RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 SLITRK5O94991 958 aa6.49□□□□□ -1.37
LINC00393-202ENST00000452852 BPNT1O95861 308 aa6.49□□□□□ -1.37
LINC00393-202ENST00000452852 EOMESO95936 686 aa6.49□□□□□ -1.37
LINC00393-202ENST00000452852 PRNPP04156 253 aa6.49□□□□□ -1.37
LINC00393-202ENST00000452852 PGRP06401 933 aa6.49□□□□□ -1.37
LINC00393-202ENST00000452852 GARTP22102 1010 aa6.49□□□□□ -1.37
LINC00393-202ENST00000452852 CAP2P40123 477 aa6.49□□□□□ -1.37
LINC00393-202ENST00000452852 FANCCQ00597 558 aa6.49□□□□□ -1.37
LINC00393-202ENST00000452852 SNAP47Q5SQN1 464 aa6.49□□□□□ -1.37
LINC00393-202ENST00000452852 DIEXFQ68CQ4 756 aaKnown RBP6.49□□□□□ -1.37
LINC00393-202ENST00000452852 HS2ST1Q7LGA3 356 aa6.49□□□□□ -1.37
LINC00393-202ENST00000452852 PLD6Q8N2A8 252 aaKnown RBP6.49□□□□□ -1.37
LINC00393-202ENST00000452852 GOLM1Q8NBJ4 401 aa6.49□□□□□ -1.37
LINC00393-202ENST00000452852 UBXN4Q92575 508 aa6.49□□□□□ -1.37
LINC00393-202ENST00000452852 RNF34Q969K3 372 aa6.49□□□□□ -1.37
LINC00393-202ENST00000452852 TJP2Q9UDY2 1190 aa6.49□□□□□ -1.37
LINC00393-202ENST00000452852 CCDC39Q9UFE4 941 aa6.49□□□□□ -1.37
LINC00393-202ENST00000452852 BIVM-ERCC5R4GMW8 1640 aa6.48□□□□□ -1.37
LINC00393-202ENST00000452852 SMARCA5O60264 1052 aaPredicted RBP6.48□□□□□ -1.37
LINC00393-202ENST00000452852 OXCT1P55809 520 aa6.48□□□□□ -1.37
LINC00393-202ENST00000452852 PDE4BQ07343 736 aa6.48□□□□□ -1.37
LINC00393-202ENST00000452852 PRAMEF13Q5VWM6 474 aa6.48□□□□□ -1.37
LINC00393-202ENST00000452852 FBXL19Q6PCT2 694 aa6.48□□□□□ -1.37
LINC00393-202ENST00000452852 XAGE3Q8WTP9 111 aa6.48□□□□□ -1.37
LINC00393-202ENST00000452852 ANGEL1Q9UNK9 670 aaKnown RBP6.48□□□□□ -1.37
LINC00393-202ENST00000452852 CORINQ9Y5Q5 1042 aa6.48□□□□□ -1.37
LINC00393-202ENST00000452852 ABCA10Q8WWZ4 1543 aa6.48□□□□□ -1.37
LINC00393-202ENST00000452852 CST3P01034 146 aaPredicted RBP6.47□□□□□ -1.37
LINC00393-202ENST00000452852 HSP90B1P14625 803 aaKnown RBP6.47□□□□□ -1.37
LINC00393-202ENST00000452852 NFXL1Q6ZNB6 911 aa6.47□□□□□ -1.37
LINC00393-202ENST00000452852 ARHGAP27Q6ZUM4 889 aa6.47□□□□□ -1.37
LINC00393-202ENST00000452852 VSIG10LQ86VR7 867 aa6.47□□□□□ -1.37
LINC00393-202ENST00000452852 MRPL41Q8IXM3 137 aaKnown RBP6.47□□□□□ -1.37
LINC00393-202ENST00000452852 MFSD2AQ8NA29 543 aa6.47□□□□□ -1.37
LINC00393-202ENST00000452852 FBXO27Q8NI29 283 aa6.47□□□□□ -1.37
LINC00393-202ENST00000452852 RIN3Q8TB24 985 aa6.47□□□□□ -1.37
LINC00393-202ENST00000452852 NETO1Q8TDF5 533 aa6.47□□□□□ -1.37
LINC00393-202ENST00000452852 ACSF2Q96CM8 615 aaPredicted RBP6.47□□□□□ -1.37
LINC00393-202ENST00000452852 TMEM87BQ96K49 555 aa6.47□□□□□ -1.37
LINC00393-202ENST00000452852 MIPEPQ99797 713 aa6.47□□□□□ -1.37
LINC00393-202ENST00000452852 DPH2Q9BQC3 489 aaPredicted RBP6.47□□□□□ -1.37
LINC00393-202ENST00000452852 TANGO6Q9C0B7 1094 aa6.47□□□□□ -1.37
LINC00393-202ENST00000452852 ACBD3Q9H3P7 528 aa6.47□□□□□ -1.37
LINC00393-202ENST00000452852 MKNK2Q9HBH9 465 aa6.47□□□□□ -1.37
LINC00393-202ENST00000452852 CAPN10Q9HC96 672 aa6.47□□□□□ -1.37
LINC00393-202ENST00000452852 GTF2IRD1Q9UHL9 959 aa6.47□□□□□ -1.37
LINC00393-202ENST00000452852 PLAGL2Q9UPG8 496 aa6.47□□□□□ -1.37
LINC00393-202ENST00000452852 TOP2BQ02880 1626 aa6.47□□□□□ -1.37
LINC00393-202ENST00000452852 TLR3O15455 904 aaKnown RBP6.46□□□□□ -1.38
LINC00393-202ENST00000452852 CEACAM5P06731 702 aa6.46□□□□□ -1.38
LINC00393-202ENST00000452852 PLCG1P19174 1290 aa6.46□□□□□ -1.38
LINC00393-202ENST00000452852 ITIH2P19823 946 aa6.46□□□□□ -1.38
LINC00393-202ENST00000452852 ZNF76P36508 570 aa6.46□□□□□ -1.38
LINC00393-202ENST00000452852 EIF4A3P38919 411 aaKnown RBP6.46□□□□□ -1.38
LINC00393-202ENST00000452852 WRNQ14191 1432 aaPredicted RBP eCLIP6.46□□□□□ -1.38
LINC00393-202ENST00000452852 FAM196AQ6ZSG2 479 aa6.46□□□□□ -1.38
LINC00393-202ENST00000452852 MCATQ8IVS2 390 aaKnown RBP6.46□□□□□ -1.38
LINC00393-202ENST00000452852 BCL7CQ8WUZ0 217 aaPredicted RBP6.46□□□□□ -1.38
LINC00393-202ENST00000452852 TINF2Q9BSI4 451 aa6.46□□□□□ -1.38
LINC00393-202ENST00000452852 CCSER2Q9H7U1 834 aa6.46□□□□□ -1.38
LINC00393-202ENST00000452852 KCNQ5Q9NR82 932 aa6.46□□□□□ -1.38
LINC00393-202ENST00000452852 ADAM30Q9UKF2 790 aa6.46□□□□□ -1.38
LINC00393-202ENST00000452852 POLR3KQ9Y2Y1 108 aaPredicted RBP6.46□□□□□ -1.38
LINC00393-202ENST00000452852 CNTNAP4Q9C0A0 1308 aa6.46□□□□□ -1.38
LINC00393-202ENST00000452852 IGF2BP3O00425 579 aaKnown RBP eCLIP6.45□□□□□ -1.38
LINC00393-202ENST00000452852 GRIN3BO60391 1043 aa6.45□□□□□ -1.38
LINC00393-202ENST00000452852 GREM1O60565 184 aa6.45□□□□□ -1.38
LINC00393-202ENST00000452852 HMGB1P09429 215 aaKnown RBP6.45□□□□□ -1.38
LINC00393-202ENST00000452852 TNNI2P48788 182 aa6.45□□□□□ -1.38
LINC00393-202ENST00000452852 BNIP3Q12983 259 aa6.45□□□□□ -1.38
LINC00393-202ENST00000452852 MPP2Q14168 576 aa6.45□□□□□ -1.38
LINC00393-202ENST00000452852 IFI16Q16666 785 aaKnown RBP6.45□□□□□ -1.38
LINC00393-202ENST00000452852 SLC6A19Q695T7 634 aa6.45□□□□□ -1.38
LINC00393-202ENST00000452852 LETMD1Q6P1Q0 360 aa6.45□□□□□ -1.38
LINC00393-202ENST00000452852 REC114Q7Z4M0 266 aa6.45□□□□□ -1.38
LINC00393-202ENST00000452852 FLCNQ8NFG4 579 aa6.45□□□□□ -1.38
LINC00393-202ENST00000452852 ZNF296Q8WUU4 475 aaPredicted RBP6.45□□□□□ -1.38
LINC00393-202ENST00000452852 TGIF2Q9GZN2 237 aa6.45□□□□□ -1.38
LINC00393-202ENST00000452852 PRDM5Q9NQX1 630 aaPredicted RBP6.45□□□□□ -1.38
LINC00393-202ENST00000452852 METTL5Q9NRN9 209 aaKnown RBP6.45□□□□□ -1.38
LINC00393-202ENST00000452852 ADAMTS1Q9UHI8 967 aa6.45□□□□□ -1.38
LINC00393-202ENST00000452852 TPX2Q9ULW0 747 aaKnown RBP6.45□□□□□ -1.38
LINC00393-202ENST00000452852 SUPT16HQ9Y5B9 1047 aaKnown RBP6.45□□□□□ -1.38
LINC00393-202ENST00000452852 ADAMTS12P58397 1594 aa6.44□□□□□ -1.38
LINC00393-202ENST00000452852 UPK3BL1B0FP48 263 aa6.44□□□□□ -1.38
LINC00393-202ENST00000452852 UPK3BL2E5RIL1 263 aa6.44□□□□□ -1.38
LINC00393-202ENST00000452852 RBAK-RBAKDNI3L0D1 243 aa6.44□□□□□ -1.38
LINC00393-202ENST00000452852 ZNF574Q6ZN55 896 aaPredicted RBP6.44□□□□□ -1.38
LINC00393-202ENST00000452852 SPRED2Q7Z698 418 aa6.44□□□□□ -1.38
LINC00393-202ENST00000452852 TP53INP2Q8IXH6 220 aa6.44□□□□□ -1.38
LINC00393-202ENST00000452852 DHX38Q92620 1227 aaKnown RBP6.44□□□□□ -1.38
LINC00393-202ENST00000452852 FBXL18Q96ME1 805 aa6.44□□□□□ -1.38
LINC00393-202ENST00000452852 DNAJC2Q99543 621 aaKnown RBP6.44□□□□□ -1.38
LINC00393-202ENST00000452852 MAPK8IP1Q9UQF2 711 aa6.44□□□□□ -1.38
LINC00393-202ENST00000452852 SLC5A6Q9Y289 635 aa6.44□□□□□ -1.38
LINC00393-202ENST00000452852 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.44□□□□□ -1.38
LINC00393-202ENST00000452852 GRIN2AQ12879 1464 aa6.43□□□□□ -1.38
LINC00393-202ENST00000452852 PRKCQQ04759 706 aa6.43□□□□□ -1.38
LINC00393-202ENST00000452852 TMEM201Q5SNT2 666 aa6.43□□□□□ -1.38
LINC00393-202ENST00000452852 DPH6Q7L8W6 267 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms