RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 KIF1AQ12756 1690 aa15.5■□□□□ 0.07
PTPRE-204ENST00000455661 CPP00450 1065 aa15.5■□□□□ 0.07
PTPRE-204ENST00000455661 ABL1P00519 1130 aa15.5■□□□□ 0.07
PTPRE-204ENST00000455661 CABP4P57796 275 aa15.5■□□□□ 0.07
PTPRE-204ENST00000455661 STIM1Q13586 685 aa15.5■□□□□ 0.07
PTPRE-204ENST00000455661 SLF1Q9BQI6 1058 aa15.5■□□□□ 0.07
PTPRE-204ENST00000455661 AATFQ9NY61 560 aaKnown RBP eCLIP15.5■□□□□ 0.07
PTPRE-204ENST00000455661 HPCAL4Q9UM19 191 aa15.5■□□□□ 0.07
PTPRE-204ENST00000455661 PRPF6O94906 941 aaKnown RBP15.49■□□□□ 0.07
PTPRE-204ENST00000455661 CCT6AP40227 531 aaKnown RBP15.49■□□□□ 0.07
PTPRE-204ENST00000455661 SPAG1Q07617 926 aa15.49■□□□□ 0.07
PTPRE-204ENST00000455661 TTLL7Q6ZT98 887 aa15.49■□□□□ 0.07
PTPRE-204ENST00000455661 USP49Q70CQ1 688 aa15.49■□□□□ 0.07
PTPRE-204ENST00000455661 TADA2BQ86TJ2 420 aa15.49■□□□□ 0.07
PTPRE-204ENST00000455661 NKX2-3Q8TAU0 364 aa15.49■□□□□ 0.07
PTPRE-204ENST00000455661 PAGE5Q96GU1 130 aa15.49■□□□□ 0.07
PTPRE-204ENST00000455661 RPGRIP1Q96KN7 1286 aa15.49■□□□□ 0.07
PTPRE-204ENST00000455661 CRACR2AQ9BSW2 395 aa15.49■□□□□ 0.07
PTPRE-204ENST00000455661 PLEKHA4Q9H4M7 779 aa15.49■□□□□ 0.07
PTPRE-204ENST00000455661 STRN4Q9NRL3 753 aa15.49■□□□□ 0.07
PTPRE-204ENST00000455661 TARSL2A2RTX5 802 aaKnown RBP15.49■□□□□ 0.07
PTPRE-204ENST00000455661 DEXIO95424 95 aa15.49■□□□□ 0.07
PTPRE-204ENST00000455661 GUCY1A2P33402 732 aa15.49■□□□□ 0.07
PTPRE-204ENST00000455661 NBPF14Q5TI25 921 aa15.49■□□□□ 0.07
PTPRE-204ENST00000455661 PI16Q6UXB8 463 aa15.49■□□□□ 0.07
PTPRE-204ENST00000455661 TRAPPC11Q7Z392 1133 aa15.49■□□□□ 0.07
PTPRE-204ENST00000455661 LIMA1Q9UHB6 759 aaKnown RBP15.49■□□□□ 0.07
PTPRE-204ENST00000455661 GUCA1BQ9UMX6 200 aa15.49■□□□□ 0.07
PTPRE-204ENST00000455661 PPP1R3GB7ZBB8 358 aa15.48■□□□□ 0.07
PTPRE-204ENST00000455661 ANKRD65E5RJM6 399 aa15.48■□□□□ 0.07
PTPRE-204ENST00000455661 CKAP4Q07065 602 aaKnown RBP15.48■□□□□ 0.07
PTPRE-204ENST00000455661 UBE3CQ15386 1083 aa15.48■□□□□ 0.07
PTPRE-204ENST00000455661 RTN1Q16799 776 aa15.48■□□□□ 0.07
PTPRE-204ENST00000455661 COG1Q8WTW3 980 aa15.48■□□□□ 0.07
PTPRE-204ENST00000455661 HAUS4Q9H6D7 363 aa15.48■□□□□ 0.07
PTPRE-204ENST00000455661 CABP5Q9NP86 173 aa15.48■□□□□ 0.07
PTPRE-204ENST00000455661 MYH7P12883 1935 aa15.48■□□□□ 0.07
PTPRE-204ENST00000455661 NBPF26B4DH59 902 aa15.48■□□□□ 0.07
PTPRE-204ENST00000455661 PSMD14O00487 310 aa15.48■□□□□ 0.07
PTPRE-204ENST00000455661 KRT9P35527 623 aa15.48■□□□□ 0.07
PTPRE-204ENST00000455661 NR5A1Q13285 461 aa15.48■□□□□ 0.07
PTPRE-204ENST00000455661 KRT31Q15323 416 aa15.48■□□□□ 0.07
PTPRE-204ENST00000455661 NBPF10Q6P3W6 841 aaKnown RBP15.48■□□□□ 0.07
PTPRE-204ENST00000455661 SH3RF1Q7Z6J0 888 aa15.48■□□□□ 0.07
PTPRE-204ENST00000455661 MICALL1Q8N3F8 863 aa15.48■□□□□ 0.07
PTPRE-204ENST00000455661 NBPF15Q8N660 670 aa15.48■□□□□ 0.07
PTPRE-204ENST00000455661 DRC1Q96MC2 740 aa15.48■□□□□ 0.07
PTPRE-204ENST00000455661 ZBTB3Q9H5J0 574 aa15.48■□□□□ 0.07
PTPRE-204ENST00000455661 CNNM2Q9H8M5 875 aa15.48■□□□□ 0.07
PTPRE-204ENST00000455661 CTNND2Q9UQB3 1225 aa15.48■□□□□ 0.07
PTPRE-204ENST00000455661 SAR1BQ9Y6B6 198 aa15.48■□□□□ 0.07
PTPRE-204ENST00000455661 EPN1Q9Y6I3 576 aaPredicted RBP15.48■□□□□ 0.07
PTPRE-204ENST00000455661 CCDC196A0A1B0GTZ2 297 aa15.47■□□□□ 0.07
PTPRE-204ENST00000455661 TRIM75PA6NK02 468 aa15.47■□□□□ 0.07
PTPRE-204ENST00000455661 DPYDQ12882 1025 aa15.47■□□□□ 0.07
PTPRE-204ENST00000455661 SUGP1Q8IWZ8 645 aaKnown RBP15.47■□□□□ 0.07
PTPRE-204ENST00000455661 FAM76AQ8TAV0 307 aa15.47■□□□□ 0.07
PTPRE-204ENST00000455661 VPS16Q9H269 839 aa15.47■□□□□ 0.07
PTPRE-204ENST00000455661 RNF216Q9NWF9 866 aaPredicted RBP15.47■□□□□ 0.07
PTPRE-204ENST00000455661 ZSWIM5Q9P217 1185 aa15.47■□□□□ 0.07
PTPRE-204ENST00000455661 CDHR2Q9BYE9 1310 aa15.47■□□□□ 0.07
PTPRE-204ENST00000455661 LRRC10BA6NIK2 292 aa15.46■□□□□ 0.07
PTPRE-204ENST00000455661 IDH1O75874 414 aaKnown RBP15.46■□□□□ 0.07
PTPRE-204ENST00000455661 NDUFA10O95299 355 aa15.46■□□□□ 0.07
PTPRE-204ENST00000455661 SART3Q15020 963 aaKnown RBP15.46■□□□□ 0.07
PTPRE-204ENST00000455661 MMS22LQ6ZRQ5 1243 aa15.46■□□□□ 0.07
PTPRE-204ENST00000455661 SMYD4Q8IYR2 804 aaPredicted RBP15.46■□□□□ 0.07
PTPRE-204ENST00000455661 RBM33Q96EV2 1170 aaKnown RBP15.46■□□□□ 0.07
PTPRE-204ENST00000455661 KRT23Q9C075 422 aa15.46■□□□□ 0.07
PTPRE-204ENST00000455661 MYH8P13535 1937 aa15.46■□□□□ 0.07
PTPRE-204ENST00000455661 ATRNO75882 1429 aa15.46■□□□□ 0.07
PTPRE-204ENST00000455661 MST1RQ04912 1400 aa15.46■□□□□ 0.07
PTPRE-204ENST00000455661 MCAMP43121 646 aa15.46■□□□□ 0.07
PTPRE-204ENST00000455661 COPB1P53618 953 aaKnown RBP15.46■□□□□ 0.07
PTPRE-204ENST00000455661 TSR1Q2NL82 804 aaKnown RBP15.46■□□□□ 0.07
PTPRE-204ENST00000455661 EHBP1Q8NDI1 1231 aa15.46■□□□□ 0.07
PTPRE-204ENST00000455661 AIDAQ96BJ3 306 aa15.46■□□□□ 0.07
PTPRE-204ENST00000455661 EPSTI1Q96J88 318 aa15.46■□□□□ 0.07
PTPRE-204ENST00000455661 ZNF532Q9HCE3 1301 aa15.46■□□□□ 0.06
PTPRE-204ENST00000455661 ERICH2A1L162 156 aa15.45■□□□□ 0.06
PTPRE-204ENST00000455661 NPM3O75607 178 aaKnown RBP15.45■□□□□ 0.06
PTPRE-204ENST00000455661 GGCXP38435 758 aa15.45■□□□□ 0.06
PTPRE-204ENST00000455661 ALX1Q15699 326 aa15.45■□□□□ 0.06
PTPRE-204ENST00000455661 SKIDA1Q1XH10 827 aa15.45■□□□□ 0.06
PTPRE-204ENST00000455661 CCDC70Q6NSX1 233 aa15.45■□□□□ 0.06
PTPRE-204ENST00000455661 CRACR2BQ8N4Y2 399 aaPredicted RBP15.45■□□□□ 0.06
PTPRE-204ENST00000455661 MMS19Q96T76 1030 aa15.45■□□□□ 0.06
PTPRE-204ENST00000455661 NID2Q14112 1375 aa15.45■□□□□ 0.06
PTPRE-204ENST00000455661 TJP1Q07157 1748 aa15.45■□□□□ 0.06
PTPRE-204ENST00000455661 A0A087X0B3 334 aa15.45■□□□□ 0.06
PTPRE-204ENST00000455661 EBAG9O00559 213 aa15.45■□□□□ 0.06
PTPRE-204ENST00000455661 ENC1O14682 589 aa15.45■□□□□ 0.06
PTPRE-204ENST00000455661 SHOX2O60902 331 aaPredicted RBP15.45■□□□□ 0.06
PTPRE-204ENST00000455661 BMP15O95972 392 aa15.45■□□□□ 0.06
PTPRE-204ENST00000455661 XBP1P17861 261 aa15.45■□□□□ 0.06
PTPRE-204ENST00000455661 CASP1P29466 404 aa15.45■□□□□ 0.06
PTPRE-204ENST00000455661 IFIT5Q13325 482 aaKnown RBP15.45■□□□□ 0.06
PTPRE-204ENST00000455661 RRAGBQ5VZM2 374 aa15.45■□□□□ 0.06
PTPRE-204ENST00000455661 ANKLE2Q86XL3 938 aa15.45■□□□□ 0.06
PTPRE-204ENST00000455661 CCDC82Q8N4S0 544 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms