RNA–Protein interactions for RNA: ENST00000463948.1

EGFR-209, Transcript of epidermal growth factor receptor, humanhuman

TSL 3

Gene EGFR, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-209ENST00000463948 C7orf61Q8IZ16 206 aa22.84■■□□□ 1.25
EGFR-209ENST00000463948 RIOK1Q9BRS2 568 aaKnown RBP22.84■■□□□ 1.25
EGFR-209ENST00000463948 PLXNB2O15031 1838 aa22.83■■□□□ 1.25
EGFR-209ENST00000463948 MNX1P50219 401 aaPredicted RBP22.83■■□□□ 1.25
EGFR-209ENST00000463948 EVX2Q03828 476 aa22.83■■□□□ 1.25
EGFR-209ENST00000463948 HSP90AB4PQ58FF6 505 aa22.83■■□□□ 1.25
EGFR-209ENST00000463948 WDR78Q5VTH9 848 aa22.83■■□□□ 1.25
EGFR-209ENST00000463948 ANKLE1Q8NAG6 615 aa22.83■■□□□ 1.25
EGFR-209ENST00000463948 SOCS4Q8WXH5 440 aa22.83■■□□□ 1.25
EGFR-209ENST00000463948 DNAJC2Q99543 621 aaKnown RBP22.83■■□□□ 1.25
EGFR-209ENST00000463948 NBPF3Q9H094 633 aa22.83■■□□□ 1.25
EGFR-209ENST00000463948 EHD4Q9H223 541 aa22.83■■□□□ 1.25
EGFR-209ENST00000463948 CABP5Q9NP86 173 aa22.83■■□□□ 1.25
EGFR-209ENST00000463948 ZMYND8Q9ULU4 1186 aaPredicted RBP22.83■■□□□ 1.25
EGFR-209ENST00000463948 GOLIM4O00461 696 aa22.82■■□□□ 1.24
EGFR-209ENST00000463948 XRCC5P13010 732 aaKnown RBP22.82■■□□□ 1.24
EGFR-209ENST00000463948 PDE6AP16499 860 aa22.82■■□□□ 1.24
EGFR-209ENST00000463948 ZKSCAN1P17029 563 aaPredicted RBP22.82■■□□□ 1.24
EGFR-209ENST00000463948 SHMT1P34896 483 aa22.82■■□□□ 1.24
EGFR-209ENST00000463948 CACNB2Q08289 660 aaPredicted RBP22.82■■□□□ 1.24
EGFR-209ENST00000463948 MORN1Q5T089 497 aa22.82■■□□□ 1.24
EGFR-209ENST00000463948 MAP3K21Q5TCX8 1036 aa22.82■■□□□ 1.24
EGFR-209ENST00000463948 USP6NLQ92738 828 aa22.82■■□□□ 1.24
EGFR-209ENST00000463948 CNMDO75829 334 aa22.81■■□□□ 1.24
EGFR-209ENST00000463948 RGS2P41220 211 aa22.81■■□□□ 1.24
EGFR-209ENST00000463948 TTF1Q15361 905 aaPredicted RBP22.81■■□□□ 1.24
EGFR-209ENST00000463948 CATSPERGQ6ZRH7 1159 aa22.81■■□□□ 1.24
EGFR-209ENST00000463948 GTF3C2Q8WUA4 911 aaPredicted RBP22.81■■□□□ 1.24
EGFR-209ENST00000463948 EDC3Q96F86 508 aaKnown RBP22.81■■□□□ 1.24
EGFR-209ENST00000463948 OGDHLQ9ULD0 1010 aa22.81■■□□□ 1.24
EGFR-209ENST00000463948 RABGAP1Q9Y3P9 1069 aa22.81■■□□□ 1.24
EGFR-209ENST00000463948 ZNF532Q9HCE3 1301 aa22.81■■□□□ 1.24
EGFR-209ENST00000463948 MPHOSPH10O00566 681 aaKnown RBP22.8■■□□□ 1.24
EGFR-209ENST00000463948 IFIT2P09913 472 aaKnown RBP22.8■■□□□ 1.24
EGFR-209ENST00000463948 CCND3P30281 292 aaPredicted RBP22.8■■□□□ 1.24
EGFR-209ENST00000463948 GUCY1A2P33402 732 aa22.8■■□□□ 1.24
EGFR-209ENST00000463948 USP14P54578 494 aa22.8■■□□□ 1.24
EGFR-209ENST00000463948 SEPT2Q15019 361 aa22.8■■□□□ 1.24
EGFR-209ENST00000463948 CLASRPQ8N2M8 674 aaKnown RBP22.8■■□□□ 1.24
EGFR-209ENST00000463948 C12orf42Q96LP6 360 aa22.8■■□□□ 1.24
EGFR-209ENST00000463948 CRNKL1Q9BZJ0 848 aaKnown RBP22.8■■□□□ 1.24
EGFR-209ENST00000463948 KIAA1683Q9H0B3 1180 aa22.8■■□□□ 1.24
EGFR-209ENST00000463948 C11orf49Q9H6J7 331 aa22.8■■□□□ 1.24
EGFR-209ENST00000463948 MCM9Q9NXL9 1143 aa22.8■■□□□ 1.24
EGFR-209ENST00000463948 COG6Q9Y2V7 657 aa22.8■■□□□ 1.24
EGFR-209ENST00000463948 SYN1P17600 705 aa22.79■■□□□ 1.24
EGFR-209ENST00000463948 VCAM1P19320 739 aa22.79■■□□□ 1.24
EGFR-209ENST00000463948 SLFNL1Q499Z3 407 aa22.79■■□□□ 1.24
EGFR-209ENST00000463948 SIRT2Q8IXJ6 389 aa22.79■■□□□ 1.24
EGFR-209ENST00000463948 TRMT44Q8IYL2 757 aaKnown RBP22.79■■□□□ 1.24
EGFR-209ENST00000463948 SDR42E1Q8WUS8 393 aa22.79■■□□□ 1.24
EGFR-209ENST00000463948 KIF1BPQ96EK5 621 aa22.79■■□□□ 1.24
EGFR-209ENST00000463948 CYP2D6P10635 497 aa22.78■■□□□ 1.24
EGFR-209ENST00000463948 CCNA1P78396 465 aa22.78■■□□□ 1.24
EGFR-209ENST00000463948 TMED8Q6PL24 325 aaPredicted RBP22.78■■□□□ 1.24
EGFR-209ENST00000463948 RPAP3Q9H6T3 665 aaPredicted RBP22.78■■□□□ 1.24
EGFR-209ENST00000463948 BTBD7Q9P203 1132 aa22.78■■□□□ 1.24
EGFR-209ENST00000463948 ZBED9Q6R2W3 1325 aa22.78■■□□□ 1.24
EGFR-209ENST00000463948 SOX1O00570 391 aaPredicted RBP22.77■■□□□ 1.24
EGFR-209ENST00000463948 MS4A1P11836 297 aa22.77■■□□□ 1.24
EGFR-209ENST00000463948 MAP2K5Q13163 448 aa22.77■■□□□ 1.24
EGFR-209ENST00000463948 RPAP2Q8IXW5 612 aaPredicted RBP22.77■■□□□ 1.24
EGFR-209ENST00000463948 LCORLQ8N3X6 602 aa22.77■■□□□ 1.24
EGFR-209ENST00000463948 ARMT1Q9H993 441 aa22.77■■□□□ 1.24
EGFR-209ENST00000463948 ALPK3Q96L96 1907 aa22.76■■□□□ 1.23
EGFR-209ENST00000463948 TCRBV5S4A2TA0A5A2 114 aa22.76■■□□□ 1.23
EGFR-209ENST00000463948 GLRX3O76003 335 aaKnown RBP22.76■■□□□ 1.23
EGFR-209ENST00000463948 GABPAQ06546 454 aa22.76■■□□□ 1.23
EGFR-209ENST00000463948 LHX8Q68G74 356 aa22.76■■□□□ 1.23
EGFR-209ENST00000463948 SLC44A5Q8NCS7 719 aa22.76■■□□□ 1.23
EGFR-209ENST00000463948 DYNLL2Q96FJ2 89 aa22.76■■□□□ 1.23
EGFR-209ENST00000463948 APBA2Q99767 749 aa22.76■■□□□ 1.23
EGFR-209ENST00000463948 BOLA2Q9H3K6 86 aa22.76■■□□□ 1.23
EGFR-209ENST00000463948 FLRT1Q9NZU1 646 aa22.76■■□□□ 1.23
EGFR-209ENST00000463948 A0A1W2PRG0 241 aa22.75■■□□□ 1.23
EGFR-209ENST00000463948 PRKAB2O43741 272 aa22.75■■□□□ 1.23
EGFR-209ENST00000463948 HMMRO75330 724 aa22.75■■□□□ 1.23
EGFR-209ENST00000463948 PTPREP23469 700 aa22.75■■□□□ 1.23
EGFR-209ENST00000463948 LRCH3Q96II8 777 aa22.75■■□□□ 1.23
EGFR-209ENST00000463948 DCP1AQ9NPI6 582 aaPredicted RBP22.75■■□□□ 1.23
EGFR-209ENST00000463948 ZBTB40Q9NUA8 1239 aa22.75■■□□□ 1.23
EGFR-209ENST00000463948 SPDYE16A6NNV3 312 aaPredicted RBP22.74■■□□□ 1.23
EGFR-209ENST00000463948 GDF15Q99988 308 aa22.74■■□□□ 1.23
EGFR-209ENST00000463948 IVNS1ABPQ9Y6Y0 642 aa22.74■■□□□ 1.23
EGFR-209ENST00000463948 PFASO15067 1338 aa22.74■■□□□ 1.23
EGFR-209ENST00000463948 SLC15A5A6NIM6 579 aa22.73■■□□□ 1.23
EGFR-209ENST00000463948 CNGA1P29973 690 aa22.73■■□□□ 1.23
EGFR-209ENST00000463948 ATP2B2Q01814 1243 aa22.73■■□□□ 1.23
EGFR-209ENST00000463948 MFSD14CQ5VZR4 134 aa22.73■■□□□ 1.23
EGFR-209ENST00000463948 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.73■■□□□ 1.23
EGFR-209ENST00000463948 PAG1Q9NWQ8 432 aa22.73■■□□□ 1.23
EGFR-209ENST00000463948 DDX19BQ9UMR2 479 aa22.73■■□□□ 1.23
EGFR-209ENST00000463948 DDX60LQ5H9U9 1706 aaKnown RBP22.72■■□□□ 1.23
EGFR-209ENST00000463948 A0A1W2PPC1 479 aa22.72■■□□□ 1.23
EGFR-209ENST00000463948 SMIM22K7EJ46 135 aa22.72■■□□□ 1.23
EGFR-209ENST00000463948 RAB11FIP3O75154 756 aa22.72■■□□□ 1.23
EGFR-209ENST00000463948 MBD4O95243 580 aa22.72■■□□□ 1.23
EGFR-209ENST00000463948 CHGBP05060 677 aa22.72■■□□□ 1.23
EGFR-209ENST00000463948 COG2Q14746 738 aa22.72■■□□□ 1.23
EGFR-209ENST00000463948 KIAA1755Q5JYT7 1200 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms