00000468402 WDR75Q8IWA0 830 aaKnown RBP5.01□□□□□ -1.61
HMGB1P25-201ENST00000468402 KLHL6Q8WZ60 621 aa5.01□□□□□ -1.61
HMGB1P25-201ENST00000468402 ACSF2Q96CM8 615 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P25-201ENST00000468402 SLC6A18Q96N87 628 aa5.01□□□□□ -1.61
HMGB1P25-201ENST00000468402 KIF2CQ99661 725 aa5.01□□□□□ -1.61
HMGB1P25-201ENST00000468402 RUSC1Q9BVN2 902 aa5.01□□□□□ -1.61
HMGB1P25-201ENST00000468402 WNT10AQ9GZT5 417 aa5.01□□□□□ -1.61
HMGB1P25-201ENST00000468402 SSU72Q9NP77 194 aaKnown RBP5.01□□□□□ -1.61
HMGB1P25-201ENST00000468402 CACNA2D2Q9NY47 1150 aa5.01□□□□□ -1.61
HMGB1P25-201ENST00000468402 GABBR1Q9UBS5 961 aa5.01□□□□□ -1.61
HMGB1P25-201ENST00000468402 HIF3AQ9Y2N7 669 aa5.01□□□□□ -1.61
HMGB1P25-201ENST00000468402 A0A1W2PQU0 124 aa5□□□□□ -1.61
HMGB1P25-201ENST00000468402 SPDYE3A6NKU9 549 aa5□□□□□ -1.61
HMGB1P25-201ENST00000468402 ALG1L2C9J202 215 aa5□□□□□ -1.61
HMGB1P25-201ENST00000468402 NOP56O00567 594 aaKnown RBP5□□□□□ -1.61
HMGB1P25-201ENST00000468402 PLD2O14939 933 aa5□□□□□ -1.61
HMGB1P25-201ENST00000468402 PEX14O75381 377 aa5□□□□□ -1.61
HMGB1P25-201ENST00000468402 CLEC3AO75596 197 aa5□□□□□ -1.61
HMGB1P25-201ENST00000468402 APBA3O96018 575 aa5□□□□□ -1.61
HMGB1P25-201ENST00000468402 CTSBP07858 339 aa5□□□□□ -1.61
HMGB1P25-201ENST00000468402 EXOSC10Q01780 885 aaKnown RBP5□□□□□ -1.61
HMGB1P25-201ENST00000468402 KIF4BQ2VIQ3 1234 aa5□□□□□ -1.61
HMGB1P25-201ENST00000468402 BRDTQ58F21 947 aaPredicted RBP5□□□□□ -1.61
HMGB1P25-201ENST00000468402 ZC3H12AQ5D1E8 599 aaKnown RBP5□□□□□ -1.61
HMGB1P25-201ENST00000468402 DDX46Q7L014 1031 aaKnown RBP5□□□□□ -1.61
HMGB1P25-201ENST00000468402 CD163Q86VB7 1156 aa5□□□□□ -1.61
HMGB1P25-201ENST00000468402 THNSL2Q86YJ6 484 aa5□□□□□ -1.61
HMGB1P25-201ENST00000468402 HID1Q8IV36 788 aa5□□□□□ -1.61
HMGB1P25-201ENST00000468402 SCUBE1Q8IWY4 988 aa5□□□□□ -1.61
HMGB1P25-201ENST00000468402 CCDC144CPQ8IYA2 1237 aa5□□□□□ -1.61
HMGB1P25-201ENST00000468402 KLHL23Q8NBE8 558 aa5□□□□□ -1.61
HMGB1P25-201ENST00000468402 LEO1Q8WVC0 666 aaPredicted RBP5□□□□□ -1.61
HMGB1P25-201ENST00000468402 TMEM87BQ96K49 555 aa5□□□□□ -1.61
HMGB1P25-201ENST00000468402 FGD4Q96M96 766 aa5□□□□□ -1.61
HMGB1P25-201ENST00000468402 AARSD1Q9BTE6 412 aaKnown RBP5□□□□□ -1.61
HMGB1P25-201ENST00000468402 FAM126AQ9BYI3 521 aaPredicted RBP5□□□□□ -1.61
HMGB1P25-201ENST00000468402 NCOA5Q9HCD5 579 aaKnown RBP5□□□□□ -1.61
HMGB1P25-201ENST00000468402 ZFP64Q9NPA5 681 aa5□□□□□ -1.61
HMGB1P25-201ENST00000468402 SLC52A1Q9NWF4 448 aa5□□□□□ -1.61
HMGB1P25-201ENST00000468402 MRPS23Q9Y3D9 190 aaKnown RBP5□□□□□ -1.61
HMGB1P25-201ENST00000468402 EID1Q9Y6B2 187 aa5□□□□□ -1.61
HMGB1P25-201ENST00000468402 A0A087X0B3 334 aa4.99□□□□□ -1.61
HMGB1P25-201ENST00000468402 DDX3YO15523 660 aaKnown RBP4.99□□□□□ -1.61
HMGB1P25-201ENST00000468402 PRODHO43272 600 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms