RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 MAP3K11Q16584 847 aa6.51□□□□□ -1.37
SF3A3-202ENST00000460925 PERM1Q5SV97 790 aa6.51□□□□□ -1.37
SF3A3-202ENST00000460925 NBPF6Q5VWK0 638 aa6.51□□□□□ -1.37
SF3A3-202ENST00000460925 PCNX4Q63HM2 1172 aa6.51□□□□□ -1.37
SF3A3-202ENST00000460925 SCARA3Q6AZY7 606 aa6.51□□□□□ -1.37
SF3A3-202ENST00000460925 FAM196AQ6ZSG2 479 aa6.51□□□□□ -1.37
SF3A3-202ENST00000460925 FAM35AQ86V20 835 aa6.51□□□□□ -1.37
SF3A3-202ENST00000460925 MORC1Q86VD1 984 aa6.51□□□□□ -1.37
SF3A3-202ENST00000460925 TICAM2Q86XR7 235 aa6.51□□□□□ -1.37
SF3A3-202ENST00000460925 SLITRK4Q8IW52 837 aa6.51□□□□□ -1.37
SF3A3-202ENST00000460925 NPAS3Q8IXF0 933 aa6.51□□□□□ -1.37
SF3A3-202ENST00000460925 FAM177A1Q8N128 213 aaPredicted RBP6.51□□□□□ -1.37
SF3A3-202ENST00000460925 COG3Q96JB2 828 aa6.51□□□□□ -1.37
SF3A3-202ENST00000460925 NBPF4Q96M43 638 aa6.51□□□□□ -1.37
SF3A3-202ENST00000460925 NAGPAQ9UK23 515 aa6.51□□□□□ -1.37
SF3A3-202ENST00000460925 CYP8B1Q9UNU6 501 aa6.51□□□□□ -1.37
SF3A3-202ENST00000460925 SAMM50Q9Y512 469 aa6.51□□□□□ -1.37
SF3A3-202ENST00000460925 NSD2O96028 1365 aa6.51□□□□□ -1.37
SF3A3-202ENST00000460925 LMO7Q8WWI1 1683 aa6.5□□□□□ -1.37
SF3A3-202ENST00000460925 COL3A1P02461 1466 aaPredicted RBP6.5□□□□□ -1.37
SF3A3-202ENST00000460925 ARHGEF10O15013 1369 aa6.5□□□□□ -1.37
SF3A3-202ENST00000460925 NPC1L1Q9UHC9 1359 aa6.5□□□□□ -1.37
SF3A3-202ENST00000460925 F6X3S4 739 aa6.5□□□□□ -1.37
SF3A3-202ENST00000460925 PPM1GO15355 546 aaPredicted RBP6.5□□□□□ -1.37
SF3A3-202ENST00000460925 ANP32CO43423 234 aa6.5□□□□□ -1.37
SF3A3-202ENST00000460925 STK10O94804 968 aaKnown RBP6.5□□□□□ -1.37
SF3A3-202ENST00000460925 BMP6P22004 513 aa6.5□□□□□ -1.37
SF3A3-202ENST00000460925 ADH7P40394 386 aa6.5□□□□□ -1.37
SF3A3-202ENST00000460925 NASPP49321 788 aaPredicted RBP6.5□□□□□ -1.37
SF3A3-202ENST00000460925 PCDH1Q08174 1060 aa6.5□□□□□ -1.37
SF3A3-202ENST00000460925 GAS6Q14393 721 aa6.5□□□□□ -1.37
SF3A3-202ENST00000460925 CHRNA2Q15822 529 aa6.5□□□□□ -1.37
SF3A3-202ENST00000460925 ZNF423Q2M1K9 1284 aa6.5□□□□□ -1.37
SF3A3-202ENST00000460925 GOLM1Q8NBJ4 401 aa6.5□□□□□ -1.37
SF3A3-202ENST00000460925 LPIN3Q9BQK8 851 aa6.5□□□□□ -1.37
SF3A3-202ENST00000460925 IGFLR1Q9H665 355 aa6.5□□□□□ -1.37
SF3A3-202ENST00000460925 GINM1Q9NU53 330 aa6.5□□□□□ -1.37
SF3A3-202ENST00000460925 GPN3Q9UHW5 284 aaPredicted RBP6.5□□□□□ -1.37
SF3A3-202ENST00000460925 NRAPQ86VF7 1730 aa6.5□□□□□ -1.37
SF3A3-202ENST00000460925 MAP3K19Q56UN5 1328 aa6.5□□□□□ -1.37
SF3A3-202ENST00000460925 BRD4O60885 1362 aaPredicted RBP6.49□□□□□ -1.37
SF3A3-202ENST00000460925 KIAA0232Q92628 1395 aa6.49□□□□□ -1.37
SF3A3-202ENST00000460925 CPB1P15086 417 aa6.49□□□□□ -1.37
SF3A3-202ENST00000460925 NME2P22392 152 aa6.49□□□□□ -1.37
SF3A3-202ENST00000460925 PPP2R1AP30153 589 aa6.49□□□□□ -1.37
SF3A3-202ENST00000460925 FAM160A1Q05DH4 1040 aa6.49□□□□□ -1.37
SF3A3-202ENST00000460925 CCDC144BQ3MJ40 725 aa6.49□□□□□ -1.37
SF3A3-202ENST00000460925 SNAP47Q5SQN1 464 aa6.49□□□□□ -1.37
SF3A3-202ENST00000460925 ELMSAN1Q6PJG2 1045 aa6.49□□□□□ -1.37
SF3A3-202ENST00000460925 ADAMTSL4Q6UY14 1074 aa6.49□□□□□ -1.37
SF3A3-202ENST00000460925 MICALL1Q8N3F8 863 aa6.49□□□□□ -1.37
SF3A3-202ENST00000460925 NAP1L5Q96NT1 182 aaPredicted RBP6.49□□□□□ -1.37
SF3A3-202ENST00000460925 NSFL1CQ9UNZ2 370 aaKnown RBP6.49□□□□□ -1.37
SF3A3-202ENST00000460925 EFR3BQ9Y2G0 817 aa6.49□□□□□ -1.37
SF3A3-202ENST00000460925 SMG6Q86US8 1419 aaKnown RBP6.49□□□□□ -1.37
SF3A3-202ENST00000460925 MYBBP1AQ9BQG0 1328 aaKnown RBP6.49□□□□□ -1.37
SF3A3-202ENST00000460925 JCADQ9P266 1359 aa6.48□□□□□ -1.37
SF3A3-202ENST00000460925 ELOA3CA0A087WX78 387 aaPredicted RBP6.48□□□□□ -1.37
SF3A3-202ENST00000460925 FAM221AA4D161 298 aa6.48□□□□□ -1.37
SF3A3-202ENST00000460925 ELOA3DA6NLF2 546 aaPredicted RBP6.48□□□□□ -1.37
SF3A3-202ENST00000460925 EIF4EBP3O60516 100 aaPredicted RBP6.48□□□□□ -1.37
SF3A3-202ENST00000460925 ADAMTS2O95450 1211 aa6.48□□□□□ -1.37
SF3A3-202ENST00000460925 GCP02774 474 aa6.48□□□□□ -1.37
SF3A3-202ENST00000460925 ESRRAP11474 423 aaPredicted RBP6.48□□□□□ -1.37
SF3A3-202ENST00000460925 NFX1Q12986 1120 aaKnown RBP6.48□□□□□ -1.37
SF3A3-202ENST00000460925 LRRC14Q15048 493 aa6.48□□□□□ -1.37
SF3A3-202ENST00000460925 ELOA3BQ3SY89 546 aa6.48□□□□□ -1.37
SF3A3-202ENST00000460925 GIMAP6Q6P9H5 292 aa6.48□□□□□ -1.37
SF3A3-202ENST00000460925 FCHSD1Q86WN1 690 aa6.48□□□□□ -1.37
SF3A3-202ENST00000460925 ELOA3Q8NG57 546 aa6.48□□□□□ -1.37
SF3A3-202ENST00000460925 LRRC59Q96AG4 307 aaKnown RBP6.48□□□□□ -1.37
SF3A3-202ENST00000460925 SMG9Q9H0W8 520 aaKnown RBP6.48□□□□□ -1.37
SF3A3-202ENST00000460925 SOX17Q9H6I2 414 aaPredicted RBP6.48□□□□□ -1.37
SF3A3-202ENST00000460925 MBIPQ9NS73 344 aa6.48□□□□□ -1.37
SF3A3-202ENST00000460925 UBP1Q9NZI7 540 aa6.48□□□□□ -1.37
SF3A3-202ENST00000460925 POLKQ9UBT6 870 aa6.48□□□□□ -1.37
SF3A3-202ENST00000460925 COL14A1Q05707 1796 aaKnown RBP6.48□□□□□ -1.37
SF3A3-202ENST00000460925 RGPD1P0DJD0 1748 aa6.47□□□□□ -1.37
SF3A3-202ENST00000460925 CDK12Q9NYV4 1490 aaPredicted RBP6.47□□□□□ -1.37
SF3A3-202ENST00000460925 CAMTA1Q9Y6Y1 1673 aa6.47□□□□□ -1.37
SF3A3-202ENST00000460925 SMARCA5O60264 1052 aaPredicted RBP6.47□□□□□ -1.37
SF3A3-202ENST00000460925 F13A1P00488 732 aa6.47□□□□□ -1.37
SF3A3-202ENST00000460925 SSBP05455 408 aaKnown RBP eCLIP6.47□□□□□ -1.37
SF3A3-202ENST00000460925 ARNTP27540 789 aa6.47□□□□□ -1.37
SF3A3-202ENST00000460925 CRKP46108 304 aa6.47□□□□□ -1.37
SF3A3-202ENST00000460925 MTHFSP49914 203 aa6.47□□□□□ -1.37
SF3A3-202ENST00000460925 TBC1D8BQ0IIM8 1120 aa6.47□□□□□ -1.37
SF3A3-202ENST00000460925 APOBRQ0VD83 1088 aa6.47□□□□□ -1.37
SF3A3-202ENST00000460925 SULF2Q8IWU5 870 aa6.47□□□□□ -1.37
SF3A3-202ENST00000460925 CKAP2LQ8IYA6 745 aa6.47□□□□□ -1.37
SF3A3-202ENST00000460925 FBXO41Q8TF61 875 aa6.47□□□□□ -1.37
SF3A3-202ENST00000460925 GATAD2BQ8WXI9 593 aa6.47□□□□□ -1.37
SF3A3-202ENST00000460925 NKD1Q969G9 470 aa6.47□□□□□ -1.37
SF3A3-202ENST00000460925 EMILIN2Q9BXX0 1053 aa6.47□□□□□ -1.37
SF3A3-202ENST00000460925 MIR1-1HGQ9H1L0 117 aa6.47□□□□□ -1.37
SF3A3-202ENST00000460925 OSBPL2Q9H1P3 480 aa6.47□□□□□ -1.37
SF3A3-202ENST00000460925 TRIM33Q9UPN9 1127 aa6.47□□□□□ -1.37
SF3A3-202ENST00000460925 AATKQ6ZMQ8 1374 aa6.46□□□□□ -1.37
SF3A3-202ENST00000460925 FAM208AQ9UK61 1670 aaKnown RBP6.46□□□□□ -1.37
SF3A3-202ENST00000460925 WNK3Q9BYP7 1800 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms