RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 USP17L18D6R9N7 530 aa11.43□□□□□ -0.58
ABCF3-205ENST00000466416 USP17L22D6RA61 530 aa11.43□□□□□ -0.58
ABCF3-205ENST00000466416 USP17L17D6RBQ6 530 aa11.43□□□□□ -0.58
ABCF3-205ENST00000466416 USP17L19D6RCP7 530 aa11.43□□□□□ -0.58
ABCF3-205ENST00000466416 USP17L20D6RJB6 530 aa11.43□□□□□ -0.58
ABCF3-205ENST00000466416 CNMDO75829 334 aa11.43□□□□□ -0.58
ABCF3-205ENST00000466416 ITGB8P26012 769 aa11.43□□□□□ -0.58
ABCF3-205ENST00000466416 USP17L24Q0WX57 530 aa11.43□□□□□ -0.58
ABCF3-205ENST00000466416 FOXP4Q8IVH2 680 aaPredicted RBP11.43□□□□□ -0.58
ABCF3-205ENST00000466416 FERMT2Q96AC1 680 aa11.43□□□□□ -0.58
ABCF3-205ENST00000466416 EMILIN3Q9NT22 766 aa11.43□□□□□ -0.58
ABCF3-205ENST00000466416 NDUFB9Q9Y6M9 179 aa11.43□□□□□ -0.58
ABCF3-205ENST00000466416 MYO9BQ13459 2157 aa11.43□□□□□ -0.58
ABCF3-205ENST00000466416 FRMPD3Q5JV73 1810 aa11.42□□□□□ -0.58
ABCF3-205ENST00000466416 STRNO43815 780 aa11.42□□□□□ -0.58
ABCF3-205ENST00000466416 MYCNP04198 464 aaPredicted RBP11.42□□□□□ -0.58
ABCF3-205ENST00000466416 RASGRF1Q13972 1273 aa11.42□□□□□ -0.58
ABCF3-205ENST00000466416 LRRC41Q15345 812 aa11.42□□□□□ -0.58
ABCF3-205ENST00000466416 LBX2Q6XYB7 198 aa11.42□□□□□ -0.58
ABCF3-205ENST00000466416 DPP9Q86TI2 863 aa11.42□□□□□ -0.58
ABCF3-205ENST00000466416 METTL16Q86W50 562 aaKnown RBP11.42□□□□□ -0.58
ABCF3-205ENST00000466416 LRFN3Q9BTN0 628 aa11.42□□□□□ -0.58
ABCF3-205ENST00000466416 USP44Q9H0E7 712 aa11.42□□□□□ -0.58
ABCF3-205ENST00000466416 PRDM12Q9H4Q4 367 aa11.42□□□□□ -0.58
ABCF3-205ENST00000466416 PHF24Q9UPV7 400 aa11.42□□□□□ -0.58
ABCF3-205ENST00000466416 BMP1P13497 986 aa11.41□□□□□ -0.58
ABCF3-205ENST00000466416 IL15P40933 162 aaPredicted RBP11.41□□□□□ -0.58
ABCF3-205ENST00000466416 JAG1P78504 1218 aa11.41□□□□□ -0.58
ABCF3-205ENST00000466416 AAK1Q2M2I8 961 aa11.41□□□□□ -0.58
ABCF3-205ENST00000466416 ANO1Q5XXA6 986 aa11.41□□□□□ -0.58
ABCF3-205ENST00000466416 CCDC174Q6PII3 467 aa11.41□□□□□ -0.58
ABCF3-205ENST00000466416 TEX11Q8IYF3 940 aa11.41□□□□□ -0.58
ABCF3-205ENST00000466416 C12orf42Q96LP6 360 aa11.41□□□□□ -0.58
ABCF3-205ENST00000466416 TOX2Q96NM4 488 aa11.41□□□□□ -0.58
ABCF3-205ENST00000466416 TRIM34Q9BYJ4 488 aa11.41□□□□□ -0.58
ABCF3-205ENST00000466416 TMEM39AQ9NV64 488 aa11.41□□□□□ -0.58
ABCF3-205ENST00000466416 SLC5A4Q9NY91 659 aa11.41□□□□□ -0.58
ABCF3-205ENST00000466416 CXXC1Q9P0U4 656 aaPredicted RBP11.41□□□□□ -0.58
ABCF3-205ENST00000466416 ADGRE1Q14246 886 aa11.4□□□□□ -0.58
ABCF3-205ENST00000466416 CCDC85BQ15834 202 aaPredicted RBP11.4□□□□□ -0.58
ABCF3-205ENST00000466416 CATSPERGQ6ZRH7 1159 aa11.4□□□□□ -0.58
ABCF3-205ENST00000466416 CCDC129Q6ZRS4 1044 aa11.4□□□□□ -0.58
ABCF3-205ENST00000466416 ZNF384Q8TF68 577 aa11.4□□□□□ -0.58
ABCF3-205ENST00000466416 NSUN4Q96CB9 384 aaKnown RBP11.4□□□□□ -0.58
ABCF3-205ENST00000466416 PBX4Q9BYU1 374 aa11.4□□□□□ -0.58
ABCF3-205ENST00000466416 SIL1Q9H173 461 aa11.4□□□□□ -0.58
ABCF3-205ENST00000466416 ZBTB21Q9ULJ3 1066 aa11.4□□□□□ -0.58
ABCF3-205ENST00000466416 DCDC2CA8MYV0 355 aa11.39□□□□□ -0.59
ABCF3-205ENST00000466416 IGFBP4P22692 258 aa11.39□□□□□ -0.59
ABCF3-205ENST00000466416 ADORA1P30542 326 aa11.39□□□□□ -0.59
ABCF3-205ENST00000466416 USP14P54578 494 aa11.39□□□□□ -0.59
ABCF3-205ENST00000466416 TMEM31Q5JXX7 168 aa11.39□□□□□ -0.59
ABCF3-205ENST00000466416 RNF180Q86T96 592 aa11.39□□□□□ -0.59
ABCF3-205ENST00000466416 CRACR2BQ8N4Y2 399 aaPredicted RBP11.39□□□□□ -0.59
ABCF3-205ENST00000466416 SLC44A5Q8NCS7 719 aa11.39□□□□□ -0.59
ABCF3-205ENST00000466416 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.39□□□□□ -0.59
ABCF3-205ENST00000466416 NOL10Q9BSC4 688 aaKnown RBP11.39□□□□□ -0.59
ABCF3-205ENST00000466416 BTBD7Q9P203 1132 aa11.39□□□□□ -0.59
ABCF3-205ENST00000466416 MSRAQ9UJ68 235 aa11.39□□□□□ -0.59
ABCF3-205ENST00000466416 ATAD5Q96QE3 1844 aa11.39□□□□□ -0.59
ABCF3-205ENST00000466416 PQBP1O60828 265 aaKnown RBP11.38□□□□□ -0.59
ABCF3-205ENST00000466416 GDF11O95390 407 aa11.38□□□□□ -0.59
ABCF3-205ENST00000466416 TIMP1P01033 207 aa11.38□□□□□ -0.59
ABCF3-205ENST00000466416 PLCG2P16885 1265 aa11.38□□□□□ -0.59
ABCF3-205ENST00000466416 ADORA2AP29274 412 aa11.38□□□□□ -0.59
ABCF3-205ENST00000466416 PBX2P40425 430 aa11.38□□□□□ -0.59
ABCF3-205ENST00000466416 FAAP100Q0VG06 881 aa11.38□□□□□ -0.59
ABCF3-205ENST00000466416 PPIGQ13427 754 aaKnown RBP eCLIP11.38□□□□□ -0.593e-6■□□□□ 9.2
ABCF3-205ENST00000466416 MVPQ14764 893 aaKnown RBP11.38□□□□□ -0.59
ABCF3-205ENST00000466416 RAB30Q15771 203 aa11.38□□□□□ -0.59
ABCF3-205ENST00000466416 FAM47AQ5JRC9 791 aa11.38□□□□□ -0.59
ABCF3-205ENST00000466416 RASIP1Q5U651 963 aa11.38□□□□□ -0.59
ABCF3-205ENST00000466416 MFSD5Q6N075 450 aa11.38□□□□□ -0.59
ABCF3-205ENST00000466416 ANKRD33Q7Z3H0 272 aa11.38□□□□□ -0.59
ABCF3-205ENST00000466416 NECAB3Q96P71 396 aaPredicted RBP11.38□□□□□ -0.59
ABCF3-205ENST00000466416 DNAJC18Q9H819 358 aa11.38□□□□□ -0.59
ABCF3-205ENST00000466416 NRBP1Q9UHY1 535 aa11.38□□□□□ -0.59
ABCF3-205ENST00000466416 GPR37L1O60883 481 aa11.37□□□□□ -0.59
ABCF3-205ENST00000466416 BAG3O95817 575 aa11.37□□□□□ -0.59
ABCF3-205ENST00000466416 RARBP10826 455 aa11.37□□□□□ -0.59
ABCF3-205ENST00000466416 TIMM10P62072 90 aa11.37□□□□□ -0.59
ABCF3-205ENST00000466416 TMEM240Q5SV17 173 aa11.37□□□□□ -0.59
ABCF3-205ENST00000466416 PRAMEF19Q5SWL8 479 aa11.37□□□□□ -0.59
ABCF3-205ENST00000466416 ATF7IPQ6VMQ6 1270 aa11.37□□□□□ -0.59
ABCF3-205ENST00000466416 SHCBP1Q8NEM2 672 aa11.37□□□□□ -0.59
ABCF3-205ENST00000466416 SH3RF3Q8TEJ3 882 aaPredicted RBP11.37□□□□□ -0.59
ABCF3-205ENST00000466416 FEZ1Q99689 392 aa11.37□□□□□ -0.59
ABCF3-205ENST00000466416 KIAA1683Q9H0B3 1180 aa11.37□□□□□ -0.59
ABCF3-205ENST00000466416 EPHX3Q9H6B9 360 aa11.37□□□□□ -0.59
ABCF3-205ENST00000466416 XPNPEP3Q9NQH7 507 aa11.37□□□□□ -0.59
ABCF3-205ENST00000466416 RAI14Q9P0K7 980 aa11.37□□□□□ -0.59
ABCF3-205ENST00000466416 AKAP2Q9Y2D5 859 aa11.37□□□□□ -0.59
ABCF3-205ENST00000466416 PTPRCP08575 1304 aa11.36□□□□□ -0.59
ABCF3-205ENST00000466416 A0A1W2PQ45 241 aaPredicted RBP11.36□□□□□ -0.59
ABCF3-205ENST00000466416 A0A1W2PQY0 241 aa11.36□□□□□ -0.59
ABCF3-205ENST00000466416 SPDYE16A6NNV3 312 aaPredicted RBP11.36□□□□□ -0.59
ABCF3-205ENST00000466416 GRXCR1A8MXD5 290 aa11.36□□□□□ -0.59
ABCF3-205ENST00000466416 COBLO75128 1261 aa11.36□□□□□ -0.59
ABCF3-205ENST00000466416 VCAM1P19320 739 aa11.36□□□□□ -0.59
ABCF3-205ENST00000466416 PPP4CP60510 307 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms