RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 RREB1Q92766 1687 aa19.34■□□□□ 0.69
ACTB-207ENST00000462494 DUOX1Q9NRD9 1551 aa19.33■□□□□ 0.69
ACTB-207ENST00000462494 MECOMQ03112 1051 aa19.33■□□□□ 0.69
ACTB-207ENST00000462494 ZNF174Q15697 407 aa19.33■□□□□ 0.69
ACTB-207ENST00000462494 NOM1Q5C9Z4 860 aaKnown RBP19.33■□□□□ 0.69
ACTB-207ENST00000462494 FAM47AQ5JRC9 791 aa19.33■□□□□ 0.69
ACTB-207ENST00000462494 TBC1D9BQ66K14 1250 aa19.33■□□□□ 0.69
ACTB-207ENST00000462494 ENOX1Q8TC92 643 aaKnown RBP19.33■□□□□ 0.69
ACTB-207ENST00000462494 FEZ1Q99689 392 aa19.33■□□□□ 0.69
ACTB-207ENST00000462494 SAMSN1Q9NSI8 373 aaKnown RBP19.33■□□□□ 0.69
ACTB-207ENST00000462494 DNAI1Q9UI46 699 aa19.33■□□□□ 0.69
ACTB-207ENST00000462494 COL22A1Q8NFW1 1626 aaPredicted RBP19.33■□□□□ 0.69
ACTB-207ENST00000462494 A0A087X0B3 334 aa19.33■□□□□ 0.68
ACTB-207ENST00000462494 WNT7AO00755 349 aa19.33■□□□□ 0.68
ACTB-207ENST00000462494 CASP1P29466 404 aa19.33■□□□□ 0.68
ACTB-207ENST00000462494 CCDC24Q8N4L8 307 aa19.33■□□□□ 0.68
ACTB-207ENST00000462494 TRIML1Q8N9V2 468 aa19.33■□□□□ 0.68
ACTB-207ENST00000462494 SYMPKQ92797 1274 aaKnown RBP19.33■□□□□ 0.68
ACTB-207ENST00000462494 NSUN4Q96CB9 384 aaKnown RBP19.33■□□□□ 0.68
ACTB-207ENST00000462494 CALM1P0DP23 149 aa19.32■□□□□ 0.68
ACTB-207ENST00000462494 CALM2P0DP24 149 aa19.32■□□□□ 0.68
ACTB-207ENST00000462494 CALM3P0DP25 149 aa19.32■□□□□ 0.68
ACTB-207ENST00000462494 SLC4A8Q2Y0W8 1093 aa19.32■□□□□ 0.68
ACTB-207ENST00000462494 KLHL10Q6JEL2 608 aa19.32■□□□□ 0.68
ACTB-207ENST00000462494 CCDC34Q96HJ3 373 aa19.32■□□□□ 0.68
ACTB-207ENST00000462494 JAG2Q9Y219 1238 aa19.32■□□□□ 0.68
ACTB-207ENST00000462494 SPATA31A5Q5VU36 1347 aa19.32■□□□□ 0.68
ACTB-207ENST00000462494 SPATA31A7Q8IWB4 1347 aa19.32■□□□□ 0.68
ACTB-207ENST00000462494 ZNF18P17022 549 aa19.32■□□□□ 0.68
ACTB-207ENST00000462494 PLCD1P51178 756 aa19.32■□□□□ 0.68
ACTB-207ENST00000462494 ETF1P62495 437 aaKnown RBP19.32■□□□□ 0.68
ACTB-207ENST00000462494 TMTC3Q6ZXV5 915 aa19.32■□□□□ 0.68
ACTB-207ENST00000462494 MED15Q96RN5 788 aa19.32■□□□□ 0.68
ACTB-207ENST00000462494 NOL10Q9BSC4 688 aaKnown RBP19.32■□□□□ 0.68
ACTB-207ENST00000462494 ADKP55263 362 aaKnown RBP19.31■□□□□ 0.68
ACTB-207ENST00000462494 KMT5BQ4FZB7 885 aa19.31■□□□□ 0.68
ACTB-207ENST00000462494 SPECC1LQ69YQ0 1117 aa19.31■□□□□ 0.68
ACTB-207ENST00000462494 FBXO33Q7Z6M2 555 aa19.31■□□□□ 0.68
ACTB-207ENST00000462494 FAM177A1Q8N128 213 aaPredicted RBP19.31■□□□□ 0.68
ACTB-207ENST00000462494 ZNF397Q8NF99 534 aaPredicted RBP19.31■□□□□ 0.68
ACTB-207ENST00000462494 CTCFLQ8NI51 663 aaPredicted RBP19.31■□□□□ 0.68
ACTB-207ENST00000462494 L2HGDHQ9H9P8 463 aa19.31■□□□□ 0.68
ACTB-207ENST00000462494 DDAH1O94760 285 aa19.31■□□□□ 0.68
ACTB-207ENST00000462494 RPS8P62241 208 aaKnown RBP19.31■□□□□ 0.68
ACTB-207ENST00000462494 SRBD1Q8N5C6 995 aaKnown RBP19.31■□□□□ 0.68
ACTB-207ENST00000462494 BAG1Q99933 345 aaPredicted RBP19.31■□□□□ 0.68
ACTB-207ENST00000462494 CRNKL1Q9BZJ0 848 aaKnown RBP19.31■□□□□ 0.68
ACTB-207ENST00000462494 OGFRQ9NZT2 677 aa19.31■□□□□ 0.68
ACTB-207ENST00000462494 VWA3AA6NCI4 1184 aa19.3■□□□□ 0.68
ACTB-207ENST00000462494 ARHGAP6O43182 974 aa19.3■□□□□ 0.68
ACTB-207ENST00000462494 TUBB4AP04350 444 aa19.3■□□□□ 0.68
ACTB-207ENST00000462494 FGRP09769 529 aa19.3■□□□□ 0.68
ACTB-207ENST00000462494 CYP2D6P10635 497 aa19.3■□□□□ 0.68
ACTB-207ENST00000462494 PCP11498 1178 aaKnown RBP19.3■□□□□ 0.68
ACTB-207ENST00000462494 PRDX5P30044 214 aa19.3■□□□□ 0.68
ACTB-207ENST00000462494 HIBADHP31937 336 aaKnown RBP19.3■□□□□ 0.68
ACTB-207ENST00000462494 STX17P56962 302 aa19.3■□□□□ 0.68
ACTB-207ENST00000462494 TTC38Q5R3I4 469 aa19.3■□□□□ 0.68
ACTB-207ENST00000462494 LRRN4CLQ8ND94 238 aa19.3■□□□□ 0.68
ACTB-207ENST00000462494 SPATA20Q8TB22 786 aa19.3■□□□□ 0.68
ACTB-207ENST00000462494 PAGE5Q96GU1 130 aa19.3■□□□□ 0.68
ACTB-207ENST00000462494 DCP1AQ9NPI6 582 aaPredicted RBP19.3■□□□□ 0.68
ACTB-207ENST00000462494 AHDC1Q5TGY3 1603 aaPredicted RBP19.3■□□□□ 0.68
ACTB-207ENST00000462494 ZSCAN12O43309 604 aa19.29■□□□□ 0.68
ACTB-207ENST00000462494 SLFN14P0C7P3 912 aa19.29■□□□□ 0.68
ACTB-207ENST00000462494 TBX2Q13207 712 aaPredicted RBP19.29■□□□□ 0.68
ACTB-207ENST00000462494 TMEM139Q8IV31 216 aa19.29■□□□□ 0.68
ACTB-207ENST00000462494 REXO1L1PQ8IX06 675 aa19.29■□□□□ 0.68
ACTB-207ENST00000462494 FERMT2Q96AC1 680 aa19.29■□□□□ 0.68
ACTB-207ENST00000462494 DNAJC5Q9H3Z4 198 aa19.29■□□□□ 0.68
ACTB-207ENST00000462494 NLRP5P59047 1200 aa19.29■□□□□ 0.68
ACTB-207ENST00000462494 PTGDRQ13258 359 aa19.29■□□□□ 0.68
ACTB-207ENST00000462494 ERCC6LQ2NKX8 1250 aa19.29■□□□□ 0.68
ACTB-207ENST00000462494 CCDC93Q567U6 631 aa19.29■□□□□ 0.68
ACTB-207ENST00000462494 FBXO38Q6PIJ6 1188 aa19.29■□□□□ 0.68
ACTB-207ENST00000462494 CNTNAP5Q8WYK1 1306 aa19.29■□□□□ 0.68
ACTB-207ENST00000462494 STAMQ92783 540 aa19.29■□□□□ 0.68
ACTB-207ENST00000462494 NLRP3Q96P20 1036 aa19.29■□□□□ 0.68
ACTB-207ENST00000462494 BAZ2BQ9UIF8 2168 aaKnown RBP19.29■□□□□ 0.68
ACTB-207ENST00000462494 PPP2R2CQ9Y2T4 447 aa19.29■□□□□ 0.68
ACTB-207ENST00000462494 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.29■□□□□ 0.683e-23■□□□□ 10.8
ACTB-207ENST00000462494 A0A1B0GUL6 1792 aa19.28■□□□□ 0.68
ACTB-207ENST00000462494 TSPY2A6NKD2 308 aa19.28■□□□□ 0.68
ACTB-207ENST00000462494 SEMA3EO15041 775 aa19.28■□□□□ 0.68
ACTB-207ENST00000462494 ZSCAN20P17040 1043 aaPredicted RBP19.28■□□□□ 0.68
ACTB-207ENST00000462494 ERCC5P28715 1186 aaPredicted RBP19.28■□□□□ 0.68
ACTB-207ENST00000462494 TRIM65Q6PJ69 517 aa19.28■□□□□ 0.68
ACTB-207ENST00000462494 PIK3AP1Q6ZUJ8 805 aa19.28■□□□□ 0.68
ACTB-207ENST00000462494 NBPF5PQ86XG9 351 aaPredicted RBP19.28■□□□□ 0.68
ACTB-207ENST00000462494 SMYD4Q8IYR2 804 aaPredicted RBP19.28■□□□□ 0.68
ACTB-207ENST00000462494 SRP68Q9UHB9 627 aaKnown RBP19.28■□□□□ 0.68
ACTB-207ENST00000462494 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.28■□□□□ 0.683e-23■■□□□ 14.2
ACTB-207ENST00000462494 PHLPP2Q6ZVD8 1323 aa19.28■□□□□ 0.68
ACTB-207ENST00000462494 BMP15O95972 392 aa19.28■□□□□ 0.68
ACTB-207ENST00000462494 NPY5RQ15761 445 aa19.28■□□□□ 0.68
ACTB-207ENST00000462494 FAM98CQ17RN3 349 aaKnown RBP19.28■□□□□ 0.68
ACTB-207ENST00000462494 TC2NQ8N9U0 490 aa19.28■□□□□ 0.68
ACTB-207ENST00000462494 SETDB2Q96T68 719 aa19.28■□□□□ 0.68
ACTB-207ENST00000462494 DDX41Q9UJV9 622 aaKnown RBP19.28■□□□□ 0.68
ACTB-207ENST00000462494 NRAPQ86VF7 1730 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 181.9 ms