RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 USP17L19D6RCP7 530 aa22.81■■□□□ 1.24
MSH6-206ENST00000455383 USP17L20D6RJB6 530 aa22.81■■□□□ 1.24
MSH6-206ENST00000455383 USP17L24Q0WX57 530 aa22.81■■□□□ 1.24
MSH6-206ENST00000455383 MAP2K5Q13163 448 aa22.81■■□□□ 1.24
MSH6-206ENST00000455383 TMED8Q6PL24 325 aaPredicted RBP22.81■■□□□ 1.24
MSH6-206ENST00000455383 LBX2Q6XYB7 198 aa22.81■■□□□ 1.24
MSH6-206ENST00000455383 CATSPERGQ6ZRH7 1159 aa22.81■■□□□ 1.24
MSH6-206ENST00000455383 CCAR1Q8IX12 1150 aaKnown RBP22.81■■□□□ 1.24
MSH6-206ENST00000455383 MIGA1Q8NAN2 632 aa22.81■■□□□ 1.24
MSH6-206ENST00000455383 KIAA1683Q9H0B3 1180 aa22.81■■□□□ 1.24
MSH6-206ENST00000455383 CCDC8Q9H0W5 538 aaPredicted RBP22.81■■□□□ 1.24
MSH6-206ENST00000455383 SERPINB13Q9UIV8 391 aa22.81■■□□□ 1.24
MSH6-206ENST00000455383 MYH1P12882 1939 aa22.8■■□□□ 1.24
MSH6-206ENST00000455383 C1orf115Q9H7X2 142 aa22.8■■□□□ 1.24
MSH6-206ENST00000455383 DLL1O00548 723 aa22.79■■□□□ 1.24
MSH6-206ENST00000455383 IDH1O75874 414 aaKnown RBP22.79■■□□□ 1.24
MSH6-206ENST00000455383 USP5P45974 858 aa22.79■■□□□ 1.24
MSH6-206ENST00000455383 USP14P54578 494 aa22.79■■□□□ 1.24
MSH6-206ENST00000455383 CCNA1P78396 465 aa22.79■■□□□ 1.24
MSH6-206ENST00000455383 LRRC26Q2I0M4 334 aa22.79■■□□□ 1.24
MSH6-206ENST00000455383 MAGEB6Q8N7X4 407 aa22.79■■□□□ 1.24
MSH6-206ENST00000455383 EDC3Q96F86 508 aaKnown RBP22.79■■□□□ 1.24
MSH6-206ENST00000455383 VCAM1P19320 739 aa22.78■■□□□ 1.24
MSH6-206ENST00000455383 PTPREP23469 700 aa22.78■■□□□ 1.24
MSH6-206ENST00000455383 TTC6Q86TZ1 520 aa22.78■■□□□ 1.24
MSH6-206ENST00000455383 DEFB123Q8N688 67 aa22.78■■□□□ 1.24
MSH6-206ENST00000455383 UBE2OQ9C0C9 1292 aaKnown RBP22.78■■□□□ 1.24
MSH6-206ENST00000455383 ANTXR1Q9H6X2 564 aa22.78■■□□□ 1.24
MSH6-206ENST00000455383 FLRT1Q9NZU1 646 aa22.78■■□□□ 1.24
MSH6-206ENST00000455383 SLC15A5A6NIM6 579 aa22.77■■□□□ 1.24
MSH6-206ENST00000455383 GLRX3O76003 335 aaKnown RBP22.77■■□□□ 1.24
MSH6-206ENST00000455383 IGHA2P01877 340 aa22.77■■□□□ 1.24
MSH6-206ENST00000455383 HOXC6P09630 235 aa22.77■■□□□ 1.24
MSH6-206ENST00000455383 ZYXQ15942 572 aaKnown RBP22.77■■□□□ 1.24
MSH6-206ENST00000455383 CERKLQ49MI3 558 aaPredicted RBP22.77■■□□□ 1.24
MSH6-206ENST00000455383 ACER1Q8TDN7 264 aa22.77■■□□□ 1.24
MSH6-206ENST00000455383 FEZ1Q99689 392 aa22.77■■□□□ 1.24
MSH6-206ENST00000455383 RIOK1Q9BRS2 568 aaKnown RBP22.77■■□□□ 1.24
MSH6-206ENST00000455383 FRMPD3Q5JV73 1810 aa22.76■■□□□ 1.23
MSH6-206ENST00000455383 GUCY1A2P33402 732 aa22.76■■□□□ 1.23
MSH6-206ENST00000455383 SHMT1P34896 483 aa22.76■■□□□ 1.23
MSH6-206ENST00000455383 GRB14Q14449 540 aa22.76■■□□□ 1.23
MSH6-206ENST00000455383 RAB3GAP1Q15042 981 aa22.76■■□□□ 1.23
MSH6-206ENST00000455383 ABCB5Q2M3G0 1257 aa22.76■■□□□ 1.23
MSH6-206ENST00000455383 MTMR10Q9NXD2 777 aa22.76■■□□□ 1.23
MSH6-206ENST00000455383 BTBD7Q9P203 1132 aa22.76■■□□□ 1.23
MSH6-206ENST00000455383 NDUFB9Q9Y6M9 179 aa22.76■■□□□ 1.23
MSH6-206ENST00000455383 SPDYE16A6NNV3 312 aaPredicted RBP22.75■■□□□ 1.23
MSH6-206ENST00000455383 PLCD1P51178 756 aa22.75■■□□□ 1.23
MSH6-206ENST00000455383 GABPAQ06546 454 aa22.75■■□□□ 1.23
MSH6-206ENST00000455383 MAP3K12Q12852 859 aa22.75■■□□□ 1.23
MSH6-206ENST00000455383 MFSD14CQ5VZR4 134 aa22.75■■□□□ 1.23
MSH6-206ENST00000455383 Q7L0L9 218 aa22.75■■□□□ 1.23
MSH6-206ENST00000455383 STXBP5LQ9Y2K9 1186 aa22.75■■□□□ 1.23
MSH6-206ENST00000455383 RLBP1P12271 317 aa22.74■■□□□ 1.23
MSH6-206ENST00000455383 NPLOC4Q8TAT6 608 aa22.74■■□□□ 1.23
MSH6-206ENST00000455383 CWC22Q9HCG8 908 aaKnown RBP22.74■■□□□ 1.23
MSH6-206ENST00000455383 CABP5Q9NP86 173 aa22.74■■□□□ 1.23
MSH6-206ENST00000455383 DDX20Q9UHI6 824 aaKnown RBP22.74■■□□□ 1.23
MSH6-206ENST00000455383 MSCO60682 206 aa22.73■■□□□ 1.23
MSH6-206ENST00000455383 CEP85Q6P2H3 762 aa22.73■■□□□ 1.23
MSH6-206ENST00000455383 LPAR1Q92633 364 aa22.73■■□□□ 1.23
MSH6-206ENST00000455383 ITPRIPQ8IWB1 547 aa22.72■■□□□ 1.23
MSH6-206ENST00000455383 RPAP3Q9H6T3 665 aaPredicted RBP22.72■■□□□ 1.23
MSH6-206ENST00000455383 WDR78Q5VTH9 848 aa22.71■■□□□ 1.23
MSH6-206ENST00000455383 FTSJ3Q8IY81 847 aaKnown RBP22.71■■□□□ 1.23
MSH6-206ENST00000455383 TRPV1Q8NER1 839 aa22.71■■□□□ 1.23
MSH6-206ENST00000455383 SENP6Q9GZR1 1112 aaPredicted RBP22.71■■□□□ 1.23
MSH6-206ENST00000455383 IVNS1ABPQ9Y6Y0 642 aa22.71■■□□□ 1.23
MSH6-206ENST00000455383 A0A1W2PRG0 241 aa22.7■■□□□ 1.22
MSH6-206ENST00000455383 MDM2Q00987 491 aaPredicted RBP22.7■■□□□ 1.22
MSH6-206ENST00000455383 ATP2B2Q01814 1243 aa22.7■■□□□ 1.22
MSH6-206ENST00000455383 SEPT2Q15019 361 aa22.7■■□□□ 1.22
MSH6-206ENST00000455383 AACSQ86V21 672 aa22.7■■□□□ 1.22
MSH6-206ENST00000455383 ERC1Q8IUD2 1116 aa22.7■■□□□ 1.22
MSH6-206ENST00000455383 A0A0C4DFX4 3053 aa22.69■■□□□ 1.22
MSH6-206ENST00000455383 ZNF236Q9UL36 1845 aa22.69■■□□□ 1.22
MSH6-206ENST00000455383 MAGEB6P1A0A0J9YX57 407 aa22.69■■□□□ 1.22
MSH6-206ENST00000455383 DNM1LO00429 736 aa22.69■■□□□ 1.22
MSH6-206ENST00000455383 CYBAP13498 195 aa22.69■■□□□ 1.22
MSH6-206ENST00000455383 CYP2C19P33261 490 aa22.69■■□□□ 1.22
MSH6-206ENST00000455383 EXOC6BQ9Y2D4 811 aa22.69■■□□□ 1.22
MSH6-206ENST00000455383 STRNO43815 780 aa22.68■■□□□ 1.22
MSH6-206ENST00000455383 POLR3DP05423 398 aaPredicted RBP22.68■■□□□ 1.22
MSH6-206ENST00000455383 EVX2Q03828 476 aa22.68■■□□□ 1.22
MSH6-206ENST00000455383 COG2Q14746 738 aa22.68■■□□□ 1.22
MSH6-206ENST00000455383 TTF1Q15361 905 aaPredicted RBP22.68■■□□□ 1.22
MSH6-206ENST00000455383 OLFML2BQ68BL8 750 aa22.68■■□□□ 1.22
MSH6-206ENST00000455383 FAM109BQ6ICB4 259 aaPredicted RBP22.68■■□□□ 1.22
MSH6-206ENST00000455383 SHCBP1Q8NEM2 672 aa22.68■■□□□ 1.22
MSH6-206ENST00000455383 MOV10L1Q9BXT6 1211 aaKnown RBP22.68■■□□□ 1.22
MSH6-206ENST00000455383 HOXC10Q9NYD6 342 aa22.68■■□□□ 1.22
MSH6-206ENST00000455383 RLFQ13129 1914 aa22.68■■□□□ 1.22
MSH6-206ENST00000455383 NAV1Q8NEY1 1877 aa22.67■■□□□ 1.22
MSH6-206ENST00000455383 POTEB2H3BUK9 544 aa22.67■■□□□ 1.22
MSH6-206ENST00000455383 PDE6AP16499 860 aa22.67■■□□□ 1.22
MSH6-206ENST00000455383 CRNKL1Q9BZJ0 848 aaKnown RBP22.67■■□□□ 1.22
MSH6-206ENST00000455383 A0A0G2JMZ2 1700 aa22.67■■□□□ 1.22
MSH6-206ENST00000455383 TCRBV5S4A2TA0A5A2 114 aa22.66■■□□□ 1.22
MSH6-206ENST00000455383 CNGA1P29973 690 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms