RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 STX6O43752 255 aa18.02■□□□□ 0.48
GYPC-205ENST00000464053 RCAN1P53805 252 aa18.02■□□□□ 0.48
GYPC-205ENST00000464053 RTN1Q16799 776 aa18.02■□□□□ 0.48
GYPC-205ENST00000464053 LARP1BQ659C4 914 aaKnown RBP18.02■□□□□ 0.48
GYPC-205ENST00000464053 CLEC10AQ8IUN9 316 aa18.02■□□□□ 0.48
GYPC-205ENST00000464053 CHMP4CQ96CF2 233 aa18.02■□□□□ 0.48
GYPC-205ENST00000464053 TMEM47Q9BQJ4 181 aa18.02■□□□□ 0.48
GYPC-205ENST00000464053 TRIM34Q9BYJ4 488 aa18.02■□□□□ 0.48
GYPC-205ENST00000464053 KAT14Q9H8E8 782 aa18.02■□□□□ 0.48
GYPC-205ENST00000464053 NOVP48745 357 aa18.02■□□□□ 0.47
GYPC-205ENST00000464053 HIRAP54198 1017 aaPredicted RBP18.02■□□□□ 0.47
GYPC-205ENST00000464053 HMGN5P82970 282 aaKnown RBP18.02■□□□□ 0.47
GYPC-205ENST00000464053 RASA3Q14644 834 aa18.02■□□□□ 0.47
GYPC-205ENST00000464053 RRP1BQ14684 758 aaKnown RBP18.02■□□□□ 0.47
GYPC-205ENST00000464053 CERKLQ49MI3 558 aaPredicted RBP18.02■□□□□ 0.47
GYPC-205ENST00000464053 CMTR1Q8N1G2 835 aaKnown RBP18.02■□□□□ 0.47
GYPC-205ENST00000464053 PNMA1Q8ND90 353 aa18.02■□□□□ 0.47
GYPC-205ENST00000464053 PHKBQ93100 1093 aa18.02■□□□□ 0.47
GYPC-205ENST00000464053 MPHOSPH10O00566 681 aaKnown RBP18.01■□□□□ 0.47
GYPC-205ENST00000464053 DDAH1O94760 285 aa18.01■□□□□ 0.47
GYPC-205ENST00000464053 MTMR4Q9NYA4 1195 aa18.01■□□□□ 0.47
GYPC-205ENST00000464053 MTMR6Q9Y217 621 aa18.01■□□□□ 0.47
GYPC-205ENST00000464053 JAG1P78504 1218 aa18■□□□□ 0.47
GYPC-205ENST00000464053 FAM184AQ8NB25 1140 aa18■□□□□ 0.47
GYPC-205ENST00000464053 CCDC17Q96LX7 622 aa18■□□□□ 0.47
GYPC-205ENST00000464053 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18■□□□□ 0.47
GYPC-205ENST00000464053 UBE2Q2LH0YL09 131 aa18■□□□□ 0.47
GYPC-205ENST00000464053 GRIN3BO60391 1043 aa18■□□□□ 0.47
GYPC-205ENST00000464053 GDF11O95390 407 aa18■□□□□ 0.47
GYPC-205ENST00000464053 TNNI2P48788 182 aa18■□□□□ 0.47
GYPC-205ENST00000464053 FOSBP53539 338 aa18■□□□□ 0.47
GYPC-205ENST00000464053 NFKBIBQ15653 356 aa18■□□□□ 0.47
GYPC-205ENST00000464053 ANGEL2Q5VTE6 544 aaKnown RBP18■□□□□ 0.47
GYPC-205ENST00000464053 CCDC82Q8N4S0 544 aa18■□□□□ 0.47
GYPC-205ENST00000464053 TEPSINQ96N21 525 aa18■□□□□ 0.47
GYPC-205ENST00000464053 ORC3Q9UBD5 711 aaPredicted RBP18■□□□□ 0.47
GYPC-205ENST00000464053 HERC5Q9UII4 1024 aaKnown RBP18■□□□□ 0.47
GYPC-205ENST00000464053 TAOK2Q9UL54 1235 aa18■□□□□ 0.47
GYPC-205ENST00000464053 WDR33Q9C0J8 1336 aaKnown RBP18■□□□□ 0.47
GYPC-205ENST00000464053 VPS37CA5D8V6 355 aaPredicted RBP17.99■□□□□ 0.47
GYPC-205ENST00000464053 PLEKHA8P1O95397 391 aa17.99■□□□□ 0.47
GYPC-205ENST00000464053 CALM1P0DP23 149 aa17.99■□□□□ 0.47
GYPC-205ENST00000464053 CALM2P0DP24 149 aa17.99■□□□□ 0.47
GYPC-205ENST00000464053 CALM3P0DP25 149 aa17.99■□□□□ 0.47
GYPC-205ENST00000464053 ZSCAN22P10073 491 aaPredicted RBP17.99■□□□□ 0.47
GYPC-205ENST00000464053 PDCP20941 246 aa17.99■□□□□ 0.47
GYPC-205ENST00000464053 MIGA2Q7L4E1 593 aa17.99■□□□□ 0.47
GYPC-205ENST00000464053 RASGRP2Q7LDG7 609 aa17.99■□□□□ 0.47
GYPC-205ENST00000464053 NBPF11Q86T75 865 aa17.99■□□□□ 0.47
GYPC-205ENST00000464053 CHAMP1Q96JM3 812 aa17.99■□□□□ 0.47
GYPC-205ENST00000464053 CDKL5O76039 1030 aa17.98■□□□□ 0.47
GYPC-205ENST00000464053 IFNAR1P17181 557 aa17.98■□□□□ 0.47
GYPC-205ENST00000464053 GUCY1A2P33402 732 aa17.98■□□□□ 0.47
GYPC-205ENST00000464053 TNFAIP1Q13829 316 aa17.98■□□□□ 0.47
GYPC-205ENST00000464053 CPLX2Q6PUV4 134 aaKnown RBP17.98■□□□□ 0.47
GYPC-205ENST00000464053 CDC37L1Q7L3B6 337 aa17.98■□□□□ 0.47
GYPC-205ENST00000464053 MTMR7Q9Y216 660 aa17.98■□□□□ 0.47
GYPC-205ENST00000464053 MYH4Q9Y623 1939 aa17.98■□□□□ 0.47
GYPC-205ENST00000464053 CCDC196A0A1B0GTZ2 297 aa17.98■□□□□ 0.47
GYPC-205ENST00000464053 TOP1P11387 765 aaKnown RBP17.98■□□□□ 0.47
GYPC-205ENST00000464053 PPP2R5BQ15173 497 aa17.98■□□□□ 0.47
GYPC-205ENST00000464053 AIFM3Q96NN9 605 aa17.98■□□□□ 0.47
GYPC-205ENST00000464053 SLC26A6Q9BXS9 759 aa17.98■□□□□ 0.47
GYPC-205ENST00000464053 DEFB129Q9H1M3 183 aa17.98■□□□□ 0.47
GYPC-205ENST00000464053 CLIP2Q9UDT6 1046 aa17.98■□□□□ 0.47
GYPC-205ENST00000464053 POLR2AP24928 1970 aaKnown RBP17.97■□□□□ 0.47
GYPC-205ENST00000464053 TBC1D12O60347 775 aa17.97■□□□□ 0.47
GYPC-205ENST00000464053 LMOD1P29536 600 aaPredicted RBP17.97■□□□□ 0.47
GYPC-205ENST00000464053 FUT2Q10981 343 aa17.97■□□□□ 0.47
GYPC-205ENST00000464053 SEPT2Q15019 361 aa17.97■□□□□ 0.47
GYPC-205ENST00000464053 ABCB5Q2M3G0 1257 aa17.97■□□□□ 0.47
GYPC-205ENST00000464053 CTCFLQ8NI51 663 aaPredicted RBP17.97■□□□□ 0.47
GYPC-205ENST00000464053 RBM28Q9NW13 759 aaKnown RBP17.97■□□□□ 0.47
GYPC-205ENST00000464053 GGA3Q9NZ52 723 aa17.97■□□□□ 0.47
GYPC-205ENST00000464053 FMNL1O95466 1100 aaPredicted RBP17.96■□□□□ 0.47
GYPC-205ENST00000464053 TTLL1O95922 423 aa17.96■□□□□ 0.47
GYPC-205ENST00000464053 MAP3K10Q02779 954 aa17.96■□□□□ 0.47
GYPC-205ENST00000464053 GRM4Q14833 912 aa17.96■□□□□ 0.47
GYPC-205ENST00000464053 TMTC3Q6ZXV5 915 aa17.96■□□□□ 0.47
GYPC-205ENST00000464053 LRRC47Q8N1G4 583 aaKnown RBP17.96■□□□□ 0.47
GYPC-205ENST00000464053 STAG2Q8N3U4 1231 aa17.96■□□□□ 0.47
GYPC-205ENST00000464053 ADARB2Q9NS39 739 aaKnown RBP17.96■□□□□ 0.47
GYPC-205ENST00000464053 GJB4Q9NTQ9 266 aa17.96■□□□□ 0.47
GYPC-205ENST00000464053 MAD2L2Q9UI95 211 aa17.96■□□□□ 0.47
GYPC-205ENST00000464053 F13A1P00488 732 aa17.95■□□□□ 0.46
GYPC-205ENST00000464053 GH2P01242 217 aa17.95■□□□□ 0.46
GYPC-205ENST00000464053 SSRP1Q08945 709 aaKnown RBP17.95■□□□□ 0.46
GYPC-205ENST00000464053 FOXD4L6Q3SYB3 417 aaPredicted RBP17.95■□□□□ 0.46
GYPC-205ENST00000464053 OTUD7BQ6GQQ9 843 aa17.95■□□□□ 0.46
GYPC-205ENST00000464053 DPY19L2Q6NUT2 758 aa17.95■□□□□ 0.46
GYPC-205ENST00000464053 FOXD4L3Q6VB84 417 aaPredicted RBP17.95■□□□□ 0.46
GYPC-205ENST00000464053 SIAH1Q8IUQ4 282 aa17.95■□□□□ 0.46
GYPC-205ENST00000464053 SRBD1Q8N5C6 995 aaKnown RBP17.95■□□□□ 0.46
GYPC-205ENST00000464053 MYH6P13533 1939 aa17.95■□□□□ 0.46
GYPC-205ENST00000464053 BAG4O95429 457 aaKnown RBP17.95■□□□□ 0.46
GYPC-205ENST00000464053 ATP2B2Q01814 1243 aa17.95■□□□□ 0.46
GYPC-205ENST00000464053 GUCY1B3Q02153 619 aa17.95■□□□□ 0.46
GYPC-205ENST00000464053 PRAMEF18Q5VWM3 479 aa17.95■□□□□ 0.46
GYPC-205ENST00000464053 CLEC17AQ6ZS10 378 aa17.95■□□□□ 0.46
GYPC-205ENST00000464053 TMEM179Q6ZVK1 233 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms