RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 USP17L12C9JPN9 530 aa22.75■■□□□ 1.23
COL5A1-203ENST00000460264 USP17L21D6R901 530 aa22.75■■□□□ 1.23
COL5A1-203ENST00000460264 SMIM22K7EJ46 135 aa22.75■■□□□ 1.23
COL5A1-203ENST00000460264 MPHOSPH10O00566 681 aaKnown RBP22.75■■□□□ 1.23
COL5A1-203ENST00000460264 ERC2O15083 957 aa22.75■■□□□ 1.23
COL5A1-203ENST00000460264 MX1P20591 662 aa22.75■■□□□ 1.23
COL5A1-203ENST00000460264 USP14P54578 494 aa22.75■■□□□ 1.23
COL5A1-203ENST00000460264 SLAIN1Q8ND83 568 aa22.75■■□□□ 1.23
COL5A1-203ENST00000460264 OSBP2Q969R2 916 aa22.75■■□□□ 1.23
COL5A1-203ENST00000460264 STRBPQ96SI9 672 aaKnown RBP22.75■■□□□ 1.23
COL5A1-203ENST00000460264 SALL3Q9BXA9 1300 aa22.75■■□□□ 1.23
COL5A1-203ENST00000460264 RNF113AO15541 343 aaKnown RBP22.74■■□□□ 1.23
COL5A1-203ENST00000460264 GLRX3O76003 335 aaKnown RBP22.74■■□□□ 1.23
COL5A1-203ENST00000460264 ZFYP08048 801 aaPredicted RBP22.74■■□□□ 1.23
COL5A1-203ENST00000460264 IRF5Q13568 498 aa22.74■■□□□ 1.23
COL5A1-203ENST00000460264 MTFR1Q15390 333 aa22.74■■□□□ 1.23
COL5A1-203ENST00000460264 AMOTL1Q8IY63 956 aa22.74■■□□□ 1.23
COL5A1-203ENST00000460264 COA7Q96BR5 231 aa22.74■■□□□ 1.23
COL5A1-203ENST00000460264 MKI67P46013 3256 aaKnown RBP22.74■■□□□ 1.23
COL5A1-203ENST00000460264 VCAM1P19320 739 aa22.73■■□□□ 1.23
COL5A1-203ENST00000460264 AAMPQ13685 434 aa22.73■■□□□ 1.23
COL5A1-203ENST00000460264 CTR9Q6PD62 1173 aa22.73■■□□□ 1.23
COL5A1-203ENST00000460264 TMEM179Q6ZVK1 233 aa22.73■■□□□ 1.23
COL5A1-203ENST00000460264 TXNRD2Q9NNW7 524 aa22.73■■□□□ 1.23
COL5A1-203ENST00000460264 GREB1LQ9C091 1923 aaPredicted RBP22.72■■□□□ 1.23
COL5A1-203ENST00000460264 ADCY3O60266 1144 aa22.72■■□□□ 1.23
COL5A1-203ENST00000460264 PEX10O60683 326 aa22.72■■□□□ 1.23
COL5A1-203ENST00000460264 ANKRD45Q5TZF3 282 aa22.72■■□□□ 1.23
COL5A1-203ENST00000460264 C16orf86Q6ZW13 317 aa22.72■■□□□ 1.23
COL5A1-203ENST00000460264 GTF3C2Q8WUA4 911 aaPredicted RBP22.72■■□□□ 1.23
COL5A1-203ENST00000460264 GCC1Q96CN9 775 aa22.72■■□□□ 1.23
COL5A1-203ENST00000460264 ARPP21Q9UBL0 812 aaPredicted RBP22.72■■□□□ 1.23
COL5A1-203ENST00000460264 BIN2Q9UBW5 565 aaPredicted RBP22.72■■□□□ 1.23
COL5A1-203ENST00000460264 A0A1W2PRG0 241 aa22.71■■□□□ 1.23
COL5A1-203ENST00000460264 GSG1L2A8MUP6 293 aa22.71■■□□□ 1.23
COL5A1-203ENST00000460264 USP17L15C9J2P7 530 aa22.71■■□□□ 1.23
COL5A1-203ENST00000460264 USP17L13C9JLJ4 530 aa22.71■■□□□ 1.23
COL5A1-203ENST00000460264 USP17L11C9JVI0 530 aa22.71■■□□□ 1.23
COL5A1-203ENST00000460264 USP17L18D6R9N7 530 aa22.71■■□□□ 1.23
COL5A1-203ENST00000460264 USP17L22D6RA61 530 aa22.71■■□□□ 1.23
COL5A1-203ENST00000460264 USP17L17D6RBQ6 530 aa22.71■■□□□ 1.23
COL5A1-203ENST00000460264 USP17L19D6RCP7 530 aa22.71■■□□□ 1.23
COL5A1-203ENST00000460264 USP17L20D6RJB6 530 aa22.71■■□□□ 1.23
COL5A1-203ENST00000460264 M0R2C6 588 aa22.71■■□□□ 1.23
COL5A1-203ENST00000460264 AKR1B1P15121 316 aa22.71■■□□□ 1.23
COL5A1-203ENST00000460264 ELNP15502 786 aa22.71■■□□□ 1.23
COL5A1-203ENST00000460264 CDK8P49336 464 aa22.71■■□□□ 1.23
COL5A1-203ENST00000460264 USP17L24Q0WX57 530 aa22.71■■□□□ 1.23
COL5A1-203ENST00000460264 LRRFIP1Q32MZ4 808 aaKnown RBP22.71■■□□□ 1.23
COL5A1-203ENST00000460264 POTEEQ6S8J3 1075 aa22.71■■□□□ 1.23
COL5A1-203ENST00000460264 GPRC5AQ8NFJ5 357 aa22.71■■□□□ 1.23
COL5A1-203ENST00000460264 PXYLP1Q8TE99 480 aa22.71■■□□□ 1.23
COL5A1-203ENST00000460264 RBPJLQ9UBG7 517 aa22.71■■□□□ 1.23
COL5A1-203ENST00000460264 ZBTB47Q9UFB7 747 aaPredicted RBP22.71■■□□□ 1.23
COL5A1-203ENST00000460264 RLFQ13129 1914 aa22.7■■□□□ 1.23
COL5A1-203ENST00000460264 GPAA1O43292 621 aa22.7■■□□□ 1.22
COL5A1-203ENST00000460264 UBXN2AP68543 259 aa22.7■■□□□ 1.22
COL5A1-203ENST00000460264 GIMAP6Q6P9H5 292 aa22.7■■□□□ 1.22
COL5A1-203ENST00000460264 CLEC10AQ8IUN9 316 aa22.7■■□□□ 1.22
COL5A1-203ENST00000460264 CCDC17Q96LX7 622 aa22.7■■□□□ 1.22
COL5A1-203ENST00000460264 A0A0G2JMZ2 1700 aa22.7■■□□□ 1.22
COL5A1-203ENST00000460264 PARP14Q460N5 1801 aa22.7■■□□□ 1.22
COL5A1-203ENST00000460264 CCL5P13501 91 aa22.69■■□□□ 1.22
COL5A1-203ENST00000460264 ERVK-9P63128 1117 aa22.69■■□□□ 1.22
COL5A1-203ENST00000460264 ERVK-24P63145 666 aa22.69■■□□□ 1.22
COL5A1-203ENST00000460264 SBK1Q52WX2 424 aa22.69■■□□□ 1.22
COL5A1-203ENST00000460264 CATSPERGQ6ZRH7 1159 aa22.69■■□□□ 1.22
COL5A1-203ENST00000460264 PAGR1Q9BTK6 254 aa22.69■■□□□ 1.22
COL5A1-203ENST00000460264 FSD1Q9BTV5 496 aa22.69■■□□□ 1.22
COL5A1-203ENST00000460264 RPAP3Q9H6T3 665 aaPredicted RBP22.69■■□□□ 1.22
COL5A1-203ENST00000460264 ROBO3Q96MS0 1386 aa22.68■■□□□ 1.22
COL5A1-203ENST00000460264 INHAP05111 366 aa22.68■■□□□ 1.22
COL5A1-203ENST00000460264 ICA1Q05084 483 aa22.68■■□□□ 1.22
COL5A1-203ENST00000460264 EPB41L4AQ9HCS5 686 aaPredicted RBP22.68■■□□□ 1.22
COL5A1-203ENST00000460264 GJD2Q9UKL4 321 aa22.68■■□□□ 1.22
COL5A1-203ENST00000460264 GNAT2P19087 354 aa22.67■■□□□ 1.22
COL5A1-203ENST00000460264 SIAH1Q8IUQ4 282 aa22.67■■□□□ 1.22
COL5A1-203ENST00000460264 SHISA4Q96DD7 197 aa22.67■■□□□ 1.22
COL5A1-203ENST00000460264 RNF208Q9H0X6 261 aa22.67■■□□□ 1.22
COL5A1-203ENST00000460264 ARHGEF10LQ9HCE6 1279 aa22.67■■□□□ 1.22
COL5A1-203ENST00000460264 STAP2Q9UGK3 403 aa22.67■■□□□ 1.22
COL5A1-203ENST00000460264 RABGAP1Q9Y3P9 1069 aa22.67■■□□□ 1.22
COL5A1-203ENST00000460264 GJB1P08034 283 aa22.66■■□□□ 1.22
COL5A1-203ENST00000460264 MAPK4P31152 587 aa22.66■■□□□ 1.22
COL5A1-203ENST00000460264 Q3C1V9 767 aa22.66■■□□□ 1.22
COL5A1-203ENST00000460264 PRPF38BQ5VTL8 546 aaKnown RBP22.66■■□□□ 1.22
COL5A1-203ENST00000460264 LBX2Q6XYB7 198 aa22.66■■□□□ 1.22
COL5A1-203ENST00000460264 SEC62Q99442 399 aaKnown RBP22.66■■□□□ 1.22
COL5A1-203ENST00000460264 UNC93B1Q9H1C4 597 aa22.66■■□□□ 1.22
COL5A1-203ENST00000460264 PORCNQ9H237 461 aa22.66■■□□□ 1.22
COL5A1-203ENST00000460264 SPDYE16A6NNV3 312 aaPredicted RBP22.65■■□□□ 1.22
COL5A1-203ENST00000460264 CNMDO75829 334 aa22.65■■□□□ 1.22
COL5A1-203ENST00000460264 PDE1AP54750 535 aa22.65■■□□□ 1.22
COL5A1-203ENST00000460264 KIAA1755Q5JYT7 1200 aa22.65■■□□□ 1.22
COL5A1-203ENST00000460264 ZMYM1Q5SVZ6 1142 aa22.65■■□□□ 1.22
COL5A1-203ENST00000460264 EXOC6Q8TAG9 804 aa22.65■■□□□ 1.22
COL5A1-203ENST00000460264 SH2D4AQ9H788 454 aa22.65■■□□□ 1.22
COL5A1-203ENST00000460264 TMX2Q9Y320 296 aa22.65■■□□□ 1.22
COL5A1-203ENST00000460264 MINDY4BA8MYZ0 360 aa22.64■■□□□ 1.21
COL5A1-203ENST00000460264 GJA8P48165 433 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms